KEGG   Corynebacterium stationis: CSTAT_09385
Entry
CSTAT_09385       CDS       T04724                                 
Name
(GenBank) DEAD/DEAH box helicase
  KO
K03724  ATP-dependent helicase Lhr and Lhr-like helicase [EC:5.6.2.6 5.6.2.4]
Organism
csta  Corynebacterium stationis
Brite
KEGG Orthology (KO) [BR:csta00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:csta03400]
    CSTAT_09385
Enzymes [BR:csta01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     CSTAT_09385
    5.6.2.6  RNA 3'-5' helicase
     CSTAT_09385
DNA repair and recombination proteins [BR:csta03400]
 Prokaryotic type
  Other factors with a suspected DNA repair function
   DNA helicases
    CSTAT_09385
SSDB
Motif
Pfam: DEAD_assoc WH_Lhr WH4_Lhr DEAD WH3_Lhr Helicase_C WH2_Lhr ResIII DUF6406 PhoH AAA_25
Other DBs
NCBI-ProteinID: APT95507
LinkDB
Position
complement(1992443..1997452)
AA seq 1669 aa
MAKNVLSRFKPAVAGWFEDVFTEPTAVQEQAWDAISRGNHALLVAPTGSGKTLAAFLWAL
NNLIEREGQTSLPLAARNDGVGLGSEGGSTTNAGVKVLYISPLKALGVDIERNLRVPLAG
ISRVAQRLGVDEPDISIGVRSGDTPQPERNRQLRKPPDVLITTPESAYLMLTSKAAGILA
TVDTVIIDEIHAIAGSKRGVHMALTMERLAQVAGEFQRIGLSATVRPLETVANFLGGGRP
VEIIAPPAKKKWQLDIHVPVEDMSDLPTPEQGSTIGEMTVDDPLGITSQELVDAADSGLT
ESALPVASSIWPFIEQAIYDQVMEHRSTLVFVNSRRTAERLTSRLNEIWASIHDPESLSP
ELRRDPAQLMKAVDVAGKAPAVIARAHHGSVSKDERAMTETMLKEGALRAVVSTSSLELG
IDMGAVELVIQVESPPAVASGLQRIGRAGHVVGATSHGSFYPKHRADLLQTTVVVQKMVE
GGIEKLHIPTNPLDVLAQHTVAAVAAAPEGLTADDWYDTVIRAWPYRDLAREVFDSVIDL
VSGVYPSTDFAELRPRVVYDRITGVMTARPGAQRVAVTNAGTIPDRGMFGVFIAGGEGAP
RRVGELDEEMVYESRVGDVFTLGASSWRIEDITRDQVIVTPAPGHTGRLPFWSGDAAGRP
YELGQAIGAFRREAHANPELITHTDAWAKDNLRAFLHEQYEATGSIPDDSTLVMERFKDE
LGDWRIVLHSPFGRGVNAPWALAIGARIAERTGMDAQAVAGDDGIVLRLPEGEAEPDASI
FAFDPDEIEDIVTEQVGGSALFASRFRECAARALLLPRRNPGKRAPLWQQRQRAEQLLDV
ARKYPSFPIILETVRECLQDVYDVPSLVEVIREIAHRKVRIAEVTTEQPSPFASSLLFNY
TGAFMYEGDSPLAEKRAAALALDPALLAKLLGTVELRELLEPEIIAEVHAQLQRTDPTRR
PQTSEQVADMLRVIGPIPVDNLGEHTDVPLQTLHQQLSHRIMEVRIGGRMHLAQAQDAAL
LRDGLGIPVPPGTPAQVETITDALDQLVSRWARTRGPFVLRELADAFSLSVSIAHSTISR
MDSVIDGHYRRGVDEVEYCANEVLRVIRSRSLARARAQTEPVSAATFGRFLPDWNNVAPV
IEGATGNMRRPSLRGADGVYAVLEQLAGVRLPASAWESMVLPSRVGDYSPLMLDELTANG
EVLIVGAGKAGSSDPWVMLLPADYAAGLVPIQDEEISGLTGLQESILALLSRGGGFLFAD
IYRDTSISNERGLDVGVGAGSDAPTTDQVREALWGLVEMGLVSPDSFAPIRTRLSAHGSG
RSAHKQKRRPQRSRLRMGRTSFAQTQRANPTPPDMNGRWALTIPASHDATARSAAQGEAW
LDRYGVVTRGSVVSEDVLGGFALAYKVLSGFEESGKAMRGYVIEGLGAAQFSTPAVIDRL
RGLSDSPDITGWPSGTTTPDTVVLAACDPANPYGAALPWPQQGPSRAAGALVVLIDGLCA
AHLTRGGKTLTTFFDQLPEGIEHAQALEYVYRALMALISTGRFSPLVIEKANGTSIFDST
IANQFRALGAGISPRGIRLATKSAAPRVPNAPGTRREHGTTNAPGTFEWEVDAEPDTEAP
SPRRGRSINEALDELSFDDPPTEEPPQQRSSGPMRPRRGPQPPRGRGRR
NT seq 5010 nt   +upstreamnt  +downstreamnt
atggccaaaaacgttctttctcgcttcaagccagctgttgctggatggttcgaggatgtt
ttcaccgaaccgaccgccgtccaagaacaagcctgggacgctatttcccgaggcaatcac
gctttgctggtcgcacccactggttcaggtaagaccttggccgcattcttgtgggcgctg
aacaacctgattgaacgcgaaggccaaacttcactgccgcttgcagcgcgcaatgacggg
gtgggactcggctcagagggaggaagcaccaccaacgctggggtgaaggtgctgtacatc
tcgcctttgaaggcgcttggtgtggatattgaacgcaacctccgggtgccgttggcaggt
atttcgcgcgtggcgcagcgcctgggtgtggatgagccggatatatctattggcgtgcgc
tcgggcgataccccgcagccggagcgcaaccggcagttgcgcaagccgcctgatgttttg
attaccacgccggaatctgcgtatttgatgctgacctcgaaggccgcgggcattttagcc
acggtggatacggtcatcattgatgaaatccatgccatcgctgggtctaaacgtggggtg
cacatggcgttgaccatggaacgcctggcgcaggtagcaggggagtttcagcgcatcggt
ttgtctgccacggtgcgtccgctagaaacggtggcgaacttcttaggcggtgggcggccg
gtggagattattgcgccgccggcgaagaagaagtggcagttggatatccatgtgccggtc
gaggacatgtcggatctgcccacgccggagcaaggctccaccatcggtgagatgacagta
gatgatccattggggattacctcgcaagaacttgtcgatgccgctgattcgggtttaaca
gaatcggccctgccggtggcgagctctatttggccttttattgagcaggccatctatgac
caagtgatggagcaccgctcgacgctggtctttgtcaactcccggcgtaccgcagagcgc
ctgacctcgcggctgaatgaaatctgggcgtccattcatgacccggaatccttgtcgccg
gagctacgccgtgacccagcgcagctgatgaaagctgtggatgttgccggcaaagccccg
gcagtcattgcgcgagcgcatcacggctcagtatctaaagatgagcgcgcgatgactgag
accatgcttaaagaaggtgcgctgcgcgctgtggtgtctacgagttctttggaactgggc
attgacatgggtgcggtagagcttgtcattcaggtggaatccccaccggcggtggcttct
ggcctgcagcgcatcgggcgcgccgggcacgttgtcggtgctaccagtcatggttctttc
tatcccaagcacagagcggatcttctgcagaccacggtggtggtgcagaagatggtggaa
gggggcatcgaaaagctgcatatccccactaatcccttggacgttttggcgcagcacacc
gtcgccgcggtagctgcagccccagaggggctaaccgccgatgactggtatgacaccgtc
atccgggcctggccataccgggatttggcgcgtgaggtctttgactctgtcattgacttg
gtctctggcgtgtacccgtccactgattttgcggagctgcgcccacgcgtggtctatgac
cggattaccggtgtgatgaccgcgcggcccggcgcgcaacgggtggcggtgactaatgct
ggcacgattcctgaccgcggcatgtttggtgtgttcatcgccggtggtgagggcgcaccg
cgtcgcgtgggtgagcttgatgaggaaatggtttatgaatcgcgcgtcggcgatgtattt
accctgggtgcgtcctcgtggcgaattgaggacatcacccgtgaccaagtgattgtgact
ccggcgccggggcataccggccgcttgccgttttggtcgggcgacgccgctggtagaccg
tatgaattaggccaagcgattggtgcgtttcggcgtgaggcgcatgcgaacccggagctg
attacccatactgatgcgtgggcgaaggataacctccgtgcctttttgcatgagcagtat
gaggccacgggttcgattccggatgattccacgctggtgatggaacggtttaaagatgag
ttgggcgactggcgcatcgtgttgcactcgccgtttggccgcggggttaatgccccatgg
gcgctggcgattggcgcgcgcattgcagagcgcaccggcatggatgcccaggcggtggcc
ggcgatgatggaattgtgttgcgcctgccagaaggtgaggcggagccggatgcgtcgatt
tttgccttcgacccggatgagattgaagatatcgtcaccgagcaagtcggtggctcagcg
cttttcgcctcgcggtttcgtgaatgcgctgcccgggcattgctgcttcctaggcgcaat
ccgggaaagcgcgcgccgttgtggcagcagcgccagcgcgccgagcagcttttggatgtc
gcacggaaatatccatcatttcccatcattttggaaacagtgcgcgagtgcctccaagat
gtctacgatgtgccgagcttggtggaagtcatccgcgagattgcgcaccgcaaagtacgt
atcgcggaggtcaccacggagcagccttcgcctttcgcgtcctcgttgttgtttaactac
accggcgcatttatgtacgagggcgatagcccgctggcagaaaagcgtgcggcagccctt
gcccttgacccggcattattggctaagttattgggcacggtggagttacgtgagcttctt
gagcccgagattatcgctgaggtccatgcccagctgcagcgcaccgatcccacccgacgc
ccgcagaccagtgaacaggtcgctgatatgttgcgggttattggccccatcccggtagat
aatttaggtgagcacaccgatgtgccgctccagaccttgcaccagcaacttagccatcgc
atcatggaagttcgcatcggcgggcgcatgcacttagcccaagcccaagacgccgcattg
cttcgcgatggcctcggcattcctgtcccaccgggtacccccgcgcaggtagaaacgatt
actgatgccctcgaccagctggtatcgcgctgggcacgcaccagaggtccgtttgtgctg
cgagagcttgccgatgccttctccctctccgtctccatcgcgcattccacgattagccgc
atggactcggtcatcgacggccactaccgccggggcgtggatgaagtcgaatactgtgcg
aatgaagtcctgcgcgttattcgctctcgctctttggcacgtgcccgcgcgcagaccgaa
cctgtatctgccgcgacctttggccgcttcctaccggactggaacaacgtggcaccggtg
attgaaggtgccaccggtaatatgcgccggccctccctgcggggcgccgatggtgtctat
gccgtactcgaacaacttgccggggtgcgcctgccggcttctgcctgggaatcgatggtg
ctgccatcccgcgttggtgactattcacctctcatgctcgatgagctaaccgctaacggc
gaagtgctcatcgtcggtgcgggcaaagcaggctcttctgatccctgggtgatgctgctt
cctgccgattacgccgcggggctagtgcccatccaggatgaggaaatctcaggtcttact
ggattacaagaatctatcttggcgttgctctcgcgcggcggtggtttccttttcgccgat
atttaccgcgatacctccatttctaatgagcgcggattagacgtgggtgtcggcgctggt
agtgatgcccccactaccgaccaagtacgtgaagcactctggggactagtagagatgggc
cttgtcagccccgattcttttgcacctatccgcactaggctttccgcgcacgggtctggg
cgcagcgcgcataagcaaaagcgccgcccgcagcgctcccgcctgcgcatgggacgcacc
tctttcgcccaaacccaacgcgcgaaccccaccccgccggacatgaatggtcgctgggcg
ttgaccatcccggcgtcgcacgatgccacggcgcgctcggctgcccaaggcgaagcctgg
ctggatcgctacggcgtggtcacccgcggctcggtggtctctgaagatgtcctcggcgga
ttcgccctggcttataaggttctgtccggttttgaagaatccggcaaagccatgcgcgga
tacgtcattgaaggactcggtgccgcccaattttccacgccagcggtcattgaccggctg
cgcgggttgagtgattccccggatatcaccggttggccatctggcaccaccacgcccgat
accgtggtgcttgccgcctgtgacccggccaacccctacggtgctgctttgccatggccg
caacaaggaccatcgcgtgccgccggtgcgctcgttgtgcttatcgatggcctctgcgca
gcacacctcacccgcgggggcaagacactcacgaccttctttgatcagctgcctgaaggc
atcgagcatgcccaagcactcgaatatgtctaccgtgctctcatggctctgatttccacc
ggacgcttcagcccgctggtcatcgaaaaggccaacggcacttccatcttcgattccaca
attgcgaatcaatttcgcgcccttggcgctggtattagcccccgcggtatccgccttgcc
accaagtccgccgcccctcgcgtgcccaatgcgccgggcacgaggagagaacatggcacg
acgaatgcacccggtaccttcgaatgggaagtagacgctgagccggacaccgaagcgccg
agcccgcggcggggcagaagcatcaacgaggcactagacgagctcagcttcgatgatcca
ccgacggaagaacctccacaacaacgaagctctggaccgatgcgtccgcgccggggaccg
cagccgccacgaggaagaggaaggcgataa

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