Cydia strobilella (spruce-seed moth): 134741032
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Entry
134741032 CDS
T10503
Name
(RefSeq) collagen alpha-1(IV) chain
KO
K06237
collagen type IV alpha
Organism
cstb Cydia strobilella (spruce-seed moth)
Pathway
cstb04382
Cornified envelope formation
cstb04512
ECM-receptor interaction
cstb04518
Integrin signaling
cstb04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
cstb00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
134741032
04518 Integrin signaling
134741032
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
134741032
09150 Organismal Systems
09158 Development and regeneration
04382 Cornified envelope formation
134741032
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
cstb04147
]
134741032
00536 Glycosaminoglycan binding proteins [BR:
cstb00536
]
134741032
Exosome [BR:
cstb04147
]
Exosomal proteins
Exosomal proteins of other cancer cells
134741032
Glycosaminoglycan binding proteins [BR:
cstb00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
134741032
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Collagen
C4
Motif
Other DBs
NCBI-GeneID:
134741032
NCBI-ProteinID:
XP_063529839
LinkDB
All DBs
Position
4
Genome browser
AA seq
1841 aa
AA seq
DB search
MAVHLLCLVAALPLIGVNTQDDSWYAQRNEINSNPGYYPTGSYPTRNTYPQYPDASRDTY
PQYPDASRNSYPQYPDASRNSYPDPRYNYGASPSQQLGPQPPAAREPYGAHYDPITKQRV
TPHPNCTARASCQPLCLAQKGAKGKQGSFGPPGPTGLPGHEGPEGPSGPKGQKGEIGSVG
PRGPKGDRGKPGQQGFQGFAGRPGLQGDPGRAGDRGRDGCNGTDGDAGPQGERGYPGPRG
FPGTPGSKGDKGESAAVGRYPKGDKGEPGSAGEQGPVGPIGPTGETGPLGVRGRPGYAGS
PGQPGEKGAKGPKGLSIKGDKGDRGDQGKKGQACSEKPLHVEVEKGAILGTQGDKGDKGT
KGEPGMQGEKGYTGETGEQGLPGLIGPKGEKGIRGNTGERGRVGQFGASGQRGQKGDRGN
EGLRGRDGRPGSKGEPGKDGVPGLRGLTGVPGPPGGSTGSVVGPPGPIGPRGNSGAPGAR
GTDGNPGEPGRPGPMGPPGGQGVPGTPGREGPPGMKGDKGDTGPEGKPGPAGLQGYNGQD
GYPGERGQKGDSGISIPGDRGPSGQSGLPGQKGQKGDRGYQGLRGSPGNSTLGTPGMPGD
VGPRGRKGDKGNPGQPGYPGEPGTKGDRGGVCNDCRPGAPGQKGDRGFDGLSGTPGERGP
QGPPGVPGQRGPDGLHGLPGTPGEPGKQGDDGPMGPPGSPGLPAMIPSNLVKGPPGEKGE
RGLPGIRGPKGDQGLAGPPGSKGTIGMPGYKGDQGLSGAPGIDGTPGRHGRPGTPGEKGL
SIKGEKGTPGEPGLSGDKGFPGRMGLKGEPGQCPANLRELTKGDRGAPGAQGPPGPAGIP
GEKGDQGYTGLKGDKGELGAQGKEGPVGPRGLPGARGEKGSMGIMGSPGSPGEKGLRGIP
GLPGTRGLKGETGLSMPGPPGPSGNDGLKGDKGLRGVPGNNGNDGPPGWNGLPGEKGDSG
RPGIAGPTGPQGLKGEPGPAGPPGMSGIPGTPGPVGDKGQAGYPGMPGQPGVIGLPGKTG
EPGIQGPDGPRGFPGRRGPAGLPGTPGQDGEPGQKGDRGPPGFTGEPGSPGMDGIPGLVG
ASGEKGDQGFEGPPGLTGPMGPKGDKGDRGFTGAQGPRGEPALPSEKGQKGEAGLTGLRG
FTGTPGRNGTKGDKGNAGFPGFGRPGPAGEKGDAGTPGPQGFTGEQGLTGDRGFTGATGE
KGDIGLPGNDGWPGIDGKDGLPGKPGDRGLTGAPGAPGERGDTGEPGMDGINGINGKDGP
IGPPGAPGPVGYPGLKGERGLPGVAIDVKGEKGNQGLPGAPGYPGQKGDRGFSGEAGIAG
DKGEIGYQGEKGSTGQYGFPGDKGDTGPAGPAGLPGLTIKGEKGLHGIPGKHGRPGPQGA
PGEKGDRGLTGLPGPSGFPGTPGRPGDRGEKGDLGMEGVAGPPGFDGPPGQPGPRGFTGI
KGERGEKGETVMGYPGEKGNQGPPGEPGMPGLPGEKGDSGIDGRDGPPGEPGLPGEKGDR
GFNGFPGQPGMQGIKGDKGESGQIVLGPKGDRGPPGFSGLNGPPGENGMPGPPGMDGING
EKGDRGMTGPQGPPGPPGETGATGYQGDRGEIGLAGEPGPPGIPGQSCTSTDFMTGILLV
KHSQSDIIPQCEPGHIKLWEGYSLLYIDGNEKSHNQDLGYAGSCVRKFSTMPFMFCDVTG
TCNYASRNDRSYWLATGRPTLMMPVEGDTIQEYISRCVVCEAPTNVIAVHSQSDIEPPCP
GGWSLLWAGYSFVMHTGAGAQGGGQALASPGSCLQDFRATPLIECNGEAGTCHHFANLLS
FWLTIIDDSAPFGAPPRRATHKGDFNSRSQVSRCSVCIKNS
NT seq
5526 nt
NT seq
+upstream
nt +downstream
nt
atggcggtccacttgctgtgtttggtggccgcgctgcccctaattggagtcaacacgcaa
gatgattcgtggtacgcacagcggaacgaaataaattctaaccccggatactatcccacg
ggaagttatccaacgaggaacacataccctcagtatcctgatgcatctagagacacatac
ccccaatacccagatgcgtccaggaactcataccctcaatacccggacgcatctaggaac
tcatatccggacccgaggtacaactacggggcgtcgccgtcccagcagctggggccgcag
ccgccggccgcacgcgagccctatggcgcccactacgaccctatcaccaagcaacgcgtt
acgccgcacccaaactgcacggcgcgcgcctcttgtcaaccattgtgtcttgcgcagaaa
ggcgctaagggaaaacaaggttctttcggaccgcctggacctacaggattacctgggcac
gagggacctgaaggaccatcgggtccaaaaggtcaaaaaggagaaattggttcagtaggt
cctcgagggccgaaaggtgacagaggaaaacctggtcaacagggattccaaggttttgcg
ggacgtcctggactacaaggtgacccgggcagggccggcgaccggggcagagatggttgc
aacggtacagacggtgatgcgggtcctcaaggcgagagggggtatccaggacctcgcggt
tttccgggtactccgggatcaaaaggagacaagggagaatcggcagccgtcggaagatat
ccaaagggtgacaagggagagcccgggtctgccggagaacagggtcccgtcggtccgata
ggacccacaggagagaccggcccgctaggcgtacgcggtcgaccaggatacgcgggatct
ccaggtcaaccaggtgaaaaaggtgctaagggtccaaaaggtttatcgataaaaggtgac
aaaggtgatcgaggagaccaaggcaagaagggtcaggcttgttcggaaaaacctttacat
gtggaagtcgaaaaaggagccatcctgggaactcaaggtgacaaaggagataaaggtaca
aagggtgaaccagggatgcagggtgaaaagggatatacgggagaaacaggcgaacaaggg
ttacccggtctgataggaccaaaaggagagaagggtattcgtggaaacactggtgagcga
ggtagagtcggccagtttggtgcaagtggacagagaggacaaaagggtgacagaggtaac
gaaggcctgagaggtcgtgatggcagacccggatcaaagggagagccgggcaaagacgga
gttccaggcttgagaggtcttaccggtgtgcccgggccacccggtggcagcacagggtca
gttgttggcccgcctggtccgatcgggcctcgaggtaattctggcgcaccgggtgcaaga
ggcacggacggaaatcccggcgaaccgggccggcccggcccgatgggcccaccgggagga
cagggagtccccggcacaccaggacgagaaggcccacctggaatgaaaggcgacaaagga
gatactggacccgaagggaaacctggacctgctggacttcaggggtacaatggacaggac
ggatatccaggcgagagaggacaaaagggcgacagtggcatttcgattccgggtgatcga
ggaccaagtggacaatcgggattacccggacagaaaggtcaaaaaggagaccgaggttac
caaggattgagaggctctcctggtaattcaacattaggaaccccgggtatgcctggggat
gtcggaccacgcggaagaaaaggagacaaaggaaacccaggtcaaccaggatatccgggt
gagccgggaactaagggagacaggggcggtgtctgcaacgactgtagaccaggagcgccc
ggtcagaaaggtgaccgaggatttgatggcttgtccgggacgccgggagagcgaggcccg
caaggaccccctggcgtgcccggccaacgcggtcccgacgggcttcatggattaccggga
acaccaggagagccgggtaaacaaggtgacgatggtccaatgggacctcctggaagccct
ggtctgcctgcaatgattccgtcaaatctcgtaaaagggcctcctggagaaaagggtgaa
cgaggtcttccgggaatcagagggccaaaaggagaccaaggacttgctggccctcccggc
agtaaaggcacaataggcatgccaggttacaagggtgaccaaggattgtccggcgcccct
ggaatcgatggaaccccaggaagacacggtcgaccaggtacccctggtgaaaagggtctt
tcaataaagggcgagaaaggtacccctggagagcccggactgtcaggagataaaggattc
ccgggaagaatgggtttgaagggtgaacctggccagtgtcctgcgaatttaagggaactt
acaaaaggtgacagaggggcgcctggcgcacaaggaccgccgggaccagctggcatacct
ggggaaaagggagaccaaggctacacaggtctaaaaggagataagggtgaattgggtgct
caaggaaaagagggaccagttgggccacgtggtcttccaggagctcgaggtgaaaaagga
agcatgggaattatgggctccccaggatcgcccggtgaaaagggcttgaggggtatccct
ggtcttccaggtacgagaggccttaaaggagaaactggcctttctatgcctggcccgcct
ggaccttcgggtaatgacggactaaaaggtgacaagggtttgagaggtgtacctggaaat
aatggaaatgatggaccacccggttggaatgggcttccaggcgaaaagggagatagtggt
cgaccaggcattgcagggccgactggcccacaaggtcttaaaggagaacctggacctgca
ggtcccccggggatgagtggtattccgggaacgcctggacctgttggcgacaaagggcaa
gctggctaccctggaatgcccggacaacccggagtcattggccttcctggaaagacaggt
gaaccgggaattcagggtcctgatgggcctcgaggtttccctggaagacgaggaccagct
ggacttcctggtactcctggtcaagatggtgaaccaggacagaagggagataggggacct
cctggtttcactggtgaaccaggctcgcctggcatggacggcatccctggtctagtgggt
gcttctggtgaaaagggtgatcaaggctttgaagggccaccgggactgactggcccaatg
ggaccaaaaggtgataaaggagatagaggtttcacgggagctcaaggccctagaggagaa
cccgccttaccttcagaaaaaggacagaaaggagaggccggtttaactggactacgcggt
tttactggaacaccaggtagaaatggaacaaaaggagacaagggtaatgcagggttccct
ggatttggcagacctgggcccgctggagaaaaaggtgacgcaggcacgccaggtccacaa
gggtttactggagaacaagggttaacgggcgatcgtggatttactggtgccacaggcgaa
aagggtgacataggtttacctggtaacgatgggtggccgggaatagacggaaaagatggg
ttaccgggtaagcctggcgacagaggtctaacgggtgcacctggtgcaccaggcgagaga
ggagatactggggaacctggaatggacggcattaatggaataaatggaaaagatggcccg
atcggcccgccaggagctccaggacctgtaggatatcctggccttaaaggcgaaagaggt
ttgcctggtgtcgcgatagacgtgaaaggagaaaaaggaaaccaaggtttgccaggtgcc
ccaggctacccaggtcaaaagggtgacagaggtttctccggagaagctggtattgcaggc
gacaaaggggagattggataccaaggagagaagggttcaactggacagtatggattccca
ggagataagggtgacactggacctgctggacctgctggcctgcctggattgacaattaaa
ggagagaagggtcttcacggtattcctggcaaacacggacgacctgggccacagggcgcc
cccggagagaagggtgaccgaggcttaacaggtcttccgggaccttcaggtttccccggg
actccgggcagaccgggagatcgcggcgagaagggtgacctgggcatggaaggcgttgcc
ggcccgcccggctttgacggaccaccaggtcaacctggccctcgtggttttactggcatc
aaaggtgaaaggggtgaaaagggcgagaccgtgatgggatatccaggcgaaaaaggaaac
caagggcccccaggcgaaccaggaatgccaggattacccggggagaagggtgatagcgga
atcgacgggcgtgatggaccgccaggagaaccaggtctaccaggtgaaaagggtgatcga
ggattcaacggtttccctgggcagccgggtatgcaaggcattaagggtgacaaaggagag
tcagggcagatcgtactcggccccaaaggagatcggggaccgccaggtttctctggatta
aacggaccaccgggtgaaaacggcatgcccggcccgcctggcatggacggtataaacgga
gaaaagggcgacagaggcatgacgggaccgcagggcccgcccggtccacctggcgagact
ggagctacgggataccaaggtgaccgaggcgaaatcggtttagcgggagaacctggcccg
cctggaattcctggacaatcatgtaccagtacagactttatgaccggaatactcctggtg
aagcacagtcaaagtgatattatccctcaatgtgaacctggccatatcaaactatgggaa
ggatattcgctattatacatagacggtaatgaaaagtcccataatcaagatttaggttac
gctggatcttgcgtaagaaaattcagtacaatgccattcatgttttgtgacgtgactgga
acgtgtaactatgccagtagaaacgatcgcagttactggctggcgactggaaggccgacg
ttgatgatgcccgtggagggagataccattcaggagtacatttcaagatgcgttgtttgc
gaagcgccgacaaatgtaattgctgtacacagccaaagtgacatcgaacctccctgtcca
ggaggttggagcttgttatgggcgggatacagttttgttatgcacactggcgcgggcgcg
cagggcggcgggcaggcgctggcgagccccggctcgtgcctgcaggacttccgcgccacg
ccgctcatcgagtgcaacggcgaggccggcacctgccaccacttcgccaacctactcagc
ttctggctcacgatcatcgacgacagcgcgcccttcggcgcgccgccgcggcgggccacg
cacaaaggagacttcaactcgcgctctcaagtgtctcgatgctcagtgtgcatcaagaac
tcataa
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