Cydia strobilella (spruce-seed moth): 134743627
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Entry
134743627 CDS
T10503
Name
(RefSeq) nuclear factor NF-kappa-B p110 subunit isoform X1
KO
K02580
nuclear factor NF-kappa-B p105 subunit
Organism
cstb Cydia strobilella (spruce-seed moth)
Pathway
cstb04620
Toll-like receptor signaling pathway
cstb04624
Toll and Imd signaling pathway
Brite
KEGG Orthology (KO) [BR:
cstb00001
]
09150 Organismal Systems
09151 Immune system
04620 Toll-like receptor signaling pathway
134743627
04624 Toll and Imd signaling pathway
134743627
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cstb03000
]
134743627
Transcription factors [BR:
cstb03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
RHR (Rel homology region) Rel/Ankyrin
134743627
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
RHD_dimer
RHD_DNA_bind
Ank_2
Ank_5
Ank
Ank_4
Motif
Other DBs
NCBI-GeneID:
134743627
NCBI-ProteinID:
XP_063533267
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Position
8:11162288..11215649
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AA seq
799 aa
AA seq
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MSTSEHDTMSEAASSPLSYMGSPHRSPCQQVPQLANVFTELTCAEINGYNGMKDRPFLRI
VEQPQDHFRFRYRSEMVGTHGCLLGKTSTTSKVKTHPMVELVNWNKQALIRCRLAQHLKP
DEHPHQLLEDEQEDKDVSAEVPERGSYRVGFAGMGIIHTAKKDVPTLLFKKYKERQGKLI
DNRELMSFCETEARGINLNIVRLRFSAHDIDTDREICAPVFSEPIHNMKSAATNDLKICR
ISKFYGRPKGGEDVYILVEKVNKKNIEIRFVERNENNEEIWSAKAHFLQSDVHHQYAIVF
RTPAYKDPEITSDVKVSVELVRPSDGRCSDPKEFTYKADPFTKNKKRKANTQSPYSSFSS
SGSLGSIKSLGLPATVMEFDQQPQKTTPENDFMMNLMMPNAVPVIMETTTSANLGDALMG
MACDQEKIENPLQLHCTVSPMMPQADPPAISLNSTEFANLLRADLEPDQRDDFTALCQLY
MTPSMTDFMQDGLEADSGRGKRILQRKTKVQQQGARSQVKTHNTTDKPSEYTAVYSPEHG
SEVKKLVKEICDHIRNKSTFNKQVVKEKLERLFARRLSNGDTFLHMSLCNNRGSFEYIVK
LLHSMKMHHLLNRANDLEQTILHLAIVNDLSQLVTIIIANGVDPMLGDQDGNNAVHYAAQ
CGVCMQPLLDAIKKNKVPCDLNAVNKEKQTALHLAVVPGTEPSDIEAAKHSITLLLQHGA
SHNARDAEGRTPLHLTAYDDRLALARVLLDHMPEVAYVILLYIAAHKITPTSRGQPQRAR
RGGPHAAPPHRLRRPLGSR
NT seq
2400 nt
NT seq
+upstream
nt +downstream
nt
atgtcaacaagtgaacacgatactatgagtgaagcggcgtcttcgccgctgtcgtacatg
gggtccccgcatcggtcgccgtgccagcaggtgccgcagttggctaatgtcttcacagaa
cttacgtgtgctgaaatcaatggttacaatgggatgaaagacaggccgttcctgcgcata
gtggagcagccgcaggaccacttccggttccggtacaggagtgagatggtcggcacgcac
gggtgtctgctcggcaaaactagcaccaccagtaaagtcaagacgcatcctatggtcgag
ttggtgaattggaacaaacaagcactgatccgctgcagactcgcgcagcacctcaagccc
gacgagcatccgcaccagctgctcgaggacgagcaggaagacaaagacgtcagcgcggag
gtgccggagcgcggcagctatcgggtcggttttgctggcatgggtatcatacacacggct
aagaaagatgtgcctactctcctgttcaagaaatacaaggagaggcaaggaaaacttatc
gacaacagagaactcatgagcttctgcgagacggaggctcgaggtatcaacctaaacatc
gtgaggctgaggtttagcgcgcacgatatcgacaccgaccgggagatctgcgctccggta
ttctccgagcctatacataacatgaaaagcgcagcaacaaatgacctgaagatatgccgt
ataagcaagttctacggccgtcccaaaggcggcgaggacgtttacattctagtggagaaa
gtcaacaagaaaaacatagagatccgctttgtggaacgaaacgaaaataatgaagagatt
tggtcggccaaagcgcactttctgcagagcgacgttcaccatcaatacgctatcgtattc
aggacaccagcgtacaaggacccggagataacgtccgacgtgaaagtgtccgtagagcta
gtgaggccttccgacggccgctgcagcgaccccaaggagttcacgtataaagcagacccg
tttacgaagaacaagaagcggaaagctaacacgcagtcgccgtatagctctttcagcagc
tctggctctttaggatcaataaaaagtcttggtttaccggccaccgttatggagttcgat
caacaacctcaaaagacaactccagaaaacgatttcatgatgaatctgatgatgcctaat
gccgttccggtaataatggaaacgacaactagcgctaacttgggcgacgcactaatgggg
atggcgtgtgaccaagaaaaaatcgaaaatccgttgcaactgcactgcaccgtcagccct
atgatgccgcaggcagacccgcctgcaattagtttaaattctacggagtttgcaaacctt
ctacgagctgatttagaaccagatcagagagatgattttaccgcactctgccagctgtac
atgactccatcaatgaccgattttatgcaagacggcttggaagcggattcaggacgcgga
aagcgtatactccaacgcaaaacgaaagtacagcaacagggcgcccgttcgcaagtgaag
acccacaatacaacggacaagccgagcgaatataccgccgtctactcgcccgaacacgga
tcggaggttaagaaattagtaaaggagatctgcgatcacatacgaaacaagtctactttc
aacaagcaagtggtgaaagaaaaacttgagagactgtttgcgaggcgcctttccaacgga
gacacattccttcacatgagcttatgcaacaatagaggcagtttcgaatacatagtgaaa
ttactgcactctatgaaaatgcaccatctcctaaatcgcgccaatgatctcgagcagacg
attctacacttggctatcgtcaacgacctttctcagttggtgaccatcatcatagccaac
ggtgtggacccaatgctgggcgaccaggacggcaataacgcagtgcattacgccgcgcag
tgcggcgtctgcatgcagcctttactcgacgccatcaagaagaacaaagtgccgtgcgac
ctcaacgccgtcaacaaagaaaaacaaacggcccttcacttagccgtagtcccgggcacc
gagccatccgacatcgaggcagccaagcactccataacactactcctgcaacacggggcc
agccacaacgcgcgagacgcggagggccgcacgccgctccacctcaccgcttacgacgac
cgcttggctctcgctagggtgctcttggaccacatgcccgaggtagcatacgtgatacta
ctgtatatagcagcccataagattactcctacatcacggggccagccacaacgcgcgaga
cgcggagggccgcacgccgctccacctcaccgcttacgacgaccgcttggctctcgctag
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