Corynebacterium stationis: CSTAT_05530
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Entry
CSTAT_05530 CDS
T04724
Name
(GenBank) polynucleotide phosphorylase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
csta
Corynebacterium stationis
Pathway
csta03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
csta00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
CSTAT_05530
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
csta03019
]
CSTAT_05530
03016 Transfer RNA biogenesis [BR:
csta03016
]
CSTAT_05530
Enzymes [BR:
csta01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
CSTAT_05530
Messenger RNA biogenesis [BR:
csta03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
CSTAT_05530
Transfer RNA biogenesis [BR:
csta03016
]
Prokaryotic type
tRNA degradation factors
CSTAT_05530
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
PNPase
S1
KH_1
KH-I_KHDC4-BBP
RNase_PH_C
KH_2
Motif
Other DBs
NCBI-ProteinID:
APT94819
LinkDB
All DBs
Position
1180677..1182953
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AA seq
758 aa
AA seq
DB search
MSPRNSGKAQTPNNQVSFAKDEDFDILEATAVLDNGDFGTRTITFETGQLARQADGSVTT
YFDDDTMLLTTVTASNQPREGFDFFPLTVDVEERMYAAGKIPGSFFRREARPSTEAILAC
RLIDRPLRPTFVKGLRNEVQVINTVLSLDPAEYYDVIAINGSSAATQLSGLPVSGPVGGV
RMALLADDKHPKGQWVAFPNAEQHERALFEMVVAGRIVNRKQKGKNVDDVAIMMVEAGAG
VHVHERIAEGAPAPQESTVAEGLEAAKPFIKTLCEAQAGLAERVGKKTKEFPLFPAYADE
IYDAVARKAEKRLGKLLTIAAKQERDDATNAHMEEVEAQLLEVFTEADASKQIRAAYNQL
MKEIVREKILTEGFRIDGRAAEDIRDLGVEIGLIPRVHGSALFERGETQILGVTTLDMLK
MEQTIDSLTPVESKRYIHHYNFPPYSTGETGRVGSPKRREIGHGALAERALLPVIPSRED
FPYTIRQVSEALGSNGSTSMGSVCASTMSLYNAGVPLKAPVAGIAMGLVSGEVEGTERFV
ALTDILGAEDAFGDMDFKVAGTSDYITALQLDTKLDGIPSEVLASALSQARNAREEILDI
MAEGIDGPDEMSSQAPKITSIKIPVSKIGELIGPKGKTINTITEETGADVSIEDDGTVYV
SATSGEAADAAIEKVNAIANPQLPKVGERFLGTVVKTVAFGAFVSITPGRDGLIHISNLG
GDERIEKVEDVVKVGDKIQIEIADIDNRGKISLVPVEA
NT seq
2277 nt
NT seq
+upstream
nt +downstream
nt
atgagtccacgcaatagcgggaaagcacaaaccccaaataaccaggtcagcttcgcaaaa
gatgaagactttgacatcctcgaggcaaccgccgttttggataatggtgactttggcacc
cgcaccatcacttttgaaactggccaactagcccgtcaagctgatggatctgtcaccact
tacttcgatgatgacaccatgttgttgaccaccgtgactgcatcgaaccagccacgcgaa
ggctttgacttcttcccactgaccgtggatgtggaagagcgcatgtacgcagcaggtaag
attcctggctctttcttccgccgtgaagcacgtccttcaaccgaagcaattttggcttgt
cgcttgattgaccgtccgctgcgcccaacctttgttaagggcctgcgcaacgaagttcag
gtcatcaacaccgtgttgagcctggatccggcagaatactacgacgtcattgctatcaat
ggctcgtccgcagcaacccagctatccggtttgccagtttctggcccagtcggtggcgta
cgcatggcgctgctggctgatgataagcacccaaagggacagtgggtagcgttcccgaat
gctgaacagcatgagcgcgcactgtttgaaatggtcgttgctggccgaattgttaaccgc
aagcaaaagggcaagaacgtcgatgacgttgccatcatgatggttgaagcaggcgctggc
gtgcacgtgcacgaacgcattgcggaaggggcacctgcaccacaggaatccaccgtggca
gaaggcctggaagctgcaaagccattcatcaaaaccctgtgtgaagcacaggcaggtctt
gctgagcgtgttggtaagaaaaccaaggaattcccgctcttcccggcctatgcagatgaa
atctatgatgcggtggcacgtaaggccgaaaagaggcttggcaagctgctcaccatcgcc
gcaaagcaggagcgcgacgacgcaaccaatgcacacatggaagaagtagaagcgcagctt
ctggaagtatttactgaagcagacgcttccaagcagatccgcgcagcttataaccagctg
atgaaggaaattgtgcgtgagaagattctcaccgaaggtttccgcatcgacggtcgtgca
gcagaagacattcgcgacctcggcgtagaaatcggtctgatcccgcgcgtccacggttcc
gcactctttgagcgtggagagacccagattctgggcgtaaccaccttggatatgctcaag
atggaacagacgattgattctttgactccagtggagtccaagcgctacatccaccactac
aacttcccgccatactccaccggtgagaccggacgcgttggctctccaaagcgtcgcgaa
attggtcacggtgcattggctgagcgtgcactgttgccagttatcccttcccgcgaagac
ttcccgtacaccattcgccaggtctctgaggcactgggctccaacggttcgacttcgatg
ggttccgtttgtgcttcgacgatgtcgctgtacaacgcaggtgttccattgaaggcacct
gtggctggtatcgccatgggtctggtttctggtgaggttgaaggcacggagcgcttcgta
gccttgactgacatcttgggcgcagaagatgcattcggcgacatggacttcaaggtcgca
gggaccagtgactacatcaccgcactgcagctcgataccaagcttgacggtatcccttct
gaggtcctggctagcgctttgtcgcaggcacgcaatgcccgtgaagagatcctcgacatc
atggctgaaggcatcgacggcccagatgagatgtcctcgcaggcaccaaagattacttcg
attaagattccagtatcgaagatcggtgagttgattggccctaagggcaagacgatcaac
accatcacggaagaaacgggcgctgatgtctctatcgaagatgacggtacagtttacgtt
tccgcgacttccggtgaagcagcggatgcagcaattgaaaaggtcaatgccattgctaat
ccgcagctacctaaggtgggcgagcgcttcttgggcacggtagtcaagactgtagccttt
ggtgccttcgtttccatcaccccgggtcgcgacggcctgattcacatctctaacctcggt
ggcgacgagcgaatcgaaaaggttgaggatgtagtcaaagttggcgataagatacagatc
gaaattgctgatattgataaccgcggcaaaatctccctggttccagttgaggcttaa
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