Acetoanaerobium sticklandii: CLOST_1649
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Entry
CLOST_1649 CDS
T01334
Symbol
dnaE
Name
(GenBank) DNA polymerase III DnaE
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
cst
Acetoanaerobium sticklandii
Pathway
cst03030
DNA replication
cst03430
Mismatch repair
cst03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
cst00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
CLOST_1649 (dnaE)
03430 Mismatch repair
CLOST_1649 (dnaE)
03440 Homologous recombination
CLOST_1649 (dnaE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
cst03032
]
CLOST_1649 (dnaE)
03400 DNA repair and recombination proteins [BR:
cst03400
]
CLOST_1649 (dnaE)
Enzymes [BR:
cst01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
CLOST_1649 (dnaE)
DNA replication proteins [BR:
cst03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
CLOST_1649 (dnaE)
DNA repair and recombination proteins [BR:
cst03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
CLOST_1649 (dnaE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
PHP
DNA_pol3_finger
HHH_6
tRNA_anti-codon
tRNA_anti_2
Motif
Other DBs
NCBI-ProteinID:
CBH21769
UniProt:
E3PSB5
LinkDB
All DBs
Position
complement(1782069..1785521)
Genome browser
AA seq
1150 aa
AA seq
DB search
MDKKFVHLHLHTQYSLLDGFAKIDKLIQRAKDYSMDAVAITDHGVMFGVIDFYKKAKANG
IKPIIGCEVYTASRTYKDKEGIDKKSGHLILLAENEKGYRNLVKLVSMGFVEGFYYKPRI
DYKILKEHSEGLIGLSACLAGEIQQKLMNGQYKEAKEIALMLRDIFGENNFFLELQDHGI
REQKKVNIFLRKLSQDTGIPLVATNDVHYVDKDDAKTHDILLCIQTGKTLADEHKMEFET
DEFYFKSQSEMYELFPDDAQALRNTWEIANRCNVDFDFNTIHLPEYSVPENKAPSEYLRQ
LCQDGLVDRYKTIDSKLQERLDFELNVIENMGYVEYFLIVWDFIDFSKRSNIMVGPGRGS
AAGSIVAYTLGITDIDPIKYGLLFERFLNPERVSMPDIDIDFCYEKREKVIDYVREKYGS
DHVSQIITFGTLGARSSIRDVGRVMGISYSDVDKVAKEIPFALNMTIEKALDLNPNLRKI
YNEDEKARELIDVAKNVEGLPRHASTHAAGVVISKEPVDHYVPLYTQDNAVTTQFPMTTL
EELGLLKMDFLGLRTLTVIQKAIDIILRTRNITIDFSNSDYDDKAVYELLSSGDTLGVFQ
LESSGMRQFMKELKPETFEDIVAGISLYRPGPMDSIPLYIKNKNNPDSVVYDHESIRPIL
EVTRGILVYQEQVMQVVRDLAGYSYGRSDLVRRAMSKKKMDVMEEERRNFVYGKEDENGN
IEINGCVRNGIPEKIANKIFDDMIDFANYAFNKSHAAAYAVLAYETAYLKAYYPVEFMAA
IMTSVMGNTDKVVEYIRECERLKIEVLKPDVNKSFTEFAVENNHIRYSLCAVKNVGVHFV
ENLVAEREEKGIYIDFDDFAKRLDKKDINKRTIESLIKCGAFDELIPNRASIMAGYEKIL
SSISNSRKNNIEGQVSLFDTQLQNEVKAKIIELSEFNDKEKLQMEKEVLGLYLSGHPLNE
YKDMLSRITTTTTLTLREMKDNYIENQFKDNMSVKIGGVINKKSIKSTKNKDMMAFLTLE
DIYGTVEIIVFPKIFLKESSLLQEDVAILVHGRLSLKEDEEPKIIAEKIESLSNQMDNSL
YLRVNNIEDKDLLKEIKKVINQYPGNTYIYYFDSKSKKVFAPQKIEAVELCEELLEELAD
IIGEDNIKIK
NT seq
3453 nt
NT seq
+upstream
nt +downstream
nt
atggataagaaatttgtgcatcttcatcttcatactcagtatagtttgctggatggattt
gccaaaattgataaactaatacaacgcgccaaggattactcaatggatgctgtagcaata
acagaccatggagttatgtttggcgttattgatttttataaaaaagcaaaggcaaatgga
attaagcctataataggctgtgaggtatatacagcctcaagaacatataaggacaaagaa
ggaatagataaaaaatcagggcatctaatacttcttgcagaaaatgaaaagggttataga
aatctagtaaagctagtatctatgggttttgttgagggcttttattataagcctagaata
gactacaaaatactaaaggagcattcagagggattaattggactatcggcctgtctagca
ggagaaatccagcaaaagcttatgaatggtcaatataaagaagcgaaagaaattgcactg
atgctcagagatatatttggtgaaaacaatttttttctagagcttcaagatcatggaata
agagagcagaaaaaggtaaatatatttcttagaaagctttctcaggacacgggaatacct
ctagtagcaaccaatgatgttcattatgtggataaagacgatgctaaaacccatgatatt
ctcttatgtatccaaactggaaaaaccttagcagatgagcataaaatggaatttgaaaca
gatgaattctattttaagtcgcaatcagaaatgtatgaactgtttccggatgatgcgcag
gcacttagaaatacttgggaaattgccaatagatgcaatgtggattttgattttaatact
attcatttgcctgaatacagcgtaccggaaaacaaagctcctagcgagtatcttagacag
ctgtgccaagatggcctcgtagatagatataaaaccatagattctaagcttcaagaaaga
ctggattttgaacttaatgtaatagaaaatatgggttatgttgaatacttccttatagtt
tgggattttatagatttttcgaaaagaagcaatataatggtaggcccaggtaggggctct
gcggctggttcaattgtagcctatactctaggtattactgatatagacccaataaaatat
ggcttgctatttgaacgctttttaaaccctgagagggtttcgatgccagatatagatata
gatttttgctatgaaaaaagagaaaaagtaattgattatgtaagagaaaaatatggaagc
gaccatgtatcacaaatcataacctttggaacccttggagctcgttcatctatacgagat
gtaggaagagttatgggaataagctacagtgatgtggataaagtagcaaaggaaatacct
tttgccctaaacatgacaattgaaaaggcgcttgatttaaatcctaatctaagaaaaata
tacaacgaagatgaaaaagcaagagagcttatagatgtagctaaaaacgtagagggtttg
ccaagacatgcttctacccacgcagcaggagttgttatatcaaaggaacccgtagatcat
tatgtgcctttatatactcaagataacgctgtgactacgcagtttcctatgaccactcta
gaagagctagggctgcttaaaatggatttcttagggcttcgtactcttacagttatccaa
aaggcaatagatataatattaagaacaagaaatataaccatagatttttcaaatagcgat
tacgatgataaggcagtatatgagcttctttcgtctggagatactctaggcgtatttcag
cttgaaagcagtggcatgagacagtttatgaaagagcttaagccagagaccttcgaagat
atagtagctgggatttcgctttacagaccaggaccaatggattctattcctttatatata
aagaataaaaacaatcctgattctgtagtttacgaccatgaatcaatacgcccgatatta
gaagtaactagaggaatattagtatatcaagagcaggttatgcaagtggttagagattta
gctggatattcctatggcaggtcagacctagttagaagagctatgagtaagaaaaaaatg
gatgtcatggaagaagaaagacgtaattttgtatatggaaaagaagacgaaaatggaaat
atagaaattaatggatgtgtaagaaatggaattccagaaaaaatagccaacaaaatattt
gatgatatgatagattttgcaaattatgcttttaataaatctcatgcagcggcttacgct
gtgcttgcttatgaaacagcatatttaaaggcgtactatcctgttgaatttatggcagct
ataatgacgagcgtcatgggaaatacagataaagttgtagaatatatcagagaatgcgaa
aggctaaaaatagaagtcctaaagccagatgtcaacaaaagcttcacagagtttgcagtt
gaaaataaccacataagatatagcctatgtgcagtaaaaaatgtaggggtacattttgtg
gaaaatctggtagctgaaagagaagaaaagggcatatatattgattttgatgactttgca
aaaagactagataaaaaggatataaacaaaagaaccattgagagccttataaaatgtgga
gcctttgatgagctgataccaaatagagctagtatcatggctggatatgaaaaaatcctt
tctagtatttcaaattcaaggaaaaataatatagaaggacaggtttctcttttcgatact
cagcttcaaaatgaagtaaaagctaaaatcatagagctttcggagtttaatgataaagaa
aagcttcagatggaaaaagaagtacttggactttacttaagtggccatccacttaatgaa
tataaggatatgctatctagaataacaactacaacaaccttaacgctaagagaaatgaaa
gataattacattgaaaaccaattcaaagataatatgagcgtaaaaattggtggagtaata
aataagaaaagcataaaatcgactaagaataaagacatgatggcttttttaaccctagag
gacatatatggaacagtggaaataatagtgtttcctaaaatttttcttaaagaatcttct
cttttgcaagaagatgtagcaatcctagttcatggaagattatccttaaaggaagatgaa
gaaccaaaaataattgcagaaaaaattgaatctctttcaaatcaaatggataattctcta
tatttaagggtaaataatattgaggacaaagacttgttaaaagaaattaaaaaagtaata
aatcaatatcctggaaatacctatatttattattttgatagcaaatcaaaaaaagtattt
gctcctcaaaaaatagaagctgtagaattgtgtgaggaattgctcgaagagttagcagat
ataataggtgaagataatattaagataaagtaa
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