Entry |
|
Symbol |
alkA
|
Name |
(GenBank) DNA-3-methyladenine glycosidase
|
KO |
|
Organism |
cst Acetoanaerobium sticklandii
|
Pathway |
|
Brite |
KEGG Orthology (KO) [BR:cst00001]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
CLOST_2502 (alkA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:cst03400]
CLOST_2502 (alkA)
Enzymes [BR:cst01000]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.21 DNA-3-methyladenine glycosylase II
CLOST_2502 (alkA)
DNA repair and recombination proteins [BR:cst03400]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
CLOST_2502 (alkA)
|
SSDB |
|
Motif |
|
Other DBs |
|
LinkDB |
|
Position |
complement(2634587..2635504)
|
AA seq |
305 aa
MNWKNHDSYIELYPPKEFDFKQCLDFLARNVQEMLHKIKDGYLIKLLKIDEEMILCKIEA
EHTVIKVEFLSGKPSYEGREAIAKYIWEWFDLDQNLEEFYNIASEDKLLSPLVKRYYGLR
IVGMPDLFESLVWAIIGQQINLNFAYTLKKRFVKAFGESIIFENETYWVFPSYDKIAQIE
VEELRNHQFTTRKAEYIIGIAKAMTTNEISKEALLNQHDFEKIKQSLMVLRGVGAWSADY
VLMKCFHDNSSYPVGDVGLQNAFKSNLGLDRKPTAEEMYEYAKAWKGWEAYATFYLWRSL
SDKTT |
NT seq |
918 nt +upstreamnt +downstreamnt
atgaactggaaaaatcacgattcttatatagaattatatccaccaaaggaatttgatttt
aagcagtgtctagattttttggctaggaatgttcaagaaatgttgcacaaaatcaaagat
ggatatttgattaaacttttaaaaatagatgaggaaatgattttatgtaagatagaggct
gagcatacggttataaaggttgaatttctatcagggaagccttcatatgaaggaagagaa
gcgattgcgaagtatatctgggaatggtttgatttagaccagaatttagaagagttttat
aatatagctagtgaggacaaactattaagcccactggttaaaagatattatgggcttcga
attgttggaatgcctgatttgtttgaatctctagtgtgggcaattataggccagcaaatt
aatctaaactttgcctatactcttaaaaagcgttttgtaaaggcttttggagaaagtata
atttttgaaaatgaaacttactgggttttcccatcatatgataaaatagctcaaattgaa
gtcgaggagttaagaaaccatcagtttacaactcgaaaagcagaatatattattggaata
gcaaaagctatgacaaccaatgaaatttcaaaagaagccttactcaatcagcatgacttt
gagaaaataaagcaatcactaatggtattgagaggggtaggcgcatggtcagcagattat
gtacttatgaaatgtttccatgacaattcttcatatcctgtaggagatgtaggtcttcaa
aatgcatttaaaagcaatttaggattagatagaaagcctacagctgaggaaatgtatgaa
tatgctaaagcttggaaagggtgggaggcttatgctaccttttatctatggaggtcgtta
agtgataaaaccacttaa |