KEGG   Thermoclostridium stercorarium subsp. stercorarium DSM 8532: Cst_c16800
Entry
Cst_c16800        CDS       T02440                                 
Symbol
cas6
Name
(GenBank) CRISPR-associated endoribonuclease Cas6
  KO
K19091  CRISPR-associated endoribonuclease Cas6 [EC:3.1.-.-]
Organism
css  Thermoclostridium stercorarium subsp. stercorarium DSM 8532
Brite
KEGG Orthology (KO) [BR:css00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02048 Prokaryotic defense system [BR:css02048]
    Cst_c16800 (cas6)
Prokaryotic defense system [BR:css02048]
 CRISPR-Cas system
  Type I CRISPR-Cas system
   Subtype I-A factors
    Cst_c16800 (cas6)
   Subtype I-D factors
    Cst_c16800 (cas6)
SSDB
Motif
Pfam: Cas_Cas6_C Cas6_I-A
Other DBs
NCBI-ProteinID: AGC68664
UniProt: L7VPR9
LinkDB
Position
complement(1820676..1821404)
AA seq 242 aa
MHICIRLNAANDIVLPVHYNHIVQGFIYNMIDRELAEFLHSKGYGEGRKFKLFCFSNILG
KSNIDSANGTITFKPPIKLEVSSPDEYFCESFANTVLKKEAKLGKNLLEIESIEISRQDV
LDNKIVLKTLSPITAYSTLLRPDQRKYTCFFQPGEEDFNRIVEENLRKKYRAYTGMQPPE
EKVWFSPITQPRLHIVKYKGYIVKGYTCRLSVEGPRELLQMAVDAGLGGKNSQGFGCVKL
AE
NT seq 729 nt   +upstreamnt  +downstreamnt
atgcatatatgtatacggctgaatgcggcaaatgacattgttttgcccgttcattacaac
catattgtgcagggctttatttataacatgatagacagggaactggcggaatttttgcac
agcaaaggctatggtgaaggaaggaagtttaaattattctgtttttcgaatattttggga
aagtcaaatatagacagtgcgaacggcactattacattcaaacccccgataaaacttgaa
gtatcgtcgcccgacgaatatttctgtgaatcttttgcgaacacggttttaaaaaaggaa
gcgaagctgggcaaaaaccttcttgagattgaaagcattgaaataagccggcaggacgta
cttgataacaaaatagtgctgaaaacgctgtctccgataacggcatacagtactttgtta
aggcccgatcagagaaagtatacatgcttttttcagcccggtgaagaagattttaacagg
atcgttgaagaaaatcttcggaaaaaatacagggcgtacacaggaatgcaaccgcctgaa
gaaaaggtatggttcagtccgataacccagccaaggctgcatatagtaaaatacaagggc
tacattgtaaaggggtatacatgcaggctgagtgttgaagggcctcgcgaacttctccag
atggctgtggacgcgggactgggcggcaaaaacagccaggggtttggctgtgtgaaactg
gcggaatag

DBGET integrated database retrieval system