Corynebacterium stationis: CSTAT_08190
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Entry
CSTAT_08190 CDS
T04724
Name
(GenBank) DEAD/DEAH box helicase
KO
K05592
ATP-dependent RNA helicase DeaD [EC:
5.6.2.7
]
Organism
csta
Corynebacterium stationis
Pathway
csta03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
csta00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
CSTAT_08190
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
csta03019
]
CSTAT_08190
03009 Ribosome biogenesis [BR:
csta03009
]
CSTAT_08190
Enzymes [BR:
csta01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
CSTAT_08190
Messenger RNA biogenesis [BR:
csta03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
CSTAT_08190
Ribosome biogenesis [BR:
csta03009
]
Prokaryotic type
rRNA helicases
CSTAT_08190
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
DbpA
ResIII
CMS1
Cas3-like_C_2
UvrA_inter
adh_short
PIN_9
AAA_22
Motif
Other DBs
NCBI-ProteinID:
APT95300
LinkDB
All DBs
Position
complement(1752863..1754863)
Genome browser
AA seq
666 aa
AA seq
DB search
MSITDNATGGEMEPEDNFNQSESQDKTQGDAVDTAQVTGAADTSEDTGAEDKNSANDNPQ
GFANLGLPDNVQDAVAKVGYTTPSPIQAETIPILMEGRDVVGLAQTGTGKTAAFALPVLS
QIDTNARHPQALVLAPTRELALQVADSFQSFASHLGRIDVLPIYGGQAYGIQLSGLRRGA
QVIVGTPGRVIDHLEKGSLDISQLRFLVLDEADEMLNMGFQEDVERILADTPEEKQVALF
SATMPNSIRRLSKKYLNNPAEVTVKTERRTNDNIKQRFLLTPHRAKLDAFTRILEVTDYD
AMIVFCRTKHETEEVAEKLRDAGYNAAAINGDIAQNQRERTVDQLKDGRLDILVATDVAA
RGLDVDRITHVINFDIPNDTESYVHRIGRTGRAGRTGEAILFVTPRERRMLRSIERVTNA
RLEEMELPTVDEVNAKRKENFANQITEVLGDGQMELFRGLVRKYSETNNVAMDDIAAALA
VKLQGGADFLVKDMPAPKRDRRDRDRFDRDDRGDRGGRGRDRDRGGRDRFDRDDRGGRHE
RRNDGDFETYRLDVGKRQNVRPGAIVGAIANEGGLSAKDFGRITIAVGHTLVDLPKKMDP
SVLDRLSDTRISGQLINIKKDTGRPPRDRDFDDRGGRGDRGGRGGRGGRDFRGGDRDRGG
RGRWRD
NT seq
2001 nt
NT seq
+upstream
nt +downstream
nt
atgagcattaccgataacgccaccggcggcgaaatggagccggaagataactttaaccag
tcggaatctcaggataaaacgcaaggtgatgcagtagatactgcacaggtcaccggggct
gcggatacttctgaggacaccggcgctgaggataagaactcagccaacgataatccccag
gggttcgccaatttaggtcttcctgacaacgttcaggacgccgtagccaaggttggatac
acaaccccttcaccaattcaagctgaaaccatcccaattttgatggaaggccgcgacgta
gtcggcctcgcacaaactggtactggtaagacggccgctttcgcgctgccagtcttgtcc
caaatcgataccaatgctcgccatccgcaggcattggtgctggctccaacccgtgagctt
gcgctgcaggtcgcagattcattccagtcatttgcaagccatttgggacgcatcgatgtg
ctgccgatttacggcggacaggcctacggcattcagctttcgggccttcgccgtggcgca
caagtcatcgtgggtacaccaggtcgtgtcattgaccacctggaaaagggttctctggat
atttcccagctgcgtttcctggtactcgacgaagcagacgagatgttgaacatgggcttc
caggaagatgttgagcgaatcctcgctgacactccggaagaaaagcaggtcgcactgttc
tcggcaaccatgccaaacagtattcgtcgcctgtcgaagaagtacttgaacaatcctgca
gaggtcactgtcaagactgaacgacgcacgaatgacaacattaagcagcgcttcttgttg
accccgcaccgcgcaaagctcgatgctttcactcgcatcttggaagtaacagactacgac
gcaatgatcgtgttctgccgcaccaagcatgagactgaagaagttgcagaaaagcttcgc
gatgcaggctacaacgccgcagccatcaacggcgatatcgcgcagaatcagcgtgagcgc
accgttgaccagctcaaggatggccgtctggacatcctggttgctaccgacgttgcagca
cgtggtctcgacgttgaccgcattacgcacgtgatcaacttcgatattccaaacgacacc
gagtcttatgttcaccgcatcggccgtactggccgtgctggacgtaccggtgaagcgatt
ttgttcgttactcctcgtgagcgccgtatgctgcgttccatcgagcgtgttaccaacgca
cgtttggaagagatggagttgccaaccgttgacgaagtcaacgcaaagcgcaaggaaaac
ttcgctaaccaaatcaccgaggttctcggcgatggccagatggaactcttccgtggccta
gttcgcaagtactccgagaccaacaacgttgcgatggacgatatcgctgctgcattagca
gtgaagctccaaggtggcgcagacttcctagtcaaggacatgcctgctcctaagcgcgac
cgtcgtgaccgtgaccgctttgatcgtgatgaccgtggtgatcgcggtggacgcggacgt
gaccgcgaccgtggtggccgtgaccgtttcgaccgcgacgatcgtggtggacgtcatgag
cgccgcaacgatggtgactttgagacttaccgtcttgacgttggtaagcgccaaaatgtt
cgtccaggtgcaattgttggcgctatcgccaatgagggtggcctgtccgctaaggacttc
ggccgcatcaccattgcagttggccacactttggtggatctgccaaagaagatggaccca
tccgtcttggatcgtctgagcgatactcgcatctccggtcagttgatcaatatcaagaag
gatactggtcgcccacctcgtgaccgcgacttcgatgaccgtggtggtcgtggtgaccgt
ggtggacgcggcggccgtggcggacgtgacttccgtggtggcgaccgtgaccgtggcgga
cgcggacgctggcgcgactaa
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