Thermoclostridium stercorarium subsp. stercorarium DSM 8532: Cst_c02550
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Entry
Cst_c02550 CDS
T02440
Name
(GenBank) N-glycosylase/DNA lyase
KO
K03660
N-glycosylase/DNA lyase [EC:3.2.2.-
4.2.99.18
]
Organism
css
Thermoclostridium stercorarium subsp. stercorarium DSM 8532
Pathway
css03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
css00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
Cst_c02550
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
css03400
]
Cst_c02550
Enzymes [BR:
css01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
Cst_c02550
DNA repair and recombination proteins [BR:
css03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
Cst_c02550
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OGG_N
HhH-GPD
DUF4535
HHH
Motif
Other DBs
NCBI-ProteinID:
AGC67279
UniProt:
L7VKT9
LinkDB
All DBs
Position
complement(280443..281315)
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AA seq
290 aa
AA seq
DB search
MYRIISTDNNNLTVRIDDFNPSHTFLCGQCFRWNQEDEGTWSGVALGRFVRLKWDGELCT
FFDMTEKEFIEKWVDYFDLNTDYGEIKKILAGKDEHLREAVSFGYGIRLLRQDLWEVMLS
FIISQNNQIPRIKKIIETLSEHYGQKISGADNRYTFPDAFSLARANIEDLKICRPGYRLG
YIMSAAEKVSKSPSLLGELKSIPSAEARKILLSFTGIGEKVADCILLYSGLDRNAFPIDR
WVKRVMETLYFKKETDVKTIRAFSRDYFGELSGIAQQYLFYYARENKIGL
NT seq
873 nt
NT seq
+upstream
nt +downstream
nt
atgtaccgtattatttcaacagacaataataatcttacggttcggatagatgattttaat
ccctcccatacttttctgtgcggacaatgtttccgctggaatcaggaagacgaagggaca
tggtccggcgttgccctcggccgtttcgttaggcttaaatgggacggcgaattatgcaca
ttttttgacatgaccgaaaaggaattcattgaaaaatgggtggattattttgatcttaat
accgattacggagaaataaaaaaaattctcgccggcaaggatgaacatttaagggaagcg
gtatccttcggctacgggatacgccttctgcgccaggatctgtgggaggtaatgctgtca
tttatcatatcccagaacaaccaaataccaaggataaaaaaaataatagaaacactgagc
gagcattacgggcagaaaatttccggcgcagacaacaggtacaccttcccagacgctttt
tcccttgcccgtgcaaacattgaagaccttaagatatgccgtccgggttaccgcctgggg
tatatcatgtctgcggcagaaaaggtgtcgaaatcgccttcgcttcttggggaactgaaa
agcattccctccgctgaagcgcggaaaatacttctgtcttttacaggaataggagaaaag
gttgccgactgtattcttctttacagcgggcttgacaggaacgccttcccgattgacagg
tgggtgaaacgggtaatggaaaccctgtactttaaaaaggaaaccgatgtaaagacaatc
cgcgccttttcacgggattatttcggagaactttcgggcattgcgcagcagtatcttttt
tactacgcccgcgagaacaaaatcggtttgtga
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