Thermoclostridium stercorarium subsp. stercorarium DSM 8532: Cst_c24110
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Entry
Cst_c24110 CDS
T02440
Symbol
rpoD3
Name
(GenBank) RNA polymerase factor sigma-70 RpoD
KO
K03090
RNA polymerase sigma-B factor
Organism
css
Thermoclostridium stercorarium subsp. stercorarium DSM 8532
Brite
KEGG Orthology (KO) [BR:
css00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
css03021
]
Cst_c24110 (rpoD3)
Transcription machinery [BR:
css03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
Cst_c24110 (rpoD3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r4
Sigma70_r2
Sigma70_r3
Sigma70_r4_2
HTH_3
HTH_11
Sigma70_ECF
HTH_28
MarR
RPC3_helical
HTH_17
HTH_Mga
GLTSCR1
HTH_37
HTH_AsnC-type
Motif
Other DBs
NCBI-ProteinID:
AGC69371
UniProt:
L7VSM2
LinkDB
All DBs
Position
complement(2608660..2609412)
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AA seq
250 aa
AA seq
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MDKNKENRHEVSDKELFEQYRKTKDVNIRNEIVSRYLYLAEILAKKFINRGVEYDDLYQV
ACMALINAVERFDVNANVKFVSFATPTIIGEIKRYFRDKASVIRVPRRIYEIYQKVNQTR
ELLMQKNGRAPRVDEIAEYLNLSEETILEIIESWNVYKIQSFDQTIYDDDDVELHEAIGE
DDETFEKINNRDFLEKSLKHFNETEKKFIRLRYFENKTQKEIAENFNVSQMYISRLERKT
LEKFRRILKK
NT seq
753 nt
NT seq
+upstream
nt +downstream
nt
atggataaaaataaggaaaaccggcacgaagtttcggataaggagttgtttgagcagtat
agaaaaaccaaggacgtaaacatacgtaatgagattgtttcccggtatctgtatcttgct
gaaattcttgcgaaaaaatttatcaaccggggtgtggaatacgatgatttgtatcaggtt
gcctgcatggcgcttattaatgccgttgaacgttttgacgtgaatgccaatgttaagttc
gtaagctttgcaacgcctacaattataggcgaaattaagcgttatttccgtgacaaggct
tcggtaataagggtaccgagaagaatatatgagatataccagaaagttaaccagaccagg
gaactgcttatgcagaaaaacggaagggcgccgagggtggacgagattgcggaatatctg
aacctcagcgaagagacaattctggaaataattgaatcatggaatgtatataaaattcag
tcctttgatcagacgatttatgatgatgacgatgtggagcttcatgaggccataggcgag
gatgacgagacatttgaaaaaattaacaacagggatttccttgaaaaatcgctgaaacat
ttcaatgagaccgaaaagaaatttatcaggctaagatactttgaaaacaagacccaaaag
gaaattgccgaaaattttaacgtatctcagatgtatatttcaaggctggaacgaaaaact
ttggagaaattcagaagaattctgaaaaaataa
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