Cydia strobilella (spruce-seed moth): 134744221
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Entry
134744221 CDS
T10503
Name
(RefSeq) intraflagellar transport protein 140 homolog isoform X1
KO
K19672
intraflagellar transport protein 140
Organism
cstb Cydia strobilella (spruce-seed moth)
Brite
KEGG Orthology (KO) [BR:
cstb00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
cstb03037
]
134744221
Cilium and associated proteins [BR:
cstb03037
]
Primary cilia and associated proteins
Intraflagellar transport (IFT) complex A
134744221
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Gene cluster
GFIT
Motif
Pfam:
TPR_IF140-IFT172
Beta-prop_IFT140_1st
Beta-prop_IFT140_2nd
TPR_IF140_C
WD40_WDHD1_1st
ANAPC4_WD40
WD40_CDC20-Fz
TPR_14
Beta-prop_EML_2
Beta-prop_WDR75_1st
WDR55
Beta-prop_WDR90_POC16_2nd
Beta-prop_EML
Gln_amidase
TPR_8
Motif
Other DBs
NCBI-GeneID:
134744221
NCBI-ProteinID:
XP_063534022
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Position
9:7956301..7966576
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AA seq
1361 aa
AA seq
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MTLYIDSKLNFTDSNVVSTLGSWHPSLPLLALGSYNQEKGGFVTIFQENGLALEGCEWPI
LLSNQVTAMAWHPTRKLLVVGWDGGELYIWLEYSWARLEAPHNAALTTVAFSLGGGRLLA
ADAAGSLSGWQSASGAPLTSFHHQLGDVITHVTFCPVRPTGETSIRGLARAAVAGDENAL
DALAAWRPRTTARMREGSQPDNHACYAAQDNGAILYIDHAGSCSEVLNAPGNIIFMGMIS
NVYLLMAWENGGALSLTRFITSDDGNITTDTHVRMAARNGQAIVLTGNYCVAVITGDNLI
RVWDSENGDNDVLPNENDEVVAGDIFTSISYCNLSDTLCCGTSQGNLYFWRRDHRNHWKL
ISSTSIKGTVKEVSWGSEGLMNPLLHVNCITSVFILREQPVCWGYTPNIWMVQKSAYEIA
ITNKMELTSSIKTQITVRAFAFKDQYVALGDGKEVQVWMCSKDNDIKFSLVRTFPWKTDV
LILNNDVLVGVVNPHIECYSVTGNNLGILPSTEGEGEPIGVTYTGKYIVIATMDGTLKLA
EITKKGLRMPYPPKNCYQMIEDFGEVMRASVNCSGRYICLSIANAGLAPDPRLYLWDAAN
DVITNTVLSDSQAPPYQSVPIAIVWDGIDQRIVAVHMRSADLDRVHLFFCHEGSLYEYKN
WCPNSEEYFMSDFMLCSLYTPHVVILSQQSIKKILMHEFEESTSEATNLKQTLDFLYCMT
AGNLEKAVVVGTNITGSRSSVIWDSLAKECVARRRPDVGAVCLSKMGNIKGALMMRKAMN
GNDMDETCQIGVLAINLGMLEEAEKFFREAERPDLITRLLSAKEGGLQEITNGSDEGENI
LLIKSAQHKLAKIMWANGETGAALKLFESAGTLVPHVPRMLIAQGQASVLAQYVANSNDT
NLIMWWSHYQESIGELDGALEAYARANDFGEQTRLLCHMHRIEEAEKLCNKHPAAMYQMA
RYLEMQPDQIETAVKLYIKSGAVASAIRVAAEASAWHLVWRAGSASTTHALHAATILETA
EQTEQAIALYQKAGKPHMALKLALGCGDTSAMLAAVESLGERVEPSLARKLAAHLRRADH
HSHAAALLATAGEYEEALDIVEQSSAPLTEELAERLAAPAGAVGRDALLRRLADVLGARG
LYHHAAKRLASTGDKAGAMRWLMRSGDADRIATFAAATRDRAAQLMAADYLRRHAAWRAR
ADLTRHILHFYTRAKAHGKLAAFYAECAKMEVDEFGNFEKALEALKEATRCLSKTSDPET
GSQIMALQEQSTLVKKYLDLKKLLESGETNDGVASGQQLLRALSGRPGLVTEEKVLKLLV
ELTPSHPDNPTFEKQLQKLTQQPQEDAQSVDSTDQSIEEVI
NT seq
4086 nt
NT seq
+upstream
nt +downstream
nt
atgactttgtacatcgacagcaaactgaactttactgacagcaatgttgtttcaactctg
ggttcctggcatccatccttacctctcttggctttaggttcatataaccaagaaaaagga
ggctttgtgacaatatttcaggaaaatggactggcattagaaggctgtgaatggccaata
ttactatcaaatcaagtaacagcaatggcttggcatccaaccagaaagctactagtagtg
ggttgggatggaggtgaactttacatctggcttgagtactcctgggcgcgccttgaagca
ccccacaatgctgctttgaccacagttgcctttagtttgggcggtggtcgattgctagct
gcagatgctgctggctctctatctggctggcagtcagcctcaggagcacctctaacttct
ttccaccatcaacttggtgatgttatcacccatgtaaccttctgtcccgttcgcccaact
ggggagacttctataagaggattagccagagctgcagtagccggtgatgagaatgcacta
gatgcactggctgcatggagacctcggaccactgccaggatgagagagggctcccaacca
gacaatcatgcttgctatgcagcacaagataatggagccattttatatattgatcatgct
ggttcatgttcagaggttcttaatgctccaggaaatataatatttatgggtatgataagt
aatgtttatctattaatggcttgggaaaatggcggggctctaagcttgacaagattcatc
acctctgatgatgggaatatcactacagatacacatgttagaatggcggcgaggaatggc
caagcaatagttctcactggtaattactgtgtagctgttataactggggacaacttgata
agagtttgggacagtgagaatggagacaatgatgtgttgccgaatgaaaatgatgaggtt
gttgcaggggacatatttaccagtattagctactgcaatttaagtgatactttatgttgt
gggacgtcccaaggcaacttatatttttggaggagagaccacagaaaccattggaagtta
ataagtagtactagtataaaagggactgttaaagaagtcagttggggatccgaaggtctg
atgaatcctctgctgcatgtaaactgtataaccagtgtatttatcctgagagagcagcct
gtgtgttggggatacacaccaaatatctggatggtacaaaaatcagcctatgaaattgct
attaccaacaaaatggagctgacatctagtattaaaactcagatcactgtgagagccttt
gcatttaaagatcaatatgtagctcttggagatggaaaagaagtacaggtgtggatgtgc
agtaaagacaatgacatcaaattttccctcgtgcgcacattcccgtggaaaacagatgtt
ctcatattaaacaatgatgtgttggtgggcgtggttaatccccacatcgagtgctactct
gtcactggaaacaacttgggtattcttccgagcactgaaggtgaaggcgaacctatcgga
gtcacatacacggggaaatatattgttatagcgacgatggatggcactcttaaactcgca
gagataacaaagaaaggactaagaatgccttatccccctaaaaattgctatcaaatgatc
gaggactttggcgaagttatgagagcgtcagttaattgcagtgggagatatatttgcttg
agcattgctaacgccggtctagcgcctgatccaagactatacttgtgggatgcagcgaat
gatgtcataacgaatacggttctttccgacagtcaagcgccaccttaccagagtgtcccg
atagccattgtgtgggatggtattgaccaaagaattgtcgctgtccacatgcgatcggct
gatttggatcgagttcacttattcttctgtcacgagggaagcctttatgagtacaaaaac
tggtgtccaaattcagaggaatactttatgtctgactttatgctgtgttctctctataca
cctcacgtcgttattctatctcaacagagtatcaaaaaaatattaatgcatgaattcgaa
gagtctactagtgaagctacgaatttgaagcaaactcttgactttttatattgcatgacg
gctggaaacttggaaaaagcagtcgttgtgggaacgaatataacgggaagtagaagttct
gtgatttgggacagtttagccaaagaatgtgtggctcgtagaagaccagacgtgggggct
gtttgcttaagcaaaatgggaaacataaagggagcactcatgatgcgtaaagccatgaat
ggcaatgatatggacgagacttgtcagatcggcgtactggctatcaatctaggtatgcta
gaagaagccgaaaagttctttagagaggctgaacgaccagatctaatcacgcgtcttttg
tcggcaaaagaaggcggtctccaagagataacaaatggcagtgatgagggagagaacatt
ttgcttattaaaagtgcacagcataaattggcgaagattatgtgggccaatggggagact
ggtgcggcgttaaaattatttgaaagtgctggaacgttggtgccacatgtgcctaggatg
ctgatagctcaaggtcaagcgtccgtgttagcacagtacgtagctaattctaacgacaca
aatctcataatgtggtggagtcactatcaggaaagtataggggagctcgacggcgcgctg
gaagcctacgctcgcgcgaacgactttggggagcaaacgcggctgttatgtcacatgcac
aggattgaagaggctgagaagttgtgtaataagcaccccgcagccatgtatcaaatggcg
cgatatttggagatgcaaccggaccagattgaaactgcagttaagctgtacataaaaagc
ggggcggtagcgtctgccattcgcgtggcggcggaggcgagcgcgtggcacctcgtgtgg
cgcgccggctccgcctcgaccacgcacgcgctgcacgccgccaccatactggagactgcc
gaacagactgagcaagccatcgcgctgtatcagaaggccggcaagccgcacatggcgttg
aagctggcgctgggttgcggtgacacgagcgccatgctcgcggcggtggagtccctcggg
gagcgcgtagagccgagcctggcgcgcaagcttgccgcgcacctgcgccgcgccgaccac
cactcgcacgccgctgcgctgcttgccacggccggcgagtacgaggaagcgctggacata
gtggagcaatcctcggcaccgttgacagaggagctggccgagcggctagcggcgccggcg
ggcgcggtgggccgcgacgcgctgctgcggcggctggccgacgtgctcggcgcgcgcggc
ctctaccaccacgcggccaagcgactcgccagcaccggcgacaaggcgggagcaatgcga
tggctcatgcggtccggcgacgccgaccgcatcgccacgttcgcggcggccacgcgcgac
cgcgcggcgcagctcatggccgcggactacctgcggagacacgccgcctggcgcgcgaga
gccgacctgacgcgccacatactgcacttttacaccagggccaaggctcacgggaaactg
gcggcgttctacgcggagtgcgctaagatggaagtggacgagtttggcaattttgagaaa
gcgttagaagcgctcaaagaagctactaggtgcttatcaaaaacatcggatcctgagaca
ggatctcaaataatggcgcttcaagagcagagtacacttgtcaagaaatatttggatttg
aagaaacttttggaatccggagaaacgaatgacggagtggcgagcggtcagcagttgcta
agagcgttaagcggacgccctggactagtcactgaggagaaagtgctcaaactattggtg
gaattgactccaagccaccctgataacccaacctttgagaaacaattacaaaagttgacc
cagcaacctcaagaagacgcccagtcggttgattcgacggatcagagtatagaagaagta
atttaa
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