Cydia strobilella (spruce-seed moth): 134743791
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Entry
134743791 CDS
T10503
Name
(RefSeq) ATP-dependent RNA helicase me31b
KO
K12614
ATP-dependent RNA helicase DDX6/DHH1 [EC:
5.6.2.7
]
Organism
cstb Cydia strobilella (spruce-seed moth)
Pathway
cstb03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
cstb00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
134743791
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cstb03019
]
134743791
03036 Chromosome and associated proteins [BR:
cstb03036
]
134743791
Enzymes [BR:
cstb01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
134743791
Messenger RNA biogenesis [BR:
cstb03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Common to processing body (P body) and stress granule
134743791
mRNA degradation factors
5'-3' decay
Decapping complex
134743791
Chromosome and associated proteins [BR:
cstb03036
]
Eukaryotic type
Gene silencing
piRNA pathway
134743791
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
CMS1
Motif
Other DBs
NCBI-GeneID:
134743791
NCBI-ProteinID:
XP_063533524
LinkDB
All DBs
Position
1:complement(28600444..28613503)
Genome browser
AA seq
442 aa
AA seq
DB search
MMTENRISSSNHVGNSMSNQNKGDVDKTVDDIGWKSKLKIPPKDRRIRTSDVTDTRGNEF
EEFCLKRELLMGIFEKGWEKPSPIQEASIPIALSGKDVLARAKNGTGKTGAYCIPVLEQV
DPKKDAIQALIVVPTRELALQTSQICIELAKHTDIRVMVTTGGTNLRDDIMRIYQNVQVI
IATPGRMIDLMDKQVAKMDQCRMLVLDEADKLLSQDFKGMLDMVISRLPKERQILLFSAT
FPLSVKQFMEKHLREPYEINLMEELTLKGVTQYYAFVQERQKVHCLNTLFSKLQINQSII
FCNSTQRVELLAKKITELGYCCYYIHARMAQAHRNRVFHDFRAGLCRNLVCSDLFTRGID
VQAVNVVINFDFPRMAETYLHRIGRSGRFGHLGIAINLITYEDRFALHRIEQELGTEIKP
IPKVIDPALYVARPSEEDDADK
NT seq
1329 nt
NT seq
+upstream
nt +downstream
nt
atgatgaccgaaaatagaattagttcaagtaatcacgtcggtaacagcatgagcaatcag
aataagggagatgtcgataaaactgtcgacgacatcggttggaaatcaaaattaaaaata
cccccaaaagatagaagaataagaactagtgatgtcactgatactagaggtaatgagttt
gaagagttctgcttaaaacgagagctgctgatgggcatttttgagaagggatgggaaaaa
ccatcccccattcaagaggcttcaatccccattgcacttagtggtaaagatgtgcttgct
cgagccaaaaatggtacaggcaagactggagcttattgtattccagttttagaacaggtt
gatcctaaaaaagacgctattcaagctttaattgtggtaccaactagagagttagcactt
cagacatcacaaatttgcattgaactggcaaaacacacagacatacgcgtgatggtcacc
acaggaggcaccaacctcagagatgatattatgcgtatttatcaaaatgtgcaagtgatt
attgccacgccaggccgaatgattgatctcatggacaagcaggttgctaagatggaccag
tgccggatgctggtccttgatgaagctgacaaacttctttctcaggacttcaagggcatg
cttgatatggttatttcacgattacccaaagagcgccaaatcctgctgttctctgccaca
ttcccattgagtgtgaagcagtttatggagaagcacttgagggagccctacgaaattaac
ctcatggaagagctcacgctgaagggagtcacacaatattatgcatttgtacaagagagg
cagaaggtgcattgtttaaataccctattttcaaagttacaaataaaccagtccatcatt
ttctgcaattcaactcagcgcgtggagctgctggccaagaagatcacggagctggggtac
tgctgctactacatccacgcgcgcatggcgcaggcgcaccgcaaccgcgtgttccacgac
ttccgcgccggcctgtgccgcaacttggtctgctccgacctgttcactcgcggtatcgac
gtgcaggccgtcaacgtcgtcatcaactttgacttcccgcgcatggccgagacttacctg
caccgcatcggtcgctcgggccgcttcggccacctcggtatcgccatcaacctcatcacg
tacgaggaccgcttcgctctgcaccgcatcgagcaggagctgggcacggagatcaagccg
atcccgaaggtcatcgacccggcgctgtacgtggcgcgtcccagcgaggaagatgacgcg
gacaagtaa
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