Cydia strobilella (spruce-seed moth): 134744230
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Entry
134744230 CDS
T10503
Name
(RefSeq) nibrin
KO
K10867
nibrin
Organism
cstb Cydia strobilella (spruce-seed moth)
Pathway
cstb03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
cstb00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
134744230
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
cstb03032
]
134744230
03400 DNA repair and recombination proteins [BR:
cstb03400
]
134744230
DNA replication proteins [BR:
cstb03032
]
Eukaryotic type
DNA Replication Termination Factors
MRN complex
134744230
DNA repair and recombination proteins [BR:
cstb03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
MRN(MRX) complex
134744230
BRCA1-C complex
134744230
BRITE hierarchy
SSDB
Ortholog
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Gene cluster
GFIT
Motif
Pfam:
NIBRIN_BRCT_II
FHA
Yop-YscD_cpl
RTT107_BRCT_5
BRCT
Motif
Other DBs
NCBI-GeneID:
134744230
NCBI-ProteinID:
XP_063534039
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Position
9:7935578..7937646
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AA seq
622 aa
AA seq
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MWCLISQIDSRLIYIVVEGNNVTVGRTLDSQCGSFAVIEDASISRKHACLSIIQENLYLQ
DLGSRYGTFLNQTSERLGVTSKVQIKHNDIVRFGKLNSVWTVQEIKYVTCTSTLKGENLQ
SLRIVLGKMGASLKSEWDDTCTYLTMPAITLTIKVVLALAQGSYIVTPQFWNDVLHAVTN
STTLPNPKNFTPQVIESTINKEDVMFLPDERRSKLFTGKKFIFFSRRQLEMYKLVLLKSS
ATPLLLSESKMTKSMLVGPDVVVIQYNIGNTSQESQAQRNLLNDIINYLNSKGKRAVADA
EIGLAILYCSIDKYCNPEFSFTSEVFKQPTTSNNKMMEILAQDTQETQRLQCKKENVMIN
ESLTPKHNSFNTSTMVNTDNVSAKRKLTEDISDNIMNLNKKVATTMHQSMNADGAKRKLT
DEEALGNQNKKMALDTSESNDDAFNFINPTADSEKSTKATEKKLNFFKPARKNLHSAEND
DDLFNFVQDTTKSSNSKQLSIKKMFETRTQTSKETPQTSSSTAAQNNNALKKEESDEEDL
HSRMNDLDLGSTIVMIRRDLIVKKELLKIEDQTDQGKNFKKFKKVWPVKMQVTIIPKSSM
SIIKPEGFDVNEISSLTTSDTE
NT seq
1869 nt
NT seq
+upstream
nt +downstream
nt
atgtggtgtttaatatctcagattgattctagactgatatatattgtagttgaaggcaac
aatgtaacagtaggcagaactttggattctcaatgtggaagttttgcagttattgaagac
gcctcgataagtagaaaacatgcatgtctgtcaataattcaggagaatttatacttacaa
gacttgggttctcggtatgggaccttcttgaatcaaaccagtgaaagactaggagtgact
tccaaggtgcagattaagcacaacgatatagtaagatttggaaaactcaatagtgtttgg
acagttcaggaaatcaaatatgtgacatgcacttcaactttgaagggcgagaatcttcag
agtttaagaatagtgcttggaaaaatgggtgcttcattaaagagtgagtgggatgacaca
tgtacatatctaactatgccagctataacattaacaataaaagttgttctagcattagca
cagggctcttatatagttacacctcaattttggaatgatgtcttacatgctgttacaaat
agcacaacattgccaaacccaaaaaacttcaccccgcaagtcatagaatcaactatcaac
aaagaagatgttatgtttcttcctgatgagagaaggagcaaattattcactggcaaaaaa
ttcattttcttttcaagaagacaactcgaaatgtataaactggttttacttaagagctct
gctactcccttattattaagtgaatccaagatgacaaagtctatgcttgtcggccctgac
gttgttgtaattcaatacaacattggtaacacctctcaagaatcacaagcacaaaggaat
ctgttaaatgatatcattaactatctcaacagcaaagggaaaagggctgttgctgatgcc
gaaattggcctggccatattgtattgttctatcgacaaatattgcaatccagagtttagc
ttcacttctgaagtctttaagcagccaacaacttctaacaataaaatgatggaaattctt
gcacaagacacacaggaaacgcaaagattgcagtgcaagaaagaaaatgtcatgataaat
gaaagtttaacaccaaaacacaacagttttaacacatctactatggtgaacactgacaat
gttagtgccaaaagaaaattaactgaagatatctctgataacattatgaatttaaataaa
aaggtggcaactactatgcaccagtcaatgaatgctgatggtgctaaaagaaagttgact
gatgaggaagcacttggtaatcaaaataagaaaatggcgttagacactagtgaatctaat
gatgatgccttcaattttatcaatccaacagctgattcggaaaagtctactaaggcaact
gagaaaaaacttaatttcttcaaaccagccagaaaaaatttacactctgctgaaaatgat
gatgatttgttcaactttgttcaggatacaactaaaagttctaattccaagcaactgtct
ataaagaaaatgtttgaaacgagaactcaaaccagtaaagagacacctcaaacaagctct
tcaactgcagcacaaaacaacaatgctctaaaaaaagaggaatctgatgaggaagacctg
cacagccgaatgaatgacttagatctagggtccactatagtaatgatcagacgggactta
atagtcaagaaagaattactaaaaattgaggaccaaactgaccaaggaaagaatttcaaa
aagttcaagaaagtgtggcctgttaaaatgcaggttacaatcatacctaaatcatcaatg
agcatcattaaacctgaaggttttgatgtcaatgaaataagtagtttgactacaagtgat
actgaatga
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