Corynebacterium stationis: CSTAT_07960
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Entry
CSTAT_07960 CDS
T04724
Name
(GenBank) transcription termination factor Rho
KO
K03628
transcription termination factor Rho
Organism
csta
Corynebacterium stationis
Pathway
csta03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
csta00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
CSTAT_07960
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
csta03021
]
CSTAT_07960
03019 Messenger RNA biogenesis [BR:
csta03019
]
CSTAT_07960
Transcription machinery [BR:
csta03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
Transcription termination factor
CSTAT_07960
Messenger RNA biogenesis [BR:
csta03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
CSTAT_07960
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ATP-synt_ab
Rho_RNA_bind
Rho_N
AAA_25
Spore_III_AA
NACHT
CDC27
S1CSD-TOTE-2
Motif
Other DBs
NCBI-ProteinID:
APT95258
LinkDB
All DBs
Position
complement(1694837..1696990)
Genome browser
AA seq
717 aa
AA seq
DB search
MSDTDINSAQDLASLKLTELRTIAAQKGLRGVSGLRKGDLITAIVSGQVPGKAEPAAKKA
SAKAAPQADAPAAKNEDNAAEKTQSAPSGAAEEDKPKSGARRARRVVRSTSSARAEDGAQ
DSAQAEKAAASASSASEDAGKADTSVSNEGEGSEEHRYESRSQARRARRHRARRNDQSGS
DESQASTSASASDDQPDSDSERNDNRRNARDNNEESDSSKDNRGDNSNNHQRGGRNNNRR
NDRNDNRGGDNRGSDNRNGNGDHDGDNRNGDSRGNDNRDNNRGGRNSNQDDDNGRRGRRG
RRNRRNRGGNDSHGGQNSNDMQVRDGDELQAVGGILEVVDHNVAFLRTTGYRAMSSDVFV
NSNLVRRLGLRSGDAVTGQVKVGGATHSHGNGRNRRKYNQLVRVDTVNGLEPEQAKSRPQ
FSKLTPLYPNQRLRLETTPNVLTTRVIDLIMPIGKGQRALIVSPPKAGKTTILQNIANAI
ATNNPECYLMVVLVDERPEEVTDMQRSVKGEVIASTFDRPPSEHTAVAELAIERAKRLVE
QGKDVVVLLDSITRLGRAYNNSSPASGRILSGGVDSNALYPPKRFLGAARNIEDGGSLTI
IATAMVETGSTGDNVIFEEFKGTGNAELKLDRSISERRVFPAVDVNPSGTRKDELLLVPD
ELRIMTKLRRILSGMDSHQAIDLLIKQLKKTKSNAEFLMGIATSAPMTASLEEEDYS
NT seq
2154 nt
NT seq
+upstream
nt +downstream
nt
gtgagcgatacggacatcaactccgcacaggatttggcctccctaaagctaactgagctg
cgcacaattgctgctcagaagggtttgcgtggagtttcaggtttgcgtaaaggtgacttg
attaccgcaattgtttccggccaagtgccgggcaaggcagagcctgctgccaagaaggca
tcggctaaggctgcacctcaagctgatgcaccagctgcaaagaacgaggacaacgctgcg
gaaaagacgcagtctgcccctagcggtgctgctgaggaagacaagccaaagtctggcgcc
cgtcgtgcacgtcgcgtcgtgcgttcgactagttcagcacgtgctgaagatggtgcacag
gattctgcacaggctgagaaggctgcggcttctgcatcaagcgctagcgaagatgccggc
aaggccgacacttctgtttctaatgagggggaaggcagcgaagaacaccgctatgaatcc
cgctcccaggctcgtcgagcacgtcgtcaccgcgcacgtcgcaatgatcaatccggttca
gatgagagccaggcatcgacaagcgctagcgcatctgatgaccagccagattctgactcc
gagcgcaacgacaaccgccgtaatgcacgcgataacaacgaagagagcgactcttcgaaa
gataaccgtggcgataattccaataaccaccagcgcgggggccgcaacaacaaccgccgc
aatgaccgcaacgacaaccgcggtggcgataaccgtggtagcgataaccgcaacggcaat
ggcgaccatgatggcgacaaccgcaatggtgatagccgtggcaacgacaaccgcgataac
aatcgtggtggtcgcaatagcaaccaggatgatgacaacggacgtcgtggacgtcgcggt
cgtcgcaaccgtcgcaaccgcgggggcaatgacagccacggtggtcaaaacagcaatgac
atgcaggttcgcgatggtgacgagctgcaggctgttggcggcatcctagaggttgtcgac
cacaacgttgccttccttcgtaccaccggttaccgcgcgatgagcagcgacgtctttgtt
aacagcaacctggtgcgccgtttgggtctgcgctccggtgatgctgtgactggccaggtc
aaggttggcggtgcaacccactcgcacggcaacggccgcaaccgccgcaagtacaaccag
ttggttcgcgtcgacacggtcaatggtctagaaccagagcaggctaagagccgcccgcag
ttttctaagctcactccgctgtacccgaaccagcgtttgcgcttggaaaccacaccaaat
gtgctgaccactcgtgttatagacttgatcatgcctattggtaagggtcagcgtgcgctg
attgtttcgcctcctaaggctggtaagaccaccattttgcaaaatattgcaaatgctatc
gctaccaacaacccagagtgctacttgatggttgtgttggttgatgagcgccctgaggaa
gttaccgatatgcagcgttcggtcaagggggaagttattgcttcgaccttcgaccgccca
ccatcagagcacaccgctgtggcggagctggcgattgagcgtgcaaagcgcctggtagag
cagggcaaggacgttgtggttctgctggactcgattactcgtttgggtcgtgcctacaac
aactcttcaccagcatctggacgtattttgtccggtggtgtggactcgaatgcgctttac
ccaccaaagcgtttcttgggtgcagcacgcaacatcgaagatggcggttctttgactatt
attgctaccgcgatggtggaaaccggttctaccggtgacaatgtcatcttcgaggaattc
aagggcaccggtaacgcggagctgaagctggatcgctctatttctgagcgtcgcgtcttc
ccagcggttgacgtcaacccatcgggtacccgtaaagacgagcttctgctggttccagat
gaactgcgtatcatgactaagctgcgtcgcatcctgtctggtatggattcccaccaggct
attgacctgctgattaagcagctcaagaagaccaagtccaacgctgagttcctcatgggt
attgcaacttctgctcctatgacggcaagccttgaagaggaggactactcctaa
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