Thermoclostridium stercorarium subsp. stercorarium DSM 8532: Cst_c16740
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Entry
Cst_c16740 CDS
T02440
Symbol
lcfB
Name
(GenBank) long-chain-fatty-acid--CoA ligase LcfB
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
css
Thermoclostridium stercorarium subsp. stercorarium DSM 8532
Pathway
css00061
Fatty acid biosynthesis
css00071
Fatty acid degradation
css01100
Metabolic pathways
css01212
Fatty acid metabolism
css02024
Quorum sensing
css04146
Peroxisome
Module
css_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
css00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
Cst_c16740 (lcfB)
00071 Fatty acid degradation
Cst_c16740 (lcfB)
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
Cst_c16740 (lcfB)
09145 Cellular community - prokaryotes
02024 Quorum sensing
Cst_c16740 (lcfB)
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
css01004
]
Cst_c16740 (lcfB)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
css04147
]
Cst_c16740 (lcfB)
Enzymes [BR:
css01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
Cst_c16740 (lcfB)
Lipid biosynthesis proteins [BR:
css01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
Cst_c16740 (lcfB)
Exosome [BR:
css04147
]
Exosomal proteins
Exosomal proteins of breast milk
Cst_c16740 (lcfB)
Exosomal proteins of breast cancer cells
Cst_c16740 (lcfB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C
AMP-binding_C_3
AMP-binding_C_2
Motif
Other DBs
NCBI-ProteinID:
AGC68658
UniProt:
L7VT13
LinkDB
All DBs
Position
complement(1814087..1815721)
Genome browser
AA seq
544 aa
AA seq
DB search
MPITEFLERNARLYGDEKCLTEINMEVQGKKNVTWLEYELIENSPSGSYRREMTWREFDE
KANRLANLLLKRGIKKGDKVAILLMNCIEWLPIYFGILKAGAVAVPLNFRYTAEEIRYCL
NLSDAVALIFGPEFTERIELIYQDIPAVKMFIYVGEKTPSFAESYERLTAVCPAEAPKVD
ISDDDDAAIYYSSGTTGFPKAILHAHRSLVSACYTEQKHHGQTREDNFLCIPPLYHTGAK
MHWFGSLISGSRAVLLRGVKPEWILKTVSEEKITIVWLLVPWAQDILDAIERGDINLHDY
DLSSWRLMHIGAQPVPPSLICRWKKYFPNHLYDTNYGLSESTGPGCVHLGVENIHKVGAI
GKPGYNWEAKIVDEDGNPVPQGEIGELAVKGPGVMKCYYKDPKATEEVLKDGWLLTGDMA
RMDEDGFIYLVDRKKDVIISGGENIYPVQVEDFLRAHNGIKDAAVIGLPDRRQGEIVAAI
IETKPGINLTEKDIIEYCRDLPRYKRPRKIIFDKVPRNPTGKIEKPLLRAKYGATQIVAT
QTQL
NT seq
1635 nt
NT seq
+upstream
nt +downstream
nt
atgcccattaccgaatttctggagcgaaatgccaggttatatggcgacgaaaaatgtctt
accgaaataaacatggaggttcagggaaaaaagaatgtaacctggcttgaatatgaactt
atagaaaacagtccctcaggttcataccggagggagatgacgtggagagaatttgacgag
aaagcaaaccggcttgcgaatttgttgttaaaacgtgggataaagaagggggataaggta
gccatccttttaatgaactgtattgagtggcttcctatatacttcggaatacttaaagca
ggcgcggtggcggtaccgttgaatttcagatatacggcagaagaaataaggtattgtcta
aatttgtcggatgcggttgcacttattttcggacctgagtttacagaacgtatcgagttg
atttatcaggatattcctgctgtaaaaatgttcatttatgtaggggaaaagacaccgtca
tttgcggagagctatgaaaggcttacggctgtctgcccggcggaagcgccaaaggtagac
atatccgacgatgacgatgctgcaatctactattcgtcgggtacaacaggttttccaaaa
gcaattttgcatgcgcacagaagccttgtatcggcttgttacacagagcagaaacatcat
gggcagacgcgggaagataattttctgtgcatacctccgctttatcatacaggcgctaaa
atgcactggtttggaagtctcatatcgggaagcagggcggttttgcttcggggtgtgaaa
cccgaatggattctgaagaccgtatcagaagagaaaattacaatagtttggcttctggta
ccctgggcccaggatatacttgacgcaattgagcgaggtgacataaacctccatgattat
gatttgtcgtcatggcggcttatgcatatcggggcgcagcctgttccgcccagtttaatc
tgcaggtggaaaaagtattttccaaaccacctttatgacacaaactatgggcttagtgaa
tcaaccggacctggatgtgtgcatttgggtgttgagaatatacataaagttggcgcaata
gggaaaccgggatataactgggaagccaaaatagttgatgaggacggaaacccggtacct
cagggtgaaataggcgagctggctgttaaaggcccgggggttatgaaatgctactacaag
gatccgaaagccacagaagaggtcttgaaggacggatggcttctgaccggtgacatggcg
cgcatggatgaagacggtttcatttacctggttgacaggaaaaaagatgttattataagc
ggtggcgaaaatatatatcctgttcaggttgaagatttccttcgtgcccacaacggaatt
aaagatgccgcagtcataggccttcctgatcgaagacagggagaaatagtcgcggcaatt
atagaaacaaaaccaggtataaatttaaccgaaaaggatataattgaatattgccgggac
ttaccgcgttataaacggccaaggaagataatttttgacaaggtcccgagaaatcctacg
ggcaaaattgaaaagccactgcttagagcaaagtatggagctacgcaaatagtagcaacc
caaacacaactgtag
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