Cydia strobilella (spruce-seed moth): 134744168
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Entry
134744168 CDS
T10503
Name
(RefSeq) E3 ubiquitin-protein ligase RBBP6 isoform X1
KO
K10624
E3 ubiquitin-protein ligase RBBP6 [EC:
2.3.2.27
]
Organism
cstb Cydia strobilella (spruce-seed moth)
Brite
Enzymes [BR:
cstb01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
134744168
Ubiquitin system [BR:
cstb04121
]
Ubiquitin ligases (E3)
U-box type E3
134744168
BRITE hierarchy
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Ortholog
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GFIT
Other DBs
NCBI-GeneID:
134744168
NCBI-ProteinID:
XP_063533946
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Position
9:complement(7063352..7122555)
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AA seq
1699 aa
AA seq
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MSVHYKFKSALDYDTVTFDGLHISVGDLKAAISQQKRIGKTSDFDLQITNAQTKEVYSDD
GTLIPKNTSLLVARVPLSQQPKKQWEGSNNNAALHKDVSVNKGLADLSRMEGSEQDKINA
MISQSTFDYDPSNYQKIRGQNQRGVVPSNYVCYKCQKHGHWIKDCPIANSTDPIEIRRST
GIPRSFMVPVEGPKAPGAMMTPSGTFAVPAVDHEAYLASESAGGAEVAANAPAAPEPAIP
DELICSLCRDLLTDAVMIPCCGNSFCDECIRGALLESEDHECPDCREKEIAPTTLIPNRF
LRNSVSAFRNQTGYSRRAPHRPAQAPPPVLHNLEQPPPGVPMQLPPNGPPPPMANNDVGG
HSSDGSSDNITVLVPPRYTHRRTRRPDDAPRPRKRHGPPVLKPPGMDEPPNMPMNVPRVD
EQRASTPTIDEGRDPMASQGSFNRGAPPPFVPGVPPPRHRFNDPGYSRGRGRRGPPGPGP
GRPPYERFPPEPYQPPPPGIKDEPNGHGEDPLEAFNRMIREKEMRAARRETSRRRPPSGS
PPPPRRRGPSGSPPPPRRRGPSASPPPPRRRGPSASPPPRRRPPSASPPPRSRSSRSPRS
PRVRPPSRHRYSRSRSISRGRLRRSPWSPRRRRTRDRSLSLTRSPSPRRRHRSPLRYRSP
LRSPLRSPLRSPPRSPLRSPPRSPPRTPHRTPLRSPHRSPHRSPHRSPLRSPMRSPRRSA
MRSPPPRAMSPHRYPGLYDELLSPPRRNVEPPYGPRYGPRNNGPPPMYPNMGPKPIPPLS
SIPIQEPPPGYRGRYDGPPFEDIPPGLEPPVPGFEPSPFEKPPYAPIPGPIDRERMPPSN
YRDPYRAPFVEGPPGYRDMPMPPAQNEIPVHVGDPPRYRDNYRGPGPYRDQGPMPYRDGQ
PFREVGPAPPYRDPGFRGGPPAPFRENFRNAPFRDGGFRDNPPHGFREGPAPFRPPSVDP
REPPPANYHDPAFRDGFRDENNPGREMRPGYRPGVRNRGPSRRNPNFEQDRHRDPEGRDR
ERFGDVRDPAERSRDMEKRDRLREDRPREERPRSDRPRDHERTREYEKEREREHERATPE
KKVRGSPKRNRDTRDKRRSESRGRSRDRDGKRDKKEERLRDKTSSERAKEHKEKEKKLRD
KERKKKKREKEKDTDKKKKREKKDKKDKDIVKKEDKEDKEEEVEKSKNKDDTVDEQNKVD
SDNIGDETKINNELGEINIEQKLDSPKGVVKDEPQNELYGDEPAEAIDKEIIQNYVKTED
NEGVKEEVIESNVVPGLKEEPFDGIELQITADELDLKADIEGTTEKEMLAPLPELSKWEV
DDDNTERKEPGEITSPDEEDSGKVTSEVLKRAENAIFAKAIHSLRPIEIKKISSDRAKLY
DDAAQAKGSMNNIQITVPVADPEHRSIEINDKTKKRTSKTPPPRLSVKERLGGKVDDVRR
SREPRVVHSTVERVKSRSKTPKKEQPYRRVTVDRDRSKKPGSVSRIESKGEKPRLIADAR
GLQEKFSSRSPNRDKKRKDIDKGGRESKKIKSEPGVDSRSQDKGTSSAVKTTAERERKKS
TLDEAHFEPDYDETVESDHEGKEDAVGKKRERSMSQTVTSEVKKPKLEEETIKLDLANVK
KKPDTESESSSDSDTSSSSSSDTRKRKKKKKRSSKKKKKRAASDSDSDSDSDSDDHKKKK
KKRKHKKKSSKKKKKSKHK
NT seq
5100 nt
NT seq
+upstream
nt +downstream
nt
atgtctgtgcactataagttcaaaagtgctctagattatgacacggtcacattcgatggt
ctgcatatatcagtaggagatttgaaagctgctatttcccagcagaaaaggattggaaag
acatctgactttgatctgcagataactaatgctcagactaaggaagtgtacagtgatgac
ggtactttaattcctaaaaacacatcactcctagtggcccgagtaccactgtcccagcaa
cctaagaaacagtgggaaggctctaacaacaatgcggcattgcacaaagatgtctctgtt
aacaaagggctggctgatctgtctcgcatggaaggtagcgaacaggataaaataaatgct
atgatttctcagtccacttttgactacgaccctagcaattatcaaaagattagaggacaa
aatcagagaggtgtagtgccatcaaattacgtttgttacaagtgccagaaacatggacat
tggatcaaggattgccctatagctaattcgactgatccaatagagataagaagaagtaca
ggaattcctcgtagttttatggtccctgttgagggacctaaagccccaggagccatgatg
accccaagtggaacctttgctgtgcctgccgtcgatcatgaggcgtacttggcgtccgag
agcgcgggcggcgcggaggtggcggccaacgcgcccgccgcgcccgagcccgccatcccc
gacgagctcatctgcagcttgtgccgcgacctgctcaccgacgccgtcatgatcccctgc
tgcgggaactccttctgtgacgagtgcatacgaggagcattattggagtctgaggaccat
gagtgcccagattgtcgcgaaaaggagatcgcgcccacaacattaattccgaataggttt
ttgcgtaactcggtgtcggcgttccggaaccagacgggctactcccggcgcgcgccgcac
cgcccggcgcaagcgccgccgcccgtcctccacaatttagaacaaccaccaccgggggtg
ccaatgcagctacccccgaacggccctccgccgccgatggccaacaacgatgtgggcggg
cactcgtcggacggctcgtcggacaacatcaccgtgctggtcccgccgcgctacacgcac
cgccgcacgcgccgcccagacgacgccccaaggccgcgcaaaagacacggaccgccagtt
ttgaaacctcctggcatggatgaacctcccaacatgccaatgaatgtaccccgagttgat
gagcagcgagctagcactcccactattgatgaaggaagagatcccatggcatctcaggga
tcgtttaaccgcggtgcgccgccaccgtttgttccaggggtgccgccaccaagacacaga
tttaacgaccccgggtactcgcgtgggcgcgggcgccgcgggccgccgggcccgggcccg
gggcggccgccctacgagcgattcccgcccgagccctaccagccgccgccgcccggcatc
aaggacgagcctaacgggcacggcgaggacccgctcgaggcgttcaaccggatgatccgc
gagaaggagatgcgggcggcgcggcgcgagacctcgcggcggcgtccacccagcggctcc
ccgccgccgccgcgccgccgcgggccgagcggctctccgccgccgccgcgcaggcgcggg
cccagcgcctccccgccgccaccgcgcaggcgcgggccgagcgcctcgccgccgccgcgc
cgccgcccgcccagcgcctccccgccgccgcgctcccgctcctcgcgcagcccgcgcagc
ccccgcgtgcgcccgcccagccggcaccggtactctaggtctcgctcgatctcgcgcggc
cgcctgcgccgctcgccgtggtcgccgcgccgccgccgtacgcgcgacaggtctctgtcc
ttgactaggtcgccatcccctcgtcgccgacaccgttccccgctgcgttaccgctcaccg
ctgcgctcaccgctgcgctcgccgctgcggtctcctccccgctccccgctacgctccccg
ccccgttcgccacctcgaacgccgcaccgcaccccgctccgctcgccgcaccgttccccg
caccgttcgccgcaccgctcgcccctgcgctcgccgatgcgctcgcctcgcaggtcggcg
atgcgatcgccgccgcctagagcgatgtcgcctcaccggtatcctggattatacgacgag
ctgctgtcgccgccgcgccgaaacgttgagccgccgtacggacccagatatggaccaaga
aacaatggcccaccgccgatgtaccctaacatggggccaaaacccattccaccattatcg
agtattcctattcaggagccgcctccaggatatcgcggtcgatatgacggaccgcccttt
gaagacattcctcctggacttgaacctccagtgcctggatttgagccttcgccgttcgaa
aaaccaccttatgcccctatacctggaccaattgatcgtgaaaggatgccgccatctaat
tatcgagatccttatagagcaccatttgtagaaggtcccccaggttacagggatatgccg
atgccgcctgcgcaaaatgaaattcctgttcacgtaggcgatccacctcgataccgtgat
aactatagaggccccggaccgtaccgtgaccaaggcccgatgccgtatagagacggacaa
cctttccgtgaagtgggcccggccccaccataccgtgatcctggttttagaggaggaccg
ccagcgccctttagagaaaacttcaggaatgctccatttagggatggcggttttcgagac
aacccacctcatggttttcgtgaaggtcctgcaccgttcaggccgccgagtgttgaccca
agagaaccacctcctgcgaattaccacgatccagctttccgcgatggctttagagatgaa
aacaatccgggaagagaaatgcgtcctggttatagacctggggttcgtaacagaggacct
tcaaggcgtaatccaaactttgagcaggatagacatagggatccagaaggtcgtgatagg
gaacgctttggggatgttagggatcctgctgaaagatcgcgtgatatggagaaaagagac
cgactccgtgaagaccgacctcgtgaagaacggcctcgtagtgatagacctcgtgatcac
gaaaggacccgagaatatgaaaaagagagagaacgtgagcatgaaagagctacacccgag
aaaaaagttcgtgggtcacctaaacgtaatcgtgacacacgagataagcggcgaagtgaa
tccagaggtcgctctcgtgatcgagatggaaagcgagataaaaaagaagaaagacttcgg
gataagacgtcttccgaaagagccaaagagcataaagagaaggaaaagaaattaagggat
aaggaaagaaagaaaaagaaaagagaaaaagagaaagatacagacaaaaagaaaaaacga
gagaaaaaggataaaaaagacaaggatatcgttaaaaaagaggacaaggaagataaggag
gaagaagttgaaaaatctaaaaataaagatgacaccgtagacgagcaaaataaagtggac
agtgataatattggcgatgaaaccaagataaataatgaacttggtgaaatcaatatagag
caaaaacttgactctccaaagggagtagtgaaagacgaacctcaaaatgaattatatggc
gatgaacctgcagaagcaatagataaagaaataatacaaaattacgttaaaactgaagat
aatgaaggcgttaaagaggaagtcattgagagtaacgttgttcccggactcaaagaagag
ccttttgatggaattgaattacaaattactgcagacgaattagatttgaaagcagatata
gaaggtacaaccgaaaaggaaatgttggcgcctctacccgagctatcaaaatgggaagtt
gatgatgacaatactgaaaggaaagaaccgggtgaaataacctcacccgatgaggaggat
tcgggtaaagtaacttcagaagtcctgaagcgtgctgaaaatgccatatttgctaaggca
attcattccctcagaccaatcgaaataaaaaaaataagcagcgatagagccaaactgtat
gacgatgccgcgcaggcgaaaggttccatgaataatattcaaattaccgttccggtagca
gatcccgaacatagatctatagaaataaatgataaaaccaaaaagagaacatctaaaact
cctcctcctagattgtctgtaaaagaacgattaggtggtaaagtggatgacgtacgtaga
tcgagggaaccacgtgttgtgcatagtacagtagaaagagtaaaatctcggtctaaaaca
cctaaaaaggaacaaccgtatcgtagagtaactgttgatagagatagaagtaaaaaaccg
ggttcagtcagcagaatagaatcaaaaggggagaagccacgtttgatagcggacgccagg
gggttgcaggagaaattttcaagccgtagtccaaatcgcgataaaaaacgaaaagatata
gataaaggtggaagggagtctaaaaagataaagtctgaaccaggtgtcgattctcgcagt
caagataaaggtacgtctagtgccgtaaaaacgactgctgaacgagagagaaagaagtcc
accttggacgaagcacactttgagcctgattacgacgagacagtcgagtctgatcatgaa
ggaaaagaggatgctgtcggtaaaaagcgcgagcggtcgatgtcacaaactgtaaccagt
gaagtgaaaaaacctaaactagaagaagaaacaatcaaattagatttagctaacgttaaa
aagaaacctgataccgaaagtgaatcctcgagcgactctgatacatcgtcatcatcctct
tcggatacccgtaaacgtaagaagaaaaagaagcgtagtagtaagaaaaagaaaaaacga
gccgctagcgacagcgacagcgattctgactccgactctgatgaccacaagaaaaagaaa
aagaaacgtaagcataagaagaagtctagtaagaagaagaaaaaatctaagcataagtaa
DBGET
integrated database retrieval system
