Cydia strobilella (spruce-seed moth): 134740938
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Entry
134740938 CDS
T10503
Name
(RefSeq) transcription factor Sox-14-like
KO
K09267
transcription factor SOX1/3/14/21 (SOX group B)
Organism
cstb Cydia strobilella (spruce-seed moth)
Brite
KEGG Orthology (KO) [BR:
cstb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cstb03000
]
134740938
Transcription factors [BR:
cstb03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG SOX
134740938
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
HMG_box
HMG_box_2
HMG_WDHD1
DUF5549
SOXp
MMU163
Motif
Other DBs
NCBI-GeneID:
134740938
NCBI-ProteinID:
XP_063529664
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All DBs
Position
4:complement(21532704..21558320)
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AA seq
331 aa
AA seq
DB search
MSLGKQPAEHIKRPMNAFMVWSRGQRRKMAQDNPKMHNSEISKRLGAEWKLLTEMEKRPF
IDEAKRLRALHMKEHPDYKYRPRRKPKALVKKEPKFGFNISGLMAPVPRLLPPPLPMQLD
KPELSRALFPPLYPFYPFKLPPEDGKLAAELAHLQVMSVCGTFLFSTLNALYGGALYGSS
LYSSSLSPCGCPPRHTPSPPADVKRPVAYVLMKVHSLSPHRTPSPPADVKRPVAYVLMKV
QYTYSLKICPTLQLPVPASHALAPADVKRHVAYVLMKVHSLSPRRTPSPPADVKRLVAYV
LMKVQYTYSLKICPTLQLPVPASHALAPRGR
NT seq
996 nt
NT seq
+upstream
nt +downstream
nt
atgtcgttgggtaagcagcccgctgagcatataaagaggcctatgaacgcttttatggtg
tggtcgcggggacagcggaggaagatggcccaggacaacccgaagatgcataactcggag
atttcgaagcggcttggggctgaatggaaactgctcacggagatggagaagcggccgttt
atagatgaagcgaagcggttgagagccctccacatgaaagagcaccccgactacaaatac
cgtccacgccgaaaacccaaagcgctcgtcaagaaggagccgaaattcgggttcaacatc
agcgggctgatggcgccggtgccgcggctgctgccaccgccgctacccatgcagttggac
aagcctgagctaagccgcgcgctgttcccgccgctttaccctttctacccgttcaagctg
ccacctgaggatgggaagctggcggcggagcttgcgcatttgcaggtaatgtctgtatgt
ggaacttttcttttttctacactcaatgccctttatggcggcgccctctacggcagctcg
ctatacagcagctcattgtccccctgcggctgccccccgcgccacacgccctcgcccccc
gcggatgtcaagcggcctgtggcctacgtcctcatgaaggtgcactccctgtctccgcat
cgcacgccctcgccccccgcggatgtcaagcggcctgtggcctacgtgctcatgaaggtg
cagtatacatatagcttaaaaatctgtcctactctacagctccctgtccccgcgtcgcac
gccctcgcccccgcggatgtcaagcggcatgtggcctacgtgctcatgaaggtacactcc
ctgtccccgcgtcgcacgccctcgccccccgcggatgtcaagcggcttgtggcctacgtg
ctcatgaaggtgcagtatacatatagcttaaaaatctgtcccactctacagctccctgtc
cccgcgtcgcacgccctcgccccccgtggacgttaa
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