Acetoanaerobium sticklandii: CLOST_2137
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Entry
CLOST_2137 CDS
T01334
Symbol
rho
Name
(GenBank) transcription termination factor
KO
K03628
transcription termination factor Rho
Organism
cst
Acetoanaerobium sticklandii
Pathway
cst03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
cst00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
CLOST_2137 (rho)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cst03021
]
CLOST_2137 (rho)
03019 Messenger RNA biogenesis [BR:
cst03019
]
CLOST_2137 (rho)
Transcription machinery [BR:
cst03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
Transcription termination factor
CLOST_2137 (rho)
Messenger RNA biogenesis [BR:
cst03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
CLOST_2137 (rho)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rho_RNA_bind
ATP-synt_ab
Rho_N
Spore_III_AA
HeH
ATPase_2
OB_RNB
NACHT
AAA_25
AAA_22
S1CSD-TOTE-2
AAA_24
AAA_19
AAA
Motif
Other DBs
NCBI-ProteinID:
CBH22257
UniProt:
E3PTQ3
LinkDB
All DBs
Position
complement(2265893..2267266)
Genome browser
AA seq
457 aa
AA seq
DB search
MVDLHSMKLIELKELAKEKNIKLPKAVKKNELIEILEKNNEQPNKDEFIKSVDTDNKKEL
ANKKDSQEQQLASLPDNLAEEIKDEQEVNFAEGVLEILPDGYGFLRGSNYLSTENDVYIS
PSQIRRFNMKTGDKILGITRPPKNGEKFRAILYVKSINGYKPDAATRRKSFDTLTPVYPD
ERFYLEKSKELSARLIDIISPVGKGQRGLIVAPPKAGKTTLLKTIANSIIHNNKEVELIV
LLVDERPEEVTDIRESVIGADVISSTFDELPTHHIKVAEMVLNRAKRLVEHGKDVVILLD
SITRLARAYNLTISPTGRTLSGGLDPGALYGPKKFFGAARNIRNGGSLTILATALVETGS
RMDDVIFEEFKGTGNMELHLDRKLAEKRIFPAIDIYKSGTRKEEMLLNEKELACAYNLRR
TLSNSTAFDIMEQIISMMKNTKDNDAFIDAITEAFKQ
NT seq
1374 nt
NT seq
+upstream
nt +downstream
nt
atggttgatttgcattcgatgaagctcattgagttaaaagaattggcaaaagaaaagaat
attaaattgccaaaagcagtaaagaaaaatgagttgattgagatattagaaaaaaataat
gaacaacctaataaagatgaatttattaaaagtgttgatacagacaataaaaaagagctt
gctaataaaaaggatagtcaagaacagcagctagcatctttgccagacaatttagcagaa
gaaatcaaagatgagcaagaagtgaattttgcagagggagtacttgaaatcctgccagat
ggctatggatttttaagaggctcgaattatctatctacagaaaatgacgtttatatatct
ccatcccaaattcgtagatttaatatgaaaacaggagataaaattctaggtataactagg
ccacctaaaaatggagaaaaatttcgagctattttatatgtaaagtctataaatggttat
aagccagatgcagctacaagaagaaaatcttttgacacgctcactcctgtttatccagat
gagagattttatttagaaaaatctaaagagctttctgcaagattaattgatataataagt
cctgttggaaaaggtcaaagaggattaatagtagctcccccaaaagctggtaaaacaact
ctacttaaaactatagcaaattctataattcataataataaagaggtcgaactaatagta
cttctagtggatgaacgtcctgaggaagtaacagatatcagagaatctgtaatcggagca
gatgtaatatcatctacatttgatgagcttcctactcaccacataaaagttgctgaaatg
gttctaaatagagcaaaaagacttgtagagcatggaaaagacgtagtgattcttcttgat
agtatcacaagacttgcaagagcttacaatcttacgatatctccaactggaagaactctt
tcaggaggacttgatcctggagctttatatggccctaagaagttttttggagcggctagg
aatattagaaacggtggctctcttactatattagcaactgctttagtagaaacgggttct
cgtatggacgatgtaatctttgaggagttcaaaggtacaggcaacatggagcttcatcta
gatagaaagctagcagaaaaacgaattttcccagcaatagacatatataaatctggaacg
agaaaagaagaaatgttactaaatgaaaaagagcttgcttgtgcatacaaccttagaaga
actcttagtaactcaacagcgtttgatattatggagcagattatttcgatgatgaaaaat
acaaaagataacgatgcatttatagatgctattacggaagcattcaaacaataa
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