Corynebacterium stationis: CSTAT_05150
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Entry
CSTAT_05150 CDS
T04724
Name
(GenBank) 5-hydroxymethyluracil DNA glycosylase
KO
K10563
formamidopyrimidine-DNA glycosylase [EC:
3.2.2.23
4.2.99.18
]
Organism
csta
Corynebacterium stationis
Pathway
csta03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
csta00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
CSTAT_05150
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
csta03400
]
CSTAT_05150
Enzymes [BR:
csta01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.23 DNA-formamidopyrimidine glycosylase
CSTAT_05150
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
CSTAT_05150
DNA repair and recombination proteins [BR:
csta03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
CSTAT_05150
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Fapy_DNA_glyco
H2TH
zf-FPG_IleRS
NFACT_N
Motif
Other DBs
NCBI-ProteinID:
APT94745
LinkDB
All DBs
Position
1099604..1100416
Genome browser
AA seq
270 aa
AA seq
DB search
MPELPEVEVVRRGLEPHIVGHTFDSVEVLHPRANRGQEAPLDAILRNRLVSGIERRGKYL
WCQLDGNTDREDDVLFVHLGMSGQLRIGHTDSKHVRIRAHLSDGVDLSFIDQRTFGYWLV
APLAKIDHIGQDPLSPAFDIVAAARKLRTKRTHVKTALLDQTIASGIGNIYADEALWRAK
VSPLRKANKLLQREAIAIYEAAVEVMTEALAQGGTSFDALYVNVNGESGYFSRSLHAYGR
ADEPCDRCGTALNRVVLNARSSHFCPQCQC
NT seq
813 nt
NT seq
+upstream
nt +downstream
nt
atgcctgagttgcctgaagtagaagtcgttcgccggggtcttgaaccgcacatcgtgggg
cacacctttgattccgttgaggtgctgcacccgcgcgcgaataggggacaagaagcccct
ttagatgcgatactgcgcaaccgccttgtcagcggcattgaacgtcgtggcaagtatttg
tggtgtcaattagacggcaacaccgaccgtgaagatgatgtgctctttgtgcatctggga
atgtcgggtcagctccgcattgggcataccgattccaagcacgtgcgtattcgcgcgcat
ttaagcgatggcgttgatttaagcttcattgaccaacgcacctttggctactggttagta
gctcctttagccaaaattgaccacatcggccaggatccgctcagtccggcttttgacatc
gtggctgccgcgcgcaaacttcggactaagaggacacacgtaaaaaccgcgctgttggat
caaacaatagcttctggaattggcaatatttatgccgatgaagcgctctggcgcgcgaaa
gtatcgccactgcgcaaagccaataagctactgcaacgcgaagctatcgcgatttatgaa
gctgcagtggaagtgatgactgaagccctagcgcagggtggtaccagttttgatgcgctt
tatgtcaatgtcaacggtgaatctggctacttctcccgttctttacatgcctatgggcgt
gccgatgaaccctgcgaccggtgcggcacagcattgaatcgcgtggttcttaatgcgcgc
tcgtctcatttctgcccgcagtgccaatgctaa
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