Cydia strobilella (spruce-seed moth): 134741586
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Entry
134741586 CDS
T10503
Name
(RefSeq) exosome complex component RRP43-like
KO
K12586
exosome complex component RRP43
Organism
cstb Cydia strobilella (spruce-seed moth)
Pathway
cstb03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
cstb00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
134741586
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cstb03019
]
134741586
Messenger RNA biogenesis [BR:
cstb03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
134741586
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
Motif
Other DBs
NCBI-GeneID:
134741586
NCBI-ProteinID:
XP_063530492
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Position
5:complement(19896075..19940408)
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AA seq
281 aa
AA seq
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MAEIYKLIHPVKHFNDYISRDIRPDGRKFQEQRNLKLNVDSLKTADASAVVKCGNTTVVC
GIKLELAIPKAEEPDVGYLITNVELPPLCSSKYRPGPPSDHAQITSNLVSDIVINSKCVD
LKDLCIVPDKLAWVLYCDMVCLDNDGSLVDACIMTLIASLKTLSLPHVIYDHETEDFTVD
TTVTKPLTVHGMPVTTSFAVCQSNQSNVILTDPSSYEEEMCGGIGSNLIVCYNNGTLCGV
QKLGGRNLSNDIQEDALNIARQRSKLAEEVINTCIKNQLKS
NT seq
846 nt
NT seq
+upstream
nt +downstream
nt
atggcagaaatatataagttaatccatcctgtgaagcatttcaatgactacatatcaaga
gacataagacctgatggaaggaagtttcaggaacagcgcaacttaaaactcaatgtagat
tccttgaagactgcggatgcatctgctgttgtcaaatgtggaaacacaacagttgtttgt
ggcattaaattggaattagcaatccctaaagctgaggaacctgatgttggatatctaatt
acaaatgtggaactaccaccattgtgctcatccaaatacagacctggaccaccctctgat
catgcacagatcacaagcaacttggtgtcagatattgtcataaactccaaatgcgttgac
ctgaaagacctttgcattgtgccagataaattagcttgggtattgtactgtgacatggtg
tgcttggacaatgatggaagcctggtggatgcatgcattatgactttgatagctagtctc
aaaacattgtctttaccacatgtaatttatgaccatgaaactgaagatttcacagtagac
acaactgttacaaagccgttaacagtccatggaatgccggtgacaactagctttgctgtt
tgtcagagtaatcaaagtaatgtcatccttactgatccatcaagttatgaagaagaaatg
tgtggtggaattggatctaatttgatagtttgttacaacaatggtacattatgtggagtt
caaaaactaggcggacgcaacctgtcaaacgatatacaagaggatgccctgaacattgcc
aggcagagatcaaaacttgctgaagaagtcattaatacatgtattaaaaatcaattgaaa
tcatga
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