| Entry |
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| Name |
(RefSeq) poly(A)-specific ribonuclease PARN-like
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| KO |
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| Organism |
cstb Cydia strobilella (spruce-seed moth)
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| Pathway |
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| Brite |
KEGG Orthology (KO) [BR:cstb00001]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
134744133
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:cstb03019]
134744133
Enzymes [BR:cstb01000]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.4 poly(A)-specific ribonuclease
134744133
Messenger RNA biogenesis [BR:cstb03019]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Other 3'-5' decay factors
134744133
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| SSDB |
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| Motif |
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| Other DBs |
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| LinkDB |
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| Position |
9:complement(6148738..6196096)
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| AA seq |
641 aa
MEVTRKNLKESLPLVSESIKRADFLVIDAEFTGLIHGPDVTMFDSPGEYYLRTMAGCKDF
LLIQFGLCAFYWDEDAKQYMNDAYNFYLFPRGRPGPERMFLCQSSSLDFLSAQGFDFNKL
IRDGIPYMTEPTETRLREMLTERQKLYANENNIIPVPDENKQQIEDICKKVRQFLDEQKS
EEMEIDRCNAFIRRLCFQELGSRFKGEAYVETKVLENKNRVLKVTRVTPENAAQDREAMK
KDKEWEEFEEAVGFSKVARMISQSEKLVVGHNMLLDVLHTLNHFFQPLPPDYQTFKEFAH
CMFPSLLDTKYMSSLPPFKDKVNSSVLQHLLATLSEPPFGLPTVGSSSGRGYTLSDDKPH
EAGYDAFVTGLCFLAMRSHVSRMRGESERSEPSAALLRPFLNKLFLTKTAYQDSPYMNID
GPDPTPSRDHVFHLTYPMEWQRNEINQLFSPFGPIVVQFIDDTSAFVALSRREQARDVMR
TLAKHSRTTLVPYAKFKHVAIQDSRHWRKEEYTTPDTPRPRQAVSTTSVSPAPPKSPVKD
LKEPTKERQRSNSLTSPPPSRKRTSSGMFQVDETEPPPKKPEPSRKRPEVNGKKDSSEPK
KGKQEKDNAKAKKQQKKVIERFDEEAKTECVSAFKESDSWD |
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| NT seq |
1926 nt +upstreamnt +downstreamnt
atggaagtcactcgcaaaaatttgaaggagtccttgcctcttgtgagtgagtctataaag
agagcggactttctagtgatagacgcggagtttacggggttaatacatgggcccgacgtt
actatgtttgattctccgggggagtattacttacggactatggcgggttgtaaggatttt
ttgttaatccagttcgggctgtgtgcgttctactgggacgaggatgcgaagcagtacatg
aacgacgcgtataatttttatctgttcccgcgcggacggcccggcccagagcggatgttt
ctctgtcaaagctccagtttggattttctgtcagctcaggggtttgatttcaacaagcta
atacgagacggcatcccatacatgacggagccaaccgagacccgtctaagagaaatgctc
acggagagacagaaattgtatgccaatgagaataacatcatcccggtgccggacgagaat
aaacagcagattgaagatatttgtaaaaaagtgcgtcagttcctggacgagcagaaatct
gaagagatggagatcgaccgctgtaacgcgttcatcaggcggctgtgtttccaggaactt
ggctcgcgtttcaagggggaggcgtacgtggaaaccaaagtactggagaacaagaacaga
gtactgaaagtgacacgggtaacgccggagaacgcggctcaagatcgagaagccatgaag
aaggacaaggaatgggaggagtttgaagaggcagtcggtttctctaaagtggcgcggatg
atcagtcagtcggagaagctggtggtcggacataacatgttgttagatgtgcttcacacg
ctcaaccatttcttccaaccgttgccaccagactaccagaccttcaaagaatttgcacac
tgcatgtttcctagcctactggacacaaaatacatgtccagtttgccacccttcaaggac
aaggtgaattccagcgtgctgcagcatttactggccaccctatcagaaccgcctttcggc
ctgcctacagtcggatcgtcatcaggccgcggctacaccctctcagatgacaagccacac
gaagccggctacgacgccttcgtgaccggcctgtgcttcctagcgatgcggtcgcacgtg
tctcgcatgcgcggagagagcgagaggtccgagcctagcgcggcgctgctcaggccgttt
cttaataagctattccttacgaagactgcgtatcaggattcgccgtatatgaatattgat
ggaccggatcctaccccgtccagagaccacgtgttccatctcacgtaccccatggagtgg
cagaggaatgaaatcaatcagttgttcagtcctttcggtcccatagtggtacagttcatc
gacgacacgtctgcgttcgtggcgctctcgcgacgggagcaagcgagggacgtgatgcga
acgctcgcgaaacattcacggaccacactcgtgccgtacgccaagttcaaacacgtggct
attcaagatagcagacactggcgcaaggaggagtacacaactcctgacacccccaggcca
cggcaagccgttagtacaacaagcgtctctcctgctcctccaaagtctcccgtcaaggac
cttaaagaacccaccaaagagcgccagcgcagcaatagcctgacgtcaccaccgcccagc
aggaagaggaccagctccggtatgttccaggttgacgaaacggagccgccgccaaagaag
cccgagccctcccgaaagaggcccgaagtcaacggcaagaaggactccagtgaacctaag
aaggggaagcaagaaaaggacaacgcaaaggcgaagaagcagcaaaagaaagtgatagaa
cgattcgatgaagaggctaagacggaatgcgtgtctgctttcaaagagagcgatagttgg
gattaa |
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