Thermoclostridium stercorarium subsp. stercorarium DSM 8532: Cst_c26150
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Entry
Cst_c26150 CDS
T02440
Symbol
rpoA
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
css
Thermoclostridium stercorarium subsp. stercorarium DSM 8532
Pathway
css03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
css00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
Cst_c26150 (rpoA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
css03021
]
Cst_c26150 (rpoA)
03400 DNA repair and recombination proteins [BR:
css03400
]
Cst_c26150 (rpoA)
Enzymes [BR:
css01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
Cst_c26150 (rpoA)
Transcription machinery [BR:
css03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
Cst_c26150 (rpoA)
DNA repair and recombination proteins [BR:
css03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
Cst_c26150 (rpoA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_L
RNA_pol_A_CTD
HHH_5
RAD51D_N
INTS7_HB
Motif
Other DBs
NCBI-ProteinID:
AGC69565
UniProt:
L7VMW6
LinkDB
All DBs
Position
complement(2807538..2808488)
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AA seq
316 aa
AA seq
DB search
MIEIEKPKIECVEMAEDFTYGKFVVEPLERGYGITLGNSLRRVLLSSLPGAAVTSIKIDG
VLHEFSTIPGVVEDVTEIILNIKELSLRLHSDGPKVIYIDYEGDGEIKAGDIKTDADVEI
LNPDLHIATISGNHRLYMEMIVDRGRGYVPAEKNKKPNQPIGIIPVDSIYTPVKKVNYTV
EDTRVGQVTDYDKLTIEVWTNGSIHPDEAISLAAKILSEHLNLFINLTEHAKDAEIMVEK
EETKKEKVLEMTIEELDLSVRSYNCLKRAGINTVEELISKTPEEMMKVRNLGRKSLEEVI
QKLEALGLSLAPSEDS
NT seq
951 nt
NT seq
+upstream
nt +downstream
nt
atgatagaaattgaaaagccgaaaattgaatgtgtggaaatggccgaggacttcacctac
gggaagtttgtagttgagccgctcgaaagaggatatgggattactttgggaaattctctg
aggcgtgtattgctttcttcacttccgggggctgcggtgacttcaataaagatagacggc
gtgctgcatgaattttcaaccattccgggcgttgtggaagatgtaaccgaaatcatactg
aacattaaggaactttcgctgagacttcattcagacggtccaaaggtaatttatattgat
tatgaaggcgacggtgaaataaaagcaggcgatattaagacagacgcggacgtggagatt
ctgaatcccgatctgcatatagcaactatcagcggaaatcatcggctgtatatggaaatg
atagtggacaggggccgcggatatgtacctgctgagaaaaacaaaaagcctaaccagcct
attggtataattcccgtcgattcaatttatacaccggttaaaaaagtaaactacacagtg
gaagatacccgtgtaggtcaggtaaccgattatgacaagcttacgatagaagtctggacg
aacggcagcatccatcccgacgaggcgataagtcttgctgcaaaaatactgagtgagcac
ctgaacctgttcataaatctgaccgagcacgcaaaagatgcggaaatcatggtggaaaag
gaagagacgaagaaggaaaaggtgctcgaaatgacgattgaggaactggatctttcggta
cgttcctacaattgtctgaaacgagccggcataaacaccgttgaggagcttatcagcaag
acgcctgaagagatgatgaaagtgaggaacctggggcgtaagtctcttgaagaagtaata
cagaaactggaggccctggggttgtctttggccccgtctgaagacagctga
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