Cydia strobilella (spruce-seed moth): 134741025
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Entry
134741025 CDS
T10503
Name
(RefSeq) RB1-inducible coiled-coil protein 1
KO
K17589
RB1-inducible coiled-coil protein 1
Organism
cstb Cydia strobilella (spruce-seed moth)
Pathway
cstb04140
Autophagy - animal
Brite
KEGG Orthology (KO) [BR:
cstb00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
134741025
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
cstb01009
]
134741025
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cstb04131
]
134741025
03029 Mitochondrial biogenesis [BR:
cstb03029
]
134741025
Protein phosphatases and associated proteins [BR:
cstb01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
134741025
Membrane trafficking [BR:
cstb04131
]
Autophagy
Autophagosome formation proteins
ULK complex
134741025
Mitochondrial biogenesis [BR:
cstb03029
]
Mitochondrial quality control factors
Mitophagy factors
Parkin-independent mechanism factors
134741025
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ATG17_like
ATG11
ubiquitin
TBK1_ULD
Motif
Other DBs
NCBI-GeneID:
134741025
NCBI-ProteinID:
XP_063529824
LinkDB
All DBs
Position
4:complement(8218428..8254530)
Genome browser
AA seq
1321 aa
AA seq
DB search
MLYVFHVDAGQMTTYDMNLTLQSVSSLKAAIERKTKIAASSLVLLVSGGEVLQSDHMVSS
YSAGTDTNPIYMFSKPSEKESHLKQSMYSDLSPIVELSSGEFRSDTRSGVEGKSLAELKA
NVDMCCSLQPTVNTVIKCATLAQQFSDLAHDVSKSCDQLVHEQHLQHQGWSAVVANLEDI
FNEFCERSRNFKESFRKHRLKKDEYHEQLTALNEVLESLGKIPILPALQLNAEAHRFSAF
DVFEETDFEGQYYRISQPLDGSEKTNQDFGVEAFKLSEEEDVFGHKDASTSKGAEHAPAP
AEPIEESDEGVTFKAHSYENKEEPTLLHWILAQGNKASLHDILDYCQKGLALIDAEPLKE
LEEELCNVLEYANVHGLKQIKGIEDRLYRLDQLLSEVKKLERDQHDQAASLIQYRERLNA
ACDPSVLPTLVQSHWCQLEKLLKGHQTLVDIRRRISKSKDELSHILKARLKAVLMIENSM
SVQDAHAMLSFQCFNRLARYFDIVAQLHRAPVVYVRAVHEVARRRMFSQAHLKWATDLAA
KLIKIHEEEIIRRQDFNCLFEGHFLKSLFPGMTELPPAFATQSPPAFDARLPQVTDEDVE
LIATAFPQLAKDVPNYDMETTVKFFQQRISSSDHQERDIDVQVDFEKDFESETDVGDFER
LSRQSTSQKQRVDTSTICVPDTMAVSTVTEDNMDTHKINMERLQDFLLKLYGICRVNIVL
IREELARFKQEIDEQKKFIKGKYIEILEAWQKESEDNALKFREQTQRLTVDHELELSDMK
AALNGKDDVIETLKKEKEELKTLHQSDIERLETEHNSTKELLEKTREEIKLFEKKLEEAD
VQKQKELKEAQEKMHLEYKAEIESLRSRYRLVALTNMDRSPSESSLEKIERSDVIEITSH
NAIVMQTKENAEVEKEEAIAKVTAELQQKFTEEINALKAKYEAEKQITINDVTRRLLSEK
DRQLDELREREHLLSRECSKYRDTIRQLTDPETNDCDPLLRSQLATLENEKALLQQQVKD
LKKELEKKFEEADKAKEEDSEGRSSSPAREGKKRGRCHTPFGLSAGTLSLSSCLPGHTVL
VMWDPDHYNYTVMQEASIMYFVHSDCLPALDLSIQVKHESDRRLYAVAVVESKEYCYAKK
SGNRYHMPRASRFYRVRVRPLRPAPPPPPCCDHRHKPDVMHRSALPVFGENRPLKKWFTY
MHAPDMSKSVDTSQSTSSNTDEASKEVATATLINLESPVSTSENTAPGEDQLDSIEANDQ
WHTARMQASTASALTDMECSVGRVAGGCGGTEPLELAVGAGSVVARGGPGPHEELAEEAA
P
NT seq
3966 nt
NT seq
+upstream
nt +downstream
nt
atgttgtatgttttccatgtggatgctggtcagatgaccacatatgacatgaatctcacg
ctgcagagtgtgtcaagtttaaaagcagcgattgaaagaaagacaaaaatagcggcaagc
tcccttgttctcctcgtaagtgggggggaggtgctgcagtccgaccacatggtgtcttca
tacagtgccggcacagacacaaatcccatatacatgtttagcaaaccatcggagaaggag
agccatttgaagcaatccatgtacagcgaccttagtccaatagtggagctaagttcaggc
gagttccggagtgacacccgaagcggagtggaggggaaatccctagcggagctgaaagcg
aacgttgacatgtgttgttcacttcagccgaccgtcaacactgtgataaagtgcgcgacg
cttgcgcagcagttcagtgatctcgcccacgatgtttccaagagctgcgatcagttggtg
catgaacagcatttgcagcatcagggttggtcggcggttgtggcgaatttagaagacata
ttcaacgaattctgcgagagatctagaaatttcaaagaatcattcagaaaacatcgctta
aaaaaagacgagtaccacgaacaattgactgctctcaacgaagtgttagaatctttaggc
aagattccaattctgccggctctccaactgaacgcggaggcgcaccggttctcggccttc
gacgtgtttgaggagacagacttcgaaggtcaatattataggataagtcagcccttagat
gggtcggagaagacgaatcaagactttggagtagaggcgttcaaattatcggaagaggaa
gatgtgttcggccataaagacgcatcaacaagcaaaggcgccgagcatgcgccagcgccc
gccgagcccatcgaggagtccgacgaaggggtcacgttcaaagcccactcttatgaaaac
aaggaggaacctaccttactacactggatattggctcagggcaacaaggcttcgttacat
gacattttagattactgccaaaaaggattggcactgattgacgcagagcctctcaaagaa
ttggaagaggagctatgcaacgtgctagaatacgccaatgtgcacggcctaaagcagatc
aaaggcatcgaggaccgtctgtaccgtctagatcagctgctcagcgaagtgaagaaactc
gagcgcgaccagcacgaccaggcagcttcgctaatacagtaccgagagcgattgaacgcc
gcatgcgacccgtcagtattgccaacactggtgcagtcacattggtgccaactcgaaaaa
ctgctcaagggacaccagactttagttgatattagacgacgaatatccaagtcaaaagat
gaactgtcgcatatattgaaggcgagattaaaggcagtcctaatgatcgagaactcgatg
tcggtgcaggacgcgcacgccatgctcagcttccagtgcttcaaccgtctggcgcggtac
ttcgacatcgtggcgcaactgcaccgcgcgcctgttgtctacgtccgcgccgtgcacgag
gtcgcgaggcggaggatgttctcgcaggcgcatttgaagtgggcaacagacttagcggcg
aaactaataaaaatccatgaagaagagatcatacggcggcaagacttcaactgcctgttc
gaagggcacttcctcaaaagcttattcccgggcatgacggagctaccgccggccttcgcc
acgcagtcgccgccggcgttcgacgcgcggctaccgcaggtcacggatgaggatgtggag
cttatagcgacggcgttcccgcagttggctaaagatgtgccgaattacgatatggagacg
actgttaagttctttcagcagaggataagttcttcagatcaccaggaaagagatattgat
gtccaagtagattttgagaaggactttgaatcagagacagacgtaggcgactttgagcgt
ctcagccgacagagtacatcacagaaacagagagtggacacatcgaccatatgcgttccg
gacaccatggccgtgtccacggtcactgaggataatatggatactcacaaaataaatatg
gaaaggctccaagacttcctcttgaaattatatggcatatgtagagttaatattgtctta
attcgagaagaactagctagatttaaacaagaaattgacgaacagaagaagtttataaaa
ggaaaatatatagaaattttagaagcgtggcagaaagagagtgaagataatgctttaaaa
ttccgtgaacaaacgcaacgcctgactgtggaccatgagttagaacttagcgatatgaag
gcagccctcaatggtaaagatgacgtcatagaaactttaaagaaagaaaaggaagaatta
aaaacacttcaccaaagtgacattgaaaggttagaaacagagcacaacagtacaaaagaa
ttattagaaaaaactagagaggagattaagttgtttgagaagaagctagaagaggctgat
gttcagaaacagaaagagttgaaagaggcgcaggagaaaatgcacttggaatataaagcg
gagatcgagtcgctgcgctcaagatatcgtctcgtagccctaacaaatatggaccggtcg
ccatcagagtccagcctcgaaaagatcgagcggtcggacgtgatagagataacgagtcac
aatgctatagttatgcagacgaaagaaaatgccgaagtggagaaggaagaggcgatagcc
aaggtgacagccgagttacaacagaagtttactgaggagatcaatgcgctcaaggcgaag
tatgaagcagagaaacagataacgataaacgacgtgacccggcgtctcctctccgaaaag
gatcgccagctcgacgaactacgcgagcgggaacatctactgtcgcgcgagtgctccaag
taccgggacaccatccgacagctcacagaccccgagaccaacgactgcgacccgctgctg
cgatcacaattggcgacgcttgaaaacgagaaggctctgctacagcagcaagttaaagat
ctgaaaaaggaactcgaaaagaaattcgaagaagcagacaaagctaaggaggaagacagc
gaaggaaggtcgtcgtcgccggcacgcgagggcaagaagcgcgggcgctgtcacacgccg
ttcggtctgtcggccggcacgctgagcctgtcctcctgcctgcccggacacaccgtgctc
gtcatgtgggaccccgaccactacaactacaccgtcatgcaggaagcgtcaataatgtac
ttcgtgcacagcgactgtctcccagccctcgacctcagcatacaagtgaagcacgagtca
gatcgccgtctctacgccgtggccgtcgtcgagtccaaggagtattgctacgctaaaaag
agcgggaaccggtaccacatgccgcgcgcgtcgcgcttctaccgcgtgcgggtgcggccg
ctgcggcccgcgccgccgccgccgccctgctgcgaccacaggcacaagccagatgtaatg
catcgcagcgctctgccggtgtttggtgagaatcgcccgctcaagaaatggtttacctac
atgcatgcaccagacatgtcaaagtcggtcgacacgagccaatcaacaagctcgaacacc
gacgaagccagcaaagaggtcgccacggccacgctcatcaacctggagtctcccgtgtcc
accagcgagaacacggcgcccggcgaggaccagctggactccatcgaggccaacgaccag
tggcacactgcgaggatgcaggcttcaactgctagcgctctcacggacatggagtgcagc
gtggggcgcgtggcgggggggtgcggggggacggagccgctggagctggcggtgggcgcg
gggtccgtggtggcgcgcggcgggcccgggccgcacgaggagctggccgaggaggccgcg
ccctga
DBGET
integrated database retrieval system
