Acetoanaerobium sticklandii: CLOST_1316
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Entry
CLOST_1316 CDS
T01334
Symbol
ruvB
Name
(GenBank) ATP-dependent DNA helicase, component of RuvABC resolvasome
KO
K03551
holliday junction DNA helicase RuvB [EC:
5.6.2.4
]
Organism
cst
Acetoanaerobium sticklandii
Pathway
cst03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
cst00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
CLOST_1316 (ruvB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cst03400
]
CLOST_1316 (ruvB)
Enzymes [BR:
cst01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
CLOST_1316 (ruvB)
DNA repair and recombination proteins [BR:
cst03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
CLOST_1316 (ruvB)
RecFOR pathway proteins
CLOST_1316 (ruvB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RuvB_N
AAA_lid_4
RuvB_C
AAA
AAA_5
TIP49
DUF815
Mg_chelatase
AAA_16
RNA_helicase
nSTAND3
TsaE
AAA_14
Sigma54_activ_2
AAA_18
AAA_3
MCM
Bac_DnaA
AAA_2
NTPase_1
AAA_22
NB-ARC
AAA_17
AAA_24
Rad17
NPHP3_N
AAA_28
AAA_33
IstB_IS21
Motif
Other DBs
NCBI-ProteinID:
CBH21436
UniProt:
E3PRD2
LinkDB
All DBs
Position
complement(1478248..1479249)
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AA seq
333 aa
AA seq
DB search
MFDINQDRLIDSSLKIEDESEVSLRPRNISEYIGQTNAVNQLNIFIEAAKKRNETLDHVL
LYGPPGLGKTTLSHIIASEMGVDIKVTSGPAIERAGDLAAILTNLKDKDILFIDEIHRIN
RNVEEVLYPAMEDYCLDIIIGKGPSARSIRLDIPKFTLIGATTRTGMLTSPLRDRFGVIL
NLDLYSVEQLLEIVTRSAKILDVPINNDAAIEIARRSRGTPRIANRLLKRVRDYAQVMGD
GKITLKIAKESLLVFEVDEEGLDKVDQRLLQSIIKNFAGGPVGLDTLAASIGEDKETIEE
VCEPFLIQKGFLNRTPRGRVATDFAYKHFNCKR
NT seq
1002 nt
NT seq
+upstream
nt +downstream
nt
atgtttgatataaatcaagatagattaatcgattcatcattaaaaatagaagatgaatca
gaggtatcattaagaccacggaatataagtgaatatattggtcagacaaatgctgttaac
caattaaatatttttattgaggctgctaaaaagagaaatgaaactctagatcatgttctt
ttatatggaccaccaggactaggaaaaactactttgtctcatataattgcttcagaaatg
ggagttgatattaaagttacgtcaggaccagctatagaaagagctggagatttagctgca
atattaactaatctcaaggataaagatatacttttcatagatgaaattcataggataaac
agaaatgtagaagaagtactttatcctgctatggaagattattgcttagatataataatt
ggaaaaggtccttctgctaggtctattagattggacattcctaaattcacccttattgga
gctacaactaggactggtatgcttacttctccacttagagatagatttggggttatctta
aatttggatttatattctgtagagcagctacttgaaattgttactaggtccgctaaaata
ttagatgttcctattaataatgatgcagctatagaaattgctaggagatctagaggaacc
cctagaattgctaatagacttttaaaaagagtgagagattatgcccaagtaatgggtgat
gggaaaataaccctaaaaattgctaaagaatctttgctagtatttgaagttgacgaagaa
ggacttgataaagttgaccagagactacttcagtcaataattaaaaattttgcaggggga
ccagtaggtctagatactttagcagcatcgataggagaagataaagaaactattgaagag
gtttgcgaaccttttctcattcaaaaggggtttctaaatagaactccaagaggaagagta
gctacggattttgcttacaagcattttaattgtaagagatag
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