Cydia strobilella (spruce-seed moth): 134741518
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Entry
134741518 CDS
T10503
Name
(RefSeq) DEAD-box helicase Dbp80
KO
K18655
ATP-dependent RNA helicase DDX19/DBP5 [EC:
5.6.2.7
]
Organism
cstb Cydia strobilella (spruce-seed moth)
Pathway
cstb03013
Nucleocytoplasmic transport
cstb03015
mRNA surveillance pathway
Brite
Enzymes [BR:
cstb01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
134741518
Messenger RNA biogenesis [BR:
cstb03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
134741518
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
AAA_30
PP-binding
Motif
Other DBs
NCBI-GeneID:
134741518
NCBI-ProteinID:
XP_063530391
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All DBs
Position
5:complement(16863195..16865179)
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AA seq
466 aa
AA seq
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MANQWGQKAEELEISNKVAGLGLKQEPYNQTTESEESDDAANPAETSLLMKIIRQGLVES
KLDIEVQRKDPNSPLYSVKTFEALHLKPNLLKGVYSMGFNAPSKIQETALPTLLADPPQN
MIAQSQSGTGKTAAFVLAMLSRVDTNHNYPQVLCLSPTYELAIQTGEVAAKMAKFCPEIK
LKYAVRGEEVPRGTKITDHIIIGTPGKMLDWSVKFNMFDLSKIKVFVLDEADVMIDRQGH
QDQCIRIHKCLPSTCQMMFFSATYDAAVMEFAEIIVPNPIIIRLLREEESLDNIKQYYVK
CKTAEEKYRAICNIYGVITIGQAIIFCHTRKTAGWLSEKMSKDGHSVAVLSGELTVEQRI
AVLDRFRAGLEKVLITTNVLSRGIDVEQVTLVVNFDMPMDVEKRADCETYLHRIGRTGRF
GKAGIAINLIDSALAMQICLAIEKHFGKKIQLLDIEDAEEIEKIGA
NT seq
1401 nt
NT seq
+upstream
nt +downstream
nt
atggcgaatcagtggggtcaaaaagccgaggagttggagatttccaacaaagttgcaggt
ttaggattgaagcaagagccatataatcaaacaacagaatctgaagaatcagatgatgca
gcaaatccagcagaaacttcgttgctgatgaaaattatccggcagggtctagttgaatca
aagttagacattgaggtgcaaagaaaagatcctaattcacctttatactccgttaagact
tttgaggctctgcatttgaaaccaaatttgcttaaaggtgtttattctatgggtttcaat
gcaccttctaaaattcaagaaactgctctacctactctcttagctgatcctcctcagaac
atgattgctcaatctcagtcaggaacaggaaagactgcagcatttgtgttggcaatgttg
agtagagtggacacaaaccataactatcctcaagtcttgtgtctcagcccaacatatgag
ctggctatccagacaggtgaagtagcagccaaaatggctaagttctgtcctgaaattaaa
ttgaaatatgctgtcagaggagaagaagtgccaaggggcaccaagatcacagaccacata
attattgggactcctggtaaaatgttggattggagtgtcaagtttaacatgtttgatctg
agcaagattaaagtgtttgtattggacgaagctgatgtgatgattgaccggcaggggcac
caagaccaatgcattagaatccacaagtgtttaccttccacttgtcaaatgatgtttttc
tctgctacatatgatgctgctgttatggaatttgcagagatcatagtgcccaatccaatc
attatcagattattgagagaggaagaatctctagacaacataaagcagtattatgtaaaa
tgcaaaaccgcagaggagaaatatagggctatttgtaacatttatggtgttattactatt
gggcaagcaattatattttgtcacacaagaaagactgctggttggttgtctgagaaaatg
tctaaagatgggcactctgttgcagtgttgtctggggagctgactgtggagcaaagaata
gcagtccttgaccgcttccgagctggtctggagaaagttcttatcacaactaatgtgctg
tccagaggcattgatgtggagcaggttactttggtagttaactttgatatgcccatggat
gtggagaagagagcagactgtgaaacatatctgcacagaattggacgcacaggaagattt
ggaaaggctggaatagcaatcaatttaattgactctgctctggctatgcaaatttgcttg
gctattgaaaaacattttggcaaaaagattcagttacttgacattgaagatgctgaagaa
attgagaagattggagcctaa
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