Cydia strobilella (spruce-seed moth): 134742127
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Entry
134742127 CDS
T10503
Name
(RefSeq) nipped-B protein
KO
K06672
cohesin loading factor subunit SCC2
Organism
cstb Cydia strobilella (spruce-seed moth)
Brite
KEGG Orthology (KO) [BR:
cstb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
cstb03036
]
134742127
Chromosome and associated proteins [BR:
cstb03036
]
Eukaryotic type
Sister chromatid cohesion proteins
Adherin complex
134742127
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nipped-B_C
Cohesin_HEAT
PDS5
SelK_SelG
Motif
Other DBs
NCBI-GeneID:
134742127
NCBI-ProteinID:
XP_063531159
LinkDB
All DBs
Position
6:complement(10672380..10708287)
Genome browser
AA seq
1966 aa
AA seq
DB search
MNERDIPSVPITTLAGVASLTDLLPVLPLPTPLPSTLNNKSQLFHPRVAEEAAILLATRD
DNLVTLLLQSLMKTSVEHIDLKEESIPNAVSPAPQQATPELLKAILHVNPNVFDQQQRNH
WGNHVTSKFNGLSPSASYNYASHNTAHSSPSSVGTAVHLAAIPNQQLLAPPCQSSPHVNM
GSPPSQARPGSQVNITAQNNISPLWNSANSSTYTSPMSNTSSSNPQNGGFYGSLTQENPS
FGTNLSEDKDPLAMSPVNLPDQQRLMMQSQEKPFEQDGNVVTGQSPAQASVAPSPLRQEP
QVPQPSMGAPYAPQSLPHNPNQDKQDSKNNTVINNRYPVVKLGRLPEGLLKRHETPVDER
SRKNSTMESDSDDNAPLKPKSSNVTPPVDKEREAIDLAREKNWEAVKRKHEEASRKEECE
TAIVRPKLRKVERRLVPVLEMLSVDELMETNTYQRFNKLIETVFETIEDDIIVTDEMEGT
DIPEELLLPRYQLQELCTEAAKLKNLGAMEAIPSDRLVRLLSILEKNIRAAEKMSLAGDP
EDSEEMRQIWLESALERVMCASDSCLTALYIMTSPSMPKRIFLEDVIDRIIMFIKFQLNN
TIYCVYDPVYSIQTTSKKKVDGRKRRGGGGGGGGGGNASRRSGGASKAVRELYTHAHECV
TLLAELLAAHHLTDTTVLHASTVGVSPFFVENVSELQLSALKLVTTIFTKYEQHRRLLLE
DILASIARIPSSKHNLRSFQLSSDQHIQMLTALVLQLVQCVVTLPETLCKTQDKDKELSE
TTKKTVDKDLLIISKYEAAISVGGTFLTSFLNKCRSRSEEVDFRPLFENFVHDLLTTVNK
PEWPATELLLSLLGTMLVKYMSDKSMEMSVRVASLEYLGLVAARLRRDSVTSRAKLATMD
AVVRDIKAEEEKDGNQGMNATAGLDEDEERTEFLQRVLLDYLAVNGQKDQAWNCARHFYI
TQWYRDMVVQPKSSSPTKKPKHKSKKRHKSDTSDEDSDDDDDSDAETKSERKVNTSAIVS
AEKFKTIQRRKTFFLEKIRPFRYQGGTQVQVMQSYIDYGGAELISQYLASKRSFSQSFDR
YLRKILVILCENTIAIRTKAMKCLANIVEADPGVLARQDMQIGVNRSFLDQSTAVREAAV
DLVGKFVLSRPELIDKYYGMLSNRILDTGVSVRKRVIKILKDICTECPEFPKIPEICVKM
IRRVNDEEGIRKLVMEVFQNMWFSPCPASRTAALDAADPLTRKVLNITDVVISSRDMGLE
WFQQLLMSLFKPKEDKDDSTKIIYQPPKSLLVACQQIVDCLIESLLQLEETSAEGSGSSQ
RILACLSTLHLFAKIRPQLLVNHALTLQPYLSLKCQNQYEQQITSTVASTLELVVPLMEH
PSEVFLAQLEEDAVKLILQRGQLVIAACIALLAAIVNNLTRNYKLIRDVFNKYHGILLQW
KSSWQRNPDITRTLHARPQFRRSLFIVGLLLRYFDFTDPKVIDGLAIDIKEQLFTTLMFF
VGLEDEDFVSHTLKALGSVCVRHYEFMLRPELKEFYHQLLTSDLAPIEMKADVLRNVEMY
LQEEEQRMIRQDKEWSTRSKLENLKEMGDVSSGMASTVIQLYLKEILGAFLHPSTLVRSS
AMKVVQLVLAQGLVHPVQIVPYLICMSTDLEVTVSHTADKNLQEIDKKYPGFIHMKAQLG
IKLSYQLQKIIQTSVKNDVIRGFRKKDQDELPSSLNGFLYSLLRNTRPQRRALVLSLLKQ
FDDVSTAPLDQILYLADNLSYFPFQVQDEPLFIIHHIDIIISTSGSNLLQVFREGLVSTS
SEVKEEEEEEEEEEAEALVARLPECTRPLADAMRQARGCLLLLMLKQHLKQLYGFTDAKI
NQYSPSESVKVYEKAISRRQAPVFEPRATIAQLHDEPQDDELDERGRRRLVDDYLEFKQL
MLKFDPEEEEDEELTAGGAGLGAATTTAAGAAPTAPPAPPAPPPAT
NT seq
5901 nt
NT seq
+upstream
nt +downstream
nt
atgaatgagagggatattccaagtgtccctattacaactttggcaggagtagccagtttg
acggatttattaccagttctgccacttcccacacctttaccatcaaccctcaacaataag
tctcagttgtttcatccacgagtagcagaggaagctgcaatattacttgctacccgagat
gacaatttggttacccttcttttgcagtcccttatgaaaacctctgtggagcatatagat
cttaaggaggaaagcatacccaatgcagtaagccctgctcctcaacaagctacaccagaa
ctactcaaagcaatattacatgtaaatcccaacgtatttgaccaacaacagagaaaccat
tggggcaatcatgtcacctcaaagtttaatggattgtcaccttctgcctcatacaattac
gcatcacacaatactgctcactcaagtccgtcttcagttgggacagcagttcacttggca
gccattccaaaccagcaactgctagccccaccatgccagtcctcaccacacgtcaacatg
ggctctccaccatcacaagccaggcctggaagccaagtaaacatcactgcgcagaacaat
atttctcctttatggaatagtgctaattcttccacatatacaagtcccatgtccaacact
tctagttctaacccccaaaatggtggtttctatggaagtttgacccaagagaatccaagt
tttggtactaatttatccgaagataaagatcctcttgctatgtcacctgtcaatttgcct
gaccagcagagattaatgatgcaatctcaggaaaagccctttgaacaagatggaaatgtg
gtaacgggccagtcgcccgctcaagcaagtgtggcgccgtcaccgctgcgccaggaaccc
caagtgcctcagccgtcgatgggcgcgccgtacgctccgcagtcgttaccacataatccc
aatcaagataaacaggactctaaaaataatactgtcataaataatagatatcctgttgtc
aaactcggcagattacctgaagggttgttgaaaaggcatgagacgccagttgacgagagg
tcaagaaaaaatagtacaatggaatctgattcagatgacaacgctcccttgaagccaaag
tcatcaaatgttactccacccgtagacaaagaaagagaagcaatagatttagctagggag
aaaaattgggaagctgtcaaaaggaaacatgaagaagcaagcagaaaagaggaatgcgaa
acggctatagttcggcccaagctgcggaaagttgaacgaagattagtacctgtgttggag
atgttatcagtagacgaacttatggagactaacacttaccaacgtttcaacaagctcatt
gaaacagtttttgaaactattgaagacgacatcattgtgactgatgaaatggaaggaaca
gacattcctgaagagttgttgttgccgcggtaccagctccaggagctgtgtaccgaagcg
gcaaagctgaagaacctgggtgctatggaagccattccttccgatcggctcgtgcggtta
ttgtctatactggagaaaaatatacgcgccgcagaaaagatgtcattagctggcgatcct
gaggatagtgaagaaatgcgtcagatatggctggagtccgccctggagcgagtgatgtgc
gcgtccgactcgtgcctcacggcgctctacatcatgacgtcgcccagcatgcccaaacgc
atattcctcgaggacgtcatcgaccggatcattatgttcatcaaattccagttgaataac
actatttactgcgtctatgatccggtctacagcattcagactacttccaagaagaaagtt
gacggtcgcaagcggcgcggcggcggcggcggcggcggcggcggtggcaacgcgtcgcgg
cgctcgggcggcgccagcaaggccgtgcgcgagctgtacacgcacgcgcacgagtgcgtc
acgctgctggccgagctgctggccgcgcaccacctcaccgacaccaccgtgctgcacgcc
tccaccgtcggcgtgtcgcccttcttcgtcgagaacgtcagcgagctgcagctctccgcg
ctcaagctcgtcaccacgattttcacaaaatacgaacaacatcgaaggctgttactagag
gatatcctggcatcaatagcgcgcatccccagctccaagcacaacctgcgctcgttccag
ctgagctccgaccagcacatccagatgctgacggcgctggtgctgcagctggtccagtgc
gtcgtcacgctgcccgagaccttatgtaaaactcaggataaggacaaagagctttcggaa
actaccaaaaagaccgtggacaaagatctgttgataatatccaagtacgaggcagcgatc
agcgtgggcggcacgttcttgacgtcgttcctgaacaagtgccgcagccgcagcgaggag
gtggacttccggcccctgttcgagaacttcgtgcacgacctgctcaccaccgtcaacaag
cccgagtggcccgccactgagctgctgcttagtttacttggaacgatgcttgtaaaatac
atgtcggacaagtcgatggagatgtcggtgcgcgtggcgtcgctggagtatctggggctg
gtggcggcgcggctgcggcgcgacagcgtgacgtcacgcgccaagctcgccaccatggac
gccgtcgtgcgcgacatcaaggccgaggaggagaaggacggcaaccagggcatgaacgcc
accgcgggactggacgaagacgaagagaggacggagttcttacagcgcgtcctcctcgac
tacctcgcggtcaacggccagaaagaccaggcgtggaactgtgcgcggcacttctacatc
acgcagtggtacagggacatggtcgtgcagcccaaaagctcctcgcccaccaagaaacct
aagcacaaatcgaagaaacggcacaaaagcgacaccagcgacgaggactccgacgacgac
gacgacagcgacgccgaaacgaaatccgaacggaaagtcaacaccagcgccatagtttcg
gcggagaaattcaagacgatacagcggcggaaaacattttttctcgaaaaaatcaggccg
ttcagataccaaggcggcactcaagtacaagtgatgcaatcctacatcgactacggcgga
gcggaattgatctcgcaatacttagcatcgaagcggtcgttctcgcagagcttcgaccgg
tatttacgaaagatactggtgattctctgcgagaacacgatcgccatccgaacgaaggcg
atgaagtgcctcgcgaacatcgtggaggcggacccgggcgtgctggcgcggcaggacatg
cagatcggcgtcaaccgctccttcctcgaccagtccacggccgtgcgcgaggccgccgtc
gacctcgtcggcaagttcgtgctcagccggcccgagctcatcgacaagtattatgggatg
ctctccaatagaatcttagatacgggtgtgtccgtcaggaaacgtgtgataaaaatttta
aaagacatctgcaccgaatgcccagaattccccaagatcccagagatctgcgtaaagatg
atccggcgggtgaacgacgaggagggcatccgcaagctggtgatggaggtgttccagaac
atgtggttcagcccttgcccggcgtcgcgcacggcggcgctggacgcggcggacccgctc
acgcgcaaggtgctcaacatcaccgacgtcgtcatctcctccagggacatgggcctcgag
tggttccagcagctgttgatgagcttatttaaaccgaaggaggataaagatgactccacg
aaaattatataccaaccgcctaaatcgcttttagtagcctgccaacagattgttgactgc
cttattgagagtttactacaattagaagaaacgagtgctgaagggagtggatcatctcaa
cggatactcgcgtgtctctccactctgcatttattcgctaaaattaggccacagttatta
gttaatcacgccttgactctacaaccgtacctgagtttaaaatgccagaaccaatacgag
caacagataacgtcgacggtagcgtcgacgctggagctggtggtgcctctgatggagcac
ccgagcgaggtgttcctggcgcagctggaggaggacgccgtgaagctgatcctgcagcgc
gggcagctcgtcatcgccgcctgcatcgcgctgctcgccgccatcgtcaacaacctcacg
cgcaactacaagctcatccgggacgtgttcaacaagtaccacggaatacttctacaatgg
aagtcgagttggcagaggaaccctgacataacgcgcaccctgcacgctaggcctcagttc
cggaggtcgctcttcatcgtgggcctcctgttgcgatatttcgacttcacggaccccaaa
gtcattgatggccttgcaattgacatcaaagaacaattgttcacaacgttgatgttcttt
gtgggattggaggatgaggattttgtgtcacacacacttaaagcgctgggttccgtctgc
gtcaggcattacgaatttatgctaaggccggaactgaaagagttttaccaccagctgcta
acttctgacctcgcgcctatagaaatgaaagcagacgtgctcaggaatgtcgaaatgtat
ttacaagaggaagaacaaagaatgatcagacaggacaaagaatggtcgacgcgatcgaag
ctagagaacctgaaggagatgggcgacgtgtcgtcgggcatggcgtcgacggtgatccag
ctgtacctgaaggagatcctcggcgccttcctgcaccccagcacgctggtgcgctccagc
gccatgaaggttgtccagctcgtgctggcgcaggggctagtgcaccccgtgcagattgtt
ccatatttgatctgcatgagtactgatttagaagtgacagtatctcacacagcggacaaa
aacctacaagaaatagataagaaataccctggattcatccatatgaaggcgcaacttggc
atcaagctttcttatcagttacaaaaaataattcagaccagcgtcaagaatgatgtcatt
cgaggttttaggaaaaaagaccaagacgaactaccttcgtctctaaatggatttttatat
tcattactacgtaatacacgaccgcaaaggagagcgctggttttatcgttacttaagcaa
tttgacgatgtttccactgcgcctttggatcaaatattgtacctggcagataatttgagt
tacttcccgtttcaagtacaagatgaaccactttttataattcatcacatcgacatcatc
atatctacatccggatcaaacttactacaagtttttcgtgagggcctggtgagcacgagc
tcggaggtgaaggaggaggaggaagaggaggaggaggaggaggcggaggcgctggtggcg
cggctgccggagtgcacgcggccgctggccgacgcgatgcgccaggcgcgcggctgtcta
ctgctgctcatgctcaagcagcacctcaagcagctctacgggttcaccgacgccaaaatc
aaccagtactcgccgtcggaaagcgtgaaggtgtacgagaaggcgatatcgcggcggcag
gcgccggtgtttgagccgcgcgccaccatcgcgcagctgcacgacgagccgcaggacgac
gagctcgacgagcgcggccgtcgacggctggtcgacgactacctcgagttcaagcagctg
atgctgaaattcgaccccgaggaggaggaggacgaggagttgacggcgggcggcgcgggc
ttgggcgcggcgacaacgacggcggcgggcgccgcgccgaccgcgccccccgcgccgccc
gccccgccgcccgccacctag
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