KEGG   Cydia strobilella (spruce-seed moth): 134742082
Entry
134742082         CDS       T10503                                 
Name
(RefSeq) splicing factor 3B subunit 1
  KO
K12828  splicing factor 3B subunit 1
Organism
cstb  Cydia strobilella (spruce-seed moth)
Pathway
cstb03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:cstb00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    134742082
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:cstb03041]
    134742082
   03036 Chromosome and associated proteins [BR:cstb03036]
    134742082
Spliceosome [BR:cstb03041]
 Complex A
  U2 snRNP components
   U2 snRNP specific factors
    134742082
 Complex B
    134742082
 Complex C
   U2 SnRNP specific factors
    134742082
Chromosome and associated proteins [BR:cstb03036]
 Eukaryotic type
  Chromatin remodeling factors
   B-WICH complex
    134742082
SSDB
Motif
Pfam: SF3b1 PPP2R1A-like_HEAT TOR1L1_N HEAT_EZ HEAT_EF3_N HEAT_ECM29 Htt_N-HEAT_1 HEAT_2 XMAP215_CLASP_TOG UTP20_N
Other DBs
NCBI-GeneID: 134742082
NCBI-ProteinID: XP_063531085
LinkDB
Position
6:10560775..10592753
AA seq 1338 aa
MEKIPRTHEAIEAQIKEIQSKKKEIQSENGNNKGVSLGETYYDSDIYDSQGQGGKSRYDG
YVTSIAANDEVEDEDVENVPISQKRPGYTAPASLLNDIAQSDKDYDPFADKRRPTIADRE
DEYRQKRRRMIISPERMDPFAEGGKTPDVGSRTYTEIMKEQYLRAEETELRKKLLERARE
GTLKPVAQSNGEAIKPGAKRKGRWDQSSEDTPSVKKPISATPSSQATPSWDNERGAWEET
PGAAGRGGETPGATPSARVWDATPGHITPGHATPGRETPAQHASRRNRWDETPKTDRETP
GHNSGWAETPRTDRGAGVDTIQETPTPGTKRRSRWDETPGATPAPATPTPSHATPSHATP
SHTPGHATPSTPHTPVFTPGGSTPVGMKAMAMATPTPGHVAAMTPEQLQAYRWEKEIDER
NRPYTDEELDSMFPPGYKVLPPPAGYVPIRTPARKLTATPTPLAGTPIGFFMQTEDVGGS
AAAAARLLDPQPKGSQQLPFMKPEDAQYFDKLLIDVDEETLSPEELKERKIMKLLLKIKN
GTPPMCKAALRQITDKAREFGAGPLFNQILPLLMSPTLEDQERHLLVKVIDRILYKLDDL
VRPYVHKILVVIEPLLIDEDYYARVEGREIISNLAKAAGLATMISTMRPDIDNIDEYVRN
TTARAFAVVASALGIPSLLPFLKAVCRSKKSWQARHTGIKIVQQIAILMGCAILPHLKSL
VEIIEHGLVDEQQKVRTITALASAALAEAATPYGIESFDSVLKPLWKGIRTHRGKGLAAF
LKAIGYLIPLMDAEYANYYTREVMLILIREFQSPDEEMKKIVLKVVKQCCGTDGVEPQYI
MDEILPHFFKHFWNHRMALDRRNYRQLVDTTVEIANKVGASEIINRIVDDLKDDNEQYRK
MVMESIEKILANLGAADIDSKLEEALIDGILYAFQEQTTEDVVMLNGFGTIVNQLGKRVK
PYLPQICGIILWRMNNKSAKVRQQAADLISRIAVVMKTCQEEKLMGHLGVVLYEYLGEEY
PEVLGSILGALKAIVNVIGMTKMTPPIKDLLPRLTPILKNRHEKVQENCIDLVGRIADRG
PEFVSAREWMRICFELLELLKAHKKAIRRATVNTFGYIAKAIGPHDVLATLLNNLKVQER
QNRVCTTVAIAIVAETCSPFTVLPALMNEYRVPELNVQNGVLKSLSFLFEYIGEMGKDYI
YAVCPLLEDALMDRDLVHRQTACAAIKHMALGVYGFGCEDALVHLLNHVWPNIFETSPHL
VQAFMDAVEGMRVALGPIKILQYALQGLFHPARKVRDVYWKIYNTLYIGGQDALVAGYPR
IQNDPNNHFIRYELDYLL
NT seq 4017 nt   +upstreamnt  +downstreamnt
atggagaaaataccgaggacacatgaagcgattgaagctcaaataaaagaaattcaatct
aaaaagaaagaaattcaatctgaaaatggcaacaacaaaggtgtttccctcggtgaaaca
tattacgacagtgatatttatgacagccagggccagggtggcaagtcaagatatgatgga
tatgtaacttccattgcggccaatgatgaagtggaagacgaggatgtggagaatgttccc
atatcccagaaaagaccaggatacaccgcaccagcttcgttattgaacgacatcgcacag
agtgacaaggactatgacccatttgcagataaacgccgcccaaccattgcagacagggaa
gatgagtacaggcaaaaaaggcgtaggatgatcatttctccggagcgtatggatcctttt
gctgaaggaggaaaaactcctgatgttggatccagaacatatactgaaattatgaaagaa
caatatttgcgtgctgaggaaactgagttacgaaaaaagctgcttgaaagggcaagagag
ggaactctcaagccagttgcacaatcaaatggagaagcaattaaacctggggcaaaacgc
aaagggcgttgggatcagagctctgaagatactccctcggtgaagaaacctatatctgct
actccaagctcgcaagctacgccgtcgtgggataatgagagaggcgcatgggaggaaacg
cctggcgctgcaggtcggggcggcgagacgcccggcgccacgccgtccgcccgcgtgtgg
gacgccacgcccggacacatcacgcccggacacgccacgcccggccgcgagaccccggcc
cagcacgcctccaggcgtaatcgctgggatgagacgcccaaaactgacagagaaactccc
gggcacaacagcgggtgggccgagaccccgcgcacggaccggggcgccggcgtggacact
atccaagagactcccaccccgggcaccaagcggcgctcgcgctgggacgagacgcccggc
gccacgcccgcgcctgccacgcccacgcccagccacgccacgcccagccacgccacgccc
agccacacgcccggacacgccacgccatccactccgcacacgcccgtctttacacctgga
ggatcaacgccagtgggaatgaaagccatggccatggccacgccgacgccaggccacgtg
gcggccatgactccggagcagctgcaagcgtaccgctgggagaaagaaatagatgaacgc
aaccgtccctacactgacgaagagctagattccatgttcccaccagggtacaaggttttg
ccgccgcctgccggttatgttccgattcggaccccggctcgtaagctgaccgcaacgcct
acccccttggctggtaccccaatcggctttttcatgcagacggaggatgtgggcgggtcg
gccgcggcggccgcgcgcctgctggacccgcagcctaaggggagccagcaactgcccttc
atgaagccggaggacgctcagtactttgacaaactgctcattgacgtcgacgaggaaacg
ctctcgcccgaggaactcaaagaaaggaagatcatgaaactcttactcaaaatcaagaac
ggcaccccgcctatgtgcaaggcggcgctgcgccagatcacagacaaggcgcgcgagttc
ggcgccgggccgctgttcaaccagatcctgccgctcctcatgagccccacgctcgaggac
caggagcgccatctgctggtcaaagttattgacaggattctgtacaaacttgacgacttg
gtgcgcccgtatgtgcacaagattttggtcgtgattgaacctcttctcatcgatgaagat
tactacgcgcgcgtggaaggtcgtgagattatctctaacttggccaaggccgccggtcta
gccaccatgatttccaccatgagacctgatatcgacaacatcgatgaatacgtgagaaac
actacagccagggcgttcgccgtcgttgcttcagctttgggtataccttctctactgccc
ttcttgaaggctgtgtgccgatcaaagaagtcgtggcaggcgcgccacactggtataaag
atcgtgcaacagatcgccattctgatggggtgtgccatattaccgcatcttaaatcactc
gtcgaaattattgaacatggtttggtcgacgagcaacaaaaagtccgtactatcactgcg
ttggcgagcgccgccttggccgaggcagccacgccgtacggtatcgagtccttcgactcg
gtcctcaagcccctgtggaagggtatccgcacccaccgaggcaaaggtctggctgccttc
ctcaaggccatcggttacctgatccccttaatggacgccgaatacgccaactattacacg
cgtgaagtgatgttgattctcattcgtgagttccagtcgcccgatgaggaaatgaagaag
attgtactaaaggtagtgaaacagtgttgcggcaccgacggtgtagaaccacaatacatt
atggacgaaatcttaccacacttcttcaagcacttctggaaccatcgtatggctctcgac
aggcgtaactatcgacagcttgttgacactacggttgaaattgctaataaggtgggcgct
tcagaaatcattaacagaatagtagacgatctcaaagacgacaacgagcagtaccgcaag
atggtgatggagtcgatcgagaagatcctcgccaacctgggcgccgccgacatcgactcc
aagctcgaggaggctcttattgacggcatcctgtatgccttccaagaacagactacagaa
gatgtggtaatgctgaacgggttcggcacaatagtaaaccagctcggcaagcgcgtgaag
ccgtacttaccccaaatatgcggtatcatcctgtggcgcatgaacaacaagtcggccaag
gtgcgccagcaggccgccgacctcatctcgcgcatcgccgtcgtcatgaagacgtgtcag
gaggaaaaattgatgggtcatcttggagttgtcctctacgaatatttgggtgaagagtac
ccggaagtgctgggttccatcctgggggcgctgaaggcgatcgtgaacgtcatcggcatg
accaaaatgacgccgcccatcaaggatctactaccgagattgacgcccatcttgaagaac
aggcacgaaaaagtacaagagaattgcattgatctagtcggacgtatcgcagacagaggt
ccagagtttgtctcggccagagagtggatgagaatatgtttcgagctgttggagcttctc
aaggcccacaagaaagccatcaggagagccactgttaacaccttcggttacattgccaaa
gctattggacctcacgacgtgctggcgaccttgttgaacaacttgaaagttcaggagcga
caaaacagagtgtgcacaacagtcgccattgcgattgtcgccgagacgtgctcaccgttc
acagtattgccggctctcatgaacgagtaccgggtgccggagctgaacgtccagaacggc
gtgctgaagtccttgtccttcttgttcgagtacatcggcgaaatgggcaaggattatatt
tacgccgtgtgcccgttgctcgaagatgctcttatggatagagatctagtgcacagacaa
acggcgtgcgcggcgataaagcacatggcgctcggcgtgtacgggttcgggtgcgaggac
gcgctggtgcacctgctcaaccacgtgtggcccaacatcttcgagacgtcgccacatcta
gtgcaggccttcatggacgccgtcgagggcatgcgcgtcgcgctagggcccatcaagata
ctgcagtacgcgttacaaggtttatttcatccagccagaaaagtccgcgacgtttactgg
aagatctacaacacgctgtacatcggcggccaggacgcgctcgtggccgggtacccgcgg
atacaaaacgatccaaacaatcactttatacgatatgaattagattacttgctgtaa

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