Cydia strobilella (spruce-seed moth): 134741609
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Entry
134741609 CDS
T10503
Name
(RefSeq) nuclear pore complex protein Nup50 isoform X1
KO
K14295
nuclear pore complex protein Nup50
Organism
cstb Cydia strobilella (spruce-seed moth)
Pathway
cstb03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
cstb00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
134741609
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cstb03019
]
134741609
Messenger RNA biogenesis [BR:
cstb03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
134741609
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NUP50
Ran_BP1
Motif
Other DBs
NCBI-GeneID:
134741609
NCBI-ProteinID:
XP_063530522
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Position
5:22664162..22666514
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AA seq
557 aa
AA seq
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MSAKRAATTELNHDNWDQDDPDEHEEMGTFKPAAKEAIEKRVIRTAKRRNQNPSEGVKQG
VFSGFGGFSKAQPSSFDFLANLTNGSKPVNGSASSKTDTAVSSSGSNSSLATSSPSGGLF
TLPVSSSSSKSLFNPTSQSSSLFGGSVPTSSSSLFTASKADSTVGNFSFKPQSTKLSDAT
KIESTPVVSSTMFGIPPNNTQAIKSLFSTAPISSPFKAQTVSSPNTITPNSSITSKMENK
STEDKSEESDKKMRYYTKLKGLNESVSDWIKQHVEKTPLCILSPIFKDYEKHLKEIQAEY
QGPDSNDATKKHSETNTLIVDSKPEQTTVRSSPFTGASSVFSNSNLKTVSISPFSTQSSP
NSYGEKGMNSVRSPSSPPKTQGFSFGINSSPQSSTLMTNSTASTPFSFGVGKPFSISNFN
APKSTEQEKNEDADDEPPKVEYTPVVEKDSVYEKKCKIFVKKDGNFADRGVGTLYIKKIE
ESGKYQLLVRANTNLGNVMVNLILASAIPTQRMGKNNVMMVCIPTPDAKPPPISILIRVK
TSEEANELLETLNKYKM
NT seq
1674 nt
NT seq
+upstream
nt +downstream
nt
atgtcagcaaagcgtgcggccaccacagagctaaatcatgataattgggaccaagatgat
ccagacgaacatgaagaaatgggcacgttcaaacctgctgctaaagaagctattgagaaa
cgtgtgatcaggacggctaagagacgtaatcaaaatccttctgaaggggtaaaacaaggt
gtttttagtggttttggaggcttcagcaaagcacaaccatcatcatttgactttttggcc
aacttgaccaacggcagcaaacccgtgaatggatcagcttcaagtaaaactgacaccgct
gtttcatccagcggctcgaacagcagcctagcaactagcagtcctagcgggggcctgttc
accctaccagtgtcatcatcttcgagtaaaagtcttttcaatcccacttcacagtcatca
tcattgttcgggggctcagtgcctacttcatcatccagcttatttactgcttcaaaggca
gattcaactgtaggaaatttctctttcaaaccgcaatccaccaaattgagtgacgcaact
aaaattgaatctactccagtagtatcatccaccatgtttggcatcccacccaacaataca
caagctataaagtctttattttcaacagcacccatatcatcaccattcaaggctcagaca
gtgtctagcccaaatacaattacgccaaactccagcattacatcaaaaatggagaacaaa
agtactgaagataaatcagaagagagtgacaaaaaaatgagatactacacaaaactcaaa
ggattgaacgaatctgtatcggattggattaaacagcatgtagagaaaacacctttgtgt
atattgtcaccaatatttaaagattatgagaagcatctgaaagaaatacaagcagaatat
cagggtcctgattctaatgatgcaacaaagaaacattccgagaccaacacacttatcgta
gactctaaaccagaacagactactgtgagatcttcaccatttactggtgctagttctgta
ttctcaaattcaaatctgaagactgtctcaatatccccattttcaacacaaagcagtcct
aattcatatggtgaaaagggaatgaatagtgttaggagtccttcaagccccccaaaaaca
caaggattttcttttggcattaacagctctcctcagagctcaactttgatgacaaactca
actgcctcaactccgttttcatttggggttggaaagccgtttagcatcagtaacttcaat
gcacctaaatctacagaacaagagaaaaatgaggatgccgatgatgaaccacctaaagta
gaatacacgcctgttgtagaaaaagacagtgtctatgagaagaaatgtaaaatatttgta
aaaaaagatggcaactttgctgacaggggtgttggtacactttatattaaaaagattgaa
gaaagtggaaagtatcagttgctggttcgtgctaacactaacttgggcaatgtgatggta
aacctaatcttagcttcggctatacctactcagaggatgggcaagaataatgtcatgatg
gtatgcataccgacacctgatgccaaaccacctccaatttcaatacttataagagtcaaa
acttccgaagaagccaatgaactgttggaaactcttaataaatacaagatgtaa
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