Thermoclostridium stercorarium subsp. stercorarium DSM 8532: Cst_c14590
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Entry
Cst_c14590 CDS
T02440
Symbol
yhaM
Name
(GenBank) 3'-5' exoribonuclease YhaM
KO
K03698
3'-5' exoribonuclease [EC:3.1.-.-]
Organism
css
Thermoclostridium stercorarium subsp. stercorarium DSM 8532
Brite
KEGG Orthology (KO) [BR:
css00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
css03019
]
Cst_c14590 (yhaM)
Messenger RNA biogenesis [BR:
css03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
Cst_c14590 (yhaM)
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GFIT
Motif
Pfam:
HD
tRNA_anti-codon
OB_Ssb-like
TraI_2
Motif
Other DBs
NCBI-ProteinID:
AGC68448
UniProt:
L7VS92
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All DBs
Position
complement(1580649..1581611)
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AA seq
320 aa
AA seq
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MRFVGVAIKDLKLGETINGIYILRKKELKEASNKKPFIDVVFSDNTGEIPAKIWDAGEDV
YNKLQLNMLYYVNAKVDCFKDMMQLTINKMRIADPEDQKEIDKFVPSAPIPAGDMLNEIY
EYAYRITNEEIRKLVLKLLKDKEEKLVYYPAAKSLHHSIRSGLLYHILRMLRLSEKLKEI
YEEINLDLLYAGVLIHDLAKIGELEANELGISEYSKEGQLLGHIVMGICEIERAGNELGI
SPEVMLLLKHMVLSHHYEAEYGSPKRPMFLEAELLHFIDMIDARVYDYVNNLKNVEEGGF
SDPVWSLDRRRLYKPQLHKE
NT seq
963 nt
NT seq
+upstream
nt +downstream
nt
atgaggtttgttggagtagcaataaaagatttgaagctgggagagacaattaacgggata
tacatacttcgtaagaaggaacttaaagaggcatcaaacaaaaaaccgtttattgatgtg
gttttttctgacaataccggtgaaattccggcaaagatctgggatgccggcgaagatgtt
tataataaactgcaactgaacatgctttattatgtcaatgcaaaagttgactgtttcaaa
gacatgatgcagcttacaataaataaaatgcgtatagctgatcccgaggaccagaaagag
atagacaagttcgtgccctcggcaccaattcccgccggcgatatgctgaatgaaatatat
gagtatgcatacagaattacaaacgaagagattcgaaaactggtattgaaacttttgaaa
gacaaggaagaaaaacttgtttattatccggctgcaaaatcattgcatcattcaatccgc
agcgggcttttgtatcatattctcagaatgcttcgcctgtcggaaaaattgaaggaaata
tacgaggaaataaaccttgacttactgtatgcaggtgttttaattcatgaccttgccaaa
ataggagaactggaagccaatgaattgggaatttcggaatattctaaggaaggtcagctt
ctgggccatatagtaatgggaatttgcgaaatagaacgggccggaaatgaactgggcatt
tctcccgaagtgatgttgctcctgaagcatatggttttaagccatcactatgaagccgag
tatggaagtccgaaaagaccgatgttccttgaagcggagttgctgcatttcattgatatg
atagatgcgagggtttatgattatgtaaataatctgaaaaacgttgaggaaggcggtttt
tccgatcctgtatggtctcttgacagaagaagattgtataaaccacaattgcacaaagaa
taa
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