Thermoclostridium stercorarium subsp. stercorarium DSM 8532: Cst_c15090
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Entry
Cst_c15090 CDS
T02440
Symbol
ispH
Name
(GenBank) 4-hydroxy-3-methylbut-2-enyl diphosphate reductase IspH
KO
K02945
small subunit ribosomal protein S1
K03527
4-hydroxy-3-methylbut-2-en-1-yl diphosphate reductase [EC:
1.17.7.4
]
Organism
css
Thermoclostridium stercorarium subsp. stercorarium DSM 8532
Pathway
css00900
Terpenoid backbone biosynthesis
css01100
Metabolic pathways
css01110
Biosynthesis of secondary metabolites
css03010
Ribosome
Brite
KEGG Orthology (KO) [BR:
css00001
]
09100 Metabolism
09109 Metabolism of terpenoids and polyketides
00900 Terpenoid backbone biosynthesis
Cst_c15090 (ispH)
09120 Genetic Information Processing
09122 Translation
03010 Ribosome
Cst_c15090 (ispH)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03011 Ribosome [BR:
css03011
]
Cst_c15090 (ispH)
Enzymes [BR:
css01000
]
1. Oxidoreductases
1.17 Acting on CH or CH2 groups
1.17.7 With an iron-sulfur protein as acceptor
1.17.7.4 4-hydroxy-3-methylbut-2-en-1-yl diphosphate reductase
Cst_c15090 (ispH)
Ribosome [BR:
css03011
]
Ribosomal proteins
Mitochondria/ Chloroplast
Small subunit
Cst_c15090 (ispH)
Bacteria
Cst_c15090 (ispH)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LYTB
S1
S1_RRP5
Spt6_S1
OB_RRP5_4th
CvfB_2nd
S1_2
KYNU_C
Motif
Other DBs
NCBI-ProteinID:
AGC68497
UniProt:
L7VNY7
LinkDB
All DBs
Position
complement(1632196..1634232)
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AA seq
678 aa
AA seq
DB search
MAEFIVAKTAGFCFGVDNAVKLAFRISEENPGNTSTLGEIIHNRQVMEELAQRGVKVVES
PDELKEGEHVIIRAHGIGEAVYNELKKRNVIIHDATCPYVKRIHKLVRQKHAEGCTIIIV
GDRNHPEIIGVNGWCDNRAYVVSSIEEVDLLPDISGPICVFAQTTMKQEKFDGIYEAVKK
KFANTQKFDTICNATEVRQREAREISGTVDMMIVIGGKNSSNTQKLFEICSENCPLTFKI
ETVADLPPLDIKNINTIGITAGASTPDWVIREVIETMEENLRNQEQEMSFKEAFEAYESE
TGDLRAGEIVKGRIIGYNTSEVFVDLGYKSDGTIPLEEFLDDPDFDPEKDLKEGDEILVY
ITRVNDMEGTVSLSKRKVDLIYGMEEIEKAYNEKKPLEAVVKEVVNGGVVANYKGIRVFI
PASQISDQYVKDLNQFLNKKVKFEVLELSKNKRRVVGSRKNVLEKEKAQKLEEFWNNIEI
GKEYTGTVKSLTNFGAFIDLGAVDGLVHISELSWKKVNKPSDILKVGQTVKARVIGFDKE
KQKVSLSLKRPEDNPWYNIEKKYSVGDVVEGKIIRLVPFGAFVELEEGVEGLVHISQISN
VHLAKPDEVLSVGQVVKMKVLEVNPELKKISLSIREVEPLDPKRAGGNNNEAAAENTEDI
PTSHVEELKTTIADFIKE
NT seq
2037 nt
NT seq
+upstream
nt +downstream
nt
atggctgaatttatagtggcaaaaaccgcgggattttgttttggtgttgacaacgccgtg
aaacttgcatttcggatatcggaagagaatccgggaaacacaagcacgttgggagaaata
attcacaacagacaggtaatggaagagcttgcgcaaaggggcgtaaaggttgtcgaaagt
ccggacgaactgaaggaaggcgagcatgtaattatacgcgcccacggcattggtgaggcc
gtatacaatgagttaaaaaaaagaaatgttattatacatgatgccacttgtccatatgtg
aaaagaatacataaactggtcaggcaaaaacatgcggagggttgcacaatcataatagtc
ggagacagaaatcatccggaaataataggcgtcaacggatggtgcgacaacagggcgtac
gtggtttccagtattgaggaagtggatttgttacctgacatttccggtcctatatgtgtt
tttgcccagaccacaatgaaacaggaaaagtttgacgggatttatgaagctgtaaagaaa
aagtttgcaaatacccagaaatttgatacaatatgtaatgcgactgaagtgcggcaacgg
gaagctcgcgaaatctccggaacggttgacatgatgattgttattggcggcaaaaacagc
tccaatacgcaaaaactgtttgaaatatgttcagagaactgcccgttgacctttaagatc
gaaacagtggcggatttacccccattggatataaagaatatcaacactattgggattacc
gcgggggcttctacgcctgactgggtaatcagggaggttattgaaacaatggaagaaaat
ttgaggaatcaggaacaggaaatgtctttcaaagaggcttttgaggcctatgaatcggag
acaggcgatctgcgggcaggtgaaattgtcaaaggtcgcataattggttacaataccagt
gaggttttcgttgaccttgggtataagtcggacggaacaataccgctggaagaattcctg
gatgatcccgattttgaccctgaaaaggatttgaaagaaggggacgaaatcctcgtatat
ataacccgtgtaaacgatatggaaggaactgtgtctctttcaaagagaaaagttgacctt
atttacgggatggaagagattgagaaagcctataatgaaaaaaagcctcttgaagcggtt
gtaaaagaagtggtaaacggcggtgtggtggccaattataaaggtatccgtgtgtttata
cccgcttcgcagatttccgatcagtacgtaaaggatttgaatcagttcctgaataaaaaa
gtgaaatttgaagtactggagttgtcgaaaaataaacgcagagtagtcggttcccgtaaa
aacgttctggaaaaagaaaaggcacaaaaacttgaagagttctggaataatatagaaata
ggaaaagaatatacaggaacggttaaaagccttaccaatttcggcgcttttattgatctc
ggtgctgttgacgggttggtccatatttctgaattatcatggaaaaaggtaaataaacca
tccgatatactgaaagtcggtcagaccgttaaagccagggttataggctttgacaaggaa
aagcagaaggtatccctaagcttaaagcggcccgaagataatccgtggtacaatattgag
aagaaatattcggttggagatgtggtggaagggaaaataatccgtcttgtaccctttggt
gcttttgttgagctggaagagggtgttgagggcctggttcacatctcacaaatttccaat
gtgcatttggcaaaacccgatgaagtgctttcggttggtcaggttgtaaaaatgaaagtt
cttgaggtaaatcccgaattaaagaaaatcagtctcagcattcgggaagtagagcctctg
gatccgaaacgggcaggcggaaataacaatgaggccgctgccgaaaataccgaagatatt
cccacttctcacgttgaggaattgaaaaccaccatcgcagattttataaaagaatag
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