Acetoanaerobium sticklandii: CLOST_2507
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Entry
CLOST_2507 CDS
T01334
Name
(GenBank) ATP-dependent DNA helicase
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
cst
Acetoanaerobium sticklandii
Pathway
cst03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
cst00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
CLOST_2507
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cst03019
]
CLOST_2507
03400 DNA repair and recombination proteins [BR:
cst03400
]
CLOST_2507
Enzymes [BR:
cst01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
CLOST_2507
Messenger RNA biogenesis [BR:
cst03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
CLOST_2507
DNA repair and recombination proteins [BR:
cst03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
CLOST_2507
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RQC
Helicase_C
DEAD
HRDC
RecQ_Zn_bind
ResIII
Helicase_Sgs1
Cas3-like_C_2
ISN1
Motif
Other DBs
NCBI-ProteinID:
CBH22622
UniProt:
E3PVR9
LinkDB
All DBs
Position
complement(2637846..2639648)
Genome browser
AA seq
600 aa
AA seq
DB search
MDLQNILKTYFGYDEFRNGQDKLIESIIEGRDALGIMPTGGGKSICYQLPAIALDGITIV
ISPLISLMKDQVDSLNELGINAAFINSTLDNGEFLQILEGIRANSYKIVYVAPERLNTDS
FINLVKDIRISLVAVDEAHCISQWGHDFRPSYLEIPRFINSLKQRPAVAAFTATATKEII
KEIKRLIGLRNPIEVTTGFDRPNLYYQVLKVSNKSKFLIEYLNENFKTESGIVYCATRKS
VESLVKILNDKGFSAVGYHGGMNSEERQNNQDEFILGNKRLIVATNAFGMGIDKPDVRFV
IHYNMPKNMEAYYQEAGRAGRDGEKSDCILLYSASDIVKQKLMIQNDDIDPKRQEMLYKN
LQYLVNYCNTNECLRNQILNYFDEDSANGKCKNCSNCIDSSEMIDITLEAQKILSCIYRV
NQRYGANMVIQVLRGSKNKKVLEARLDNVSTYGIMKEYSDSAISEIIMTLVSSGYIHMTH
DKYPVLKLTSKSADVLSGKTKLHHKKHLLQKKDEKEKASKSVKGGNIDFDIELFEKLKQY
RYKIAQEKGLPPYVIFHDIALKEMAAYLPVNKESFLEIKGVGEKKYENYGEGFIDIIKGY
NT seq
1803 nt
NT seq
+upstream
nt +downstream
nt
atggacttacaaaatattttaaaaacctattttggctatgacgagtttagaaatggtcaa
gacaaattgatagaaagtataatcgaaggaagagatgctctagggattatgcccactggt
ggaggaaaatctatctgctatcagcttcctgctatagcacttgatggaattactatagtt
atatctccgcttatatctcttatgaaggatcaagtggattcattaaatgaactagggata
aatgcggcatttataaatagcactcttgataacggcgagtttttgcagatattagaaggt
atacgagctaatagctacaagatagtttatgttgcgcctgaaagattaaatactgattct
tttataaatctagttaaagatataaggatatctcttgtggcagttgatgaggctcactgt
atcagtcagtgggggcatgattttaggccgagctatcttgaaattcctaggtttattaat
tctttaaagcaaagaccagcagtagcagcatttacggcgactgcaaccaaagaaatcatt
aaggaaattaagcgtcttatagggctgagaaatcctatagaggtcactactggttttgat
agaccaaatctctattatcaggtgctaaaagtcagcaataaatctaaatttttaattgag
tatctaaatgaaaattttaaaactgagtctgggatagtttactgcgccacgagaaagtca
gttgagtcactggttaagattttaaatgataaggggttttcggcagtggggtatcatgga
ggaatgaactcagaggaacgtcaaaataatcaagacgagtttatacttggaaataaaaga
cttatagttgcaaccaatgcttttggtatgggaatagataagccagatgttagatttgta
atccactacaacatgcctaaaaatatggaagcctattaccaagaggcaggaagagcagga
cgtgacggagaaaaaagcgattgtattttactgtattctgcttcagatatagtaaagcaa
aagctcatgattcaaaacgatgatatagaccctaaaaggcaagagatgctgtacaaaaat
ttgcagtacctagttaattactgcaatacaaatgaatgtcttagaaatcaaatactaaat
tattttgatgaggattctgcaaatggtaagtgcaaaaactgcagtaactgtatagatagc
tcggaaatgatagatattactctagaagctcagaaaatactttcttgcatatacagggtg
aaccaaagatatggagccaacatggtgatacaggtgcttagagggtcaaaaaataaaaag
gtattagaagctagactagataatgtatccacctatggaataatgaaagagtacagtgat
agtgctatcagtgagataatcatgacactggtatcaagtggatatattcatatgactcat
gataaatacccagtgttaaaattaaccagcaaatctgcagatgtactgagcggaaaaact
aagcttcatcataaaaaacatttattgcaaaagaaagatgaaaaagagaaagctagtaaa
tctgtaaaaggtggaaatatagattttgatatagagctatttgaaaagctaaagcaatat
agatataagatagcccaagaaaaagggctacctccatatgttatttttcacgatatagcg
ttaaaagaaatggcggcctatctgccagtgaataaagagtcctttttagaaataaagggc
gtaggtgagaagaagtatgaaaattatggtgaaggatttattgatataattaagggatat
taa
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