Thermoclostridium stercorarium subsp. stercorarium DSM 8532: Cst_c19540
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Entry
Cst_c19540 CDS
T02440
Symbol
rumA
Name
(GenBank) 23S rRNA (uracil-5-)-methyltransferase RumA
KO
K03215
23S rRNA (uracil1939-C5)-methyltransferase [EC:
2.1.1.190
]
Organism
css
Thermoclostridium stercorarium subsp. stercorarium DSM 8532
Brite
KEGG Orthology (KO) [BR:
css00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
css03009
]
Cst_c19540 (rumA)
Enzymes [BR:
css01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.190 23S rRNA (uracil1939-C5)-methyltransferase
Cst_c19540 (rumA)
Ribosome biogenesis [BR:
css03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
Cst_c19540 (rumA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA_U5-meth_tr
Methyltransf_31
TRAM
TRM5-TYW2_MTfase
Methyltransf_25
Cons_hypoth95
Methyltransf_15
MTS
PrmA
Methyltransf_11
Methyltransf_4
N6_N4_Mtase
RrnaAD
TPMT
Glycos_transf_2
PCMT
Peptidase_Mx1
Motif
Other DBs
NCBI-ProteinID:
AGC68931
UniProt:
L7VR98
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All DBs
Position
complement(2132203..2133567)
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AA seq
454 aa
AA seq
DB search
MKKNDIYEIEITGMTHDGMGVGRVDGMAVFVQRAIEGEKVVAKIIKVTKNYAVARIEEWI
TTSPERTEPFCPVYKRCGGCSLQHMSYNMQLKFKHRVVTDNLERIGGFWGIQVSPVIGMD
NPMNYRNKAQYPVGMGDNGPVAGFYARRSHIIIDSERCGIQHPASEKVKNTVLEAVKELK
IPVYNEITGEGILRHIVTRVSYSTGDVMVILVVTDEKVPGLKKIIQKITREIPEVISIVL
NINKRRDNVILGDKVRTVYGSDTLVDRLGHLKFHISPLSFYQVNPVQTVKLYNKAVEFAG
LTGNETVFDLYCGIGTISLFLAEKAKEVIGVEVVPEAVEAATKNAVLNNISNARFYCGEA
EKVVPELYNEGIRADVVVVDPPRKGCDEALLQTVVKMQPERIVYVSCNPSTLARDLKYLA
ANGYNLDKVHPVDLFPWTEHVETVVLMSKVKNQV
NT seq
1365 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaagaacgatatatacgagattgaaataacaggcatgactcatgacggcatgggc
gtcggcagggttgacggcatggctgtttttgtgcaaagagcgatagaaggtgaaaaggtt
gtagcgaagataataaaggtgacaaaaaattatgccgtcgcaaggattgaagaatggatt
acaacaagccccgagcgcaccgagccgttttgcccggtatacaaaaggtgcggcggatgc
agccttcagcatatgtcttataatatgcagctcaaattcaaacaccgtgttgtaaccgat
aaccttgaaaggataggcggtttttgggggatacaggtcagtccggtgattggaatggac
aacccgatgaattacagaaacaaggcccagtatcctgtgggaatgggcgacaatgggcct
gtggcaggcttttacgcaaggcgaagccatataattatcgattccgaaaggtgcggaatt
cagcacccggccagtgaaaaagttaaaaacacggtgctggaggccgtaaaggaactgaaa
atacctgtatacaatgaaattacgggcgaagggattttgcgccatatagtgacgagggtg
tcctattcaacaggggacgttatggttatactggttgttaccgatgaaaaggtgcccgga
ctgaaaaaaataattcagaaaattacgcgtgaaattcccgaggtgataagcatagtttta
aatataaacaaacgaagggacaatgtaatactgggcgataaagtcagaaccgtgtacggc
agtgacacgctggtcgacaggcttggccatttgaaatttcacatttcgccgctgtctttc
tatcaggtaaatcctgtacagactgtgaagttatataacaaggctgttgaatttgcaggc
ctgacaggtaacgagacagtattcgacctgtattgcggcattggaacaatttcgctgttc
cttgcagaaaaggcgaaggaagtaatcggtgttgaggttgtgcccgaggcggtggaagcc
gccacgaagaacgcggtgcttaataatatttccaatgcgagattttactgcggtgaggca
gaaaaagtggtacctgaactgtataatgaaggaatcagagccgacgttgtggttgtggat
ccgccaaggaaaggctgtgatgaagcgcttttgcagacagtggtgaaaatgcagcctgaa
aggattgtatatgtatcatgcaacccgtcaacgctggcgagggatttaaaatatctggcg
gcaaacgggtataatttggacaaagtccatccggtggatctgtttccgtggaccgagcat
gttgagacggtagtattgatgtcaaaggtgaaaaatcaagtgtaa
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