Cydia strobilella (spruce-seed moth): 134744377
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Entry
134744377 CDS
T10503
Name
(RefSeq) small subunit processome component 20 homolog
KO
K14772
U3 small nucleolar RNA-associated protein 20
Organism
cstb Cydia strobilella (spruce-seed moth)
Brite
KEGG Orthology (KO) [BR:
cstb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
cstb03009
]
134744377
Ribosome biogenesis [BR:
cstb03009
]
Eukaryotic type
90S particles
U3 small nucleolar RNA-associated proteins
134744377
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UTP20_N
UTP20
UTP20_C
HEAT_EF3_GNC1
Motif
Other DBs
NCBI-GeneID:
134744377
NCBI-ProteinID:
XP_063534228
LinkDB
All DBs
Position
9:13076010..13096125
Genome browser
AA seq
2790 aa
AA seq
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MKIKPVKHKTTNTFRFVPFAERINSIDIRHAALYHIEHAYTEQPEENETHFHLALRKWHG
LNLTLNFKKFKKEVFGVITVPQLVHRKDDVVEILEKYLNLEDQLCLQPLLEILVSLAKDL
RDDFYPYFPRFLDILIRLLKTKDAERLEWTLVCLAFLFKILKPYLKKDLAVVLKRIIPLL
SESQPQYINNFAAESFAFVARDIRDKKKFIELILNYLQTNDDAISGCGHLIFEIIKGVPG
KFHSCVETFIPLLLQHLKEYRPHQEILFKLLTQTFEDSLQTINYKEFSIFWTSILKYTEE
ILKEDKQNKGLEFILRLAGQVIEHQKGKYLINPPQFVLVLIKVICEQSAENVLQVCAQIG
ALLLLSPNVSLSQEHAGIIVKVLLPLPFPNILVNFVQNVIDYTQFDMHILPPFLKYVIQS
DFDKDAMTTLSKICLKKSPLSMNGIKLFEWVKYPLDFGPNLPMFMEHFSRIINDDINNII
EDPLKLMHVLFCLPHIDKINIDSCVTALSQLISKLVHILTSYNLENQSGGNKYHCSTTEL
SKSARKVLFILANAMESAIHISSCRNLKAICDIDTLLPVILPYAADPNYLAALHLTDLYL
AACEQDNILSSPVLAMIDSYLNANVSSPFHVIRLLTTHIYKLFENTEPLNKTAQVGGTTE
KLSVFSMCYSVESTVPSIQEYRAQQNTLQKMVFNTTQYALIKDTDFHLYPINYMFGVLYM
NFKLLWEPVTEFIASYGNSLATDEFWPIFYKMLQTAFDNAKKNLKQFKFDDEFECDFDLL
KEIYAEHNNISERPDVYNYRDLLLKAMTNCIQVCETRNRDVVVLFLNFIEEEYKRTDKAN
ALKIDVESRSNAMNVDDDKPDEENVNDANVEDITDIVEDVKETVSGKVTFKTLINVMQVL
AQFKNPRALHKESVFWELYMEFLKHKNAGLQKFALDCVINYKNKSIVAYKSNLYNLVDDK
KFKDELTLFKITEDAQNIHADDREHVIPIILRILYGKMTSKMATDKKGGGQTRRSLIMRY
VAGCNEKELKMFVEMAFSHVKHYITMQPKEIYESIVSTLDLKSVIIPGKLHSILNLFEVV
REYFGGYLKDELLSDLLKIFISVCSTVGAVLAHGDKVHVGYSKVMKNLRTLAIGILTKLF
DQFDKYTWSSDELNVLFETLIWPLMSKLHIEGIHSPTALLKLLNTWCQNPRYYVLLVTCP
EQDPSLSAIPEIFKLLLAPKTTPVVVNMILDMVEKLLTLTEDEEDKELPAIVPLNTTQVE
SNTDLSVEMNFGSKILIPHIPSILEVMKRRIANSAKSNTMNKRDLLILSRVTELVASPEL
CDDLLTLLLPILVKKVCMNMAEENMEHAVNTIINLLGHSTNPQTYIKNIAVLFNKITLID
VRKLLLKLLSSIAETAPKNKEILARISNVISEMNAFNKRWIEQPDFDRRLDAYKTIYQLL
DDNQIDLDLAILIVNNCFYFIRTEKDIGLRDGAAICLKKILPKLLLKYWSATDGQFLVRD
TVLSLISNGIRDSKNEILRNESINLLGELARDCPSTDVVLSDLAHLTNNEDREVDFFDNM
CHLQMHRRVRALMKFCKVAKKITKCPSPRTLTNFILPLATIYICDDKYTDKNTLIDACIE
TVSTCCRLLPWYHYEVILKLYLNKMRHASDHQKQLTRLVVSILDAFHFDFSKAKNIELPK
ALLANIDNRPQKNKKGKEDKTVNGGIVKAKNNEKDEELIDDDEGNDEKESGEAEKSTENL
EETQIDIDSELKAADAEAETEEPVSKEVATVPAFERVTQVPPSLAKRIIKSLSAGLLPQL
NRAIGKLTEHEESHKVNRRRLGLERQAEDMLRVPIALALVKLLQRLPGDVLRHHLPGIII
KLCSFLKSPLKQVRITARDIVKKIMVTIGTAYIGILLQHLTLLLTRGFQVHVLVATIHSV
LDALKTDFKPGELNENLDYILDVCANDLFGALSEEKEVDKLHYKTPEAKPSKKSYVTLMI
VSQNITESCLINLLLPFKEVLQKHQSKKIVTKVQEALTHITSGLVTNKFIDIESLFIFLH
GIASESIPEFVLGAPKREITQKQKEKMLIAKPDCFIIPETPKRNKEVQAKHVKVSAKANA
HVLVEFSLNILYVILKREKVARVECRAFVDPLIPLLVDALRSDHVKVTTVALKCIGTLWT
IRVSTPTLEEMVKDIVKTMFLILHKYATFEISKQNDNYHLVRNAFKAITVLIRNVKYYTM
EADQLKTLLLYAEEDCQNDEKQASSFSLLKAILEAKLVSTELHEVMEKVSKICILSESAR
SRDEARAIFVMYLTNYSPGKRLERYIQFFVAQLNYELQHGRESSLKFLEMIISKLQVAQL
TKQSDYLLLALGACMLNDSAPSCRAAAAACIELMLTRFPAVERNKLFDLITTFFEDTQPV
HFELAAQLSIRFVNVEGDEFKSRLTTILPLVSGKVLLLTNDIGTGRFVKIQLEHADDKTD
EEKQREKDHSLIQMLNLIDKITVQCESSLKNKKYINDYDEIAQQCQALLAYPHAWVRLRA
AKVIHQILLSVDPQELDVIVRKKVESDRGFIFDNTEEALRSLVLDLCAQYTAGVSQEMAE
QVTAVLFQILKLVHSLPSFKLPSKIKDEADMEGGGKVNIRWILFKLRKACNVEVAKAPGS
MNIRISIFTMLLHLISSFETNDINSIVDILLPPLVREMSTGDPMAPASPVKQLATRVGKK
LRRRIGDIEYSKLLAEAQTRLNIRRAERKKVLLQEKVNNPEKAAKRKLQLKEKKKQSKKM
KLEMMQGKRPRPKKRKAEDFDIEDALLGDD
NT seq
8373 nt
NT seq
+upstream
nt +downstream
nt
atgaagattaaacctgtaaaacataaaacaaccaacacctttcggtttgttcctttcgct
gaacggattaactctatagacatccgacatgcagccctttaccacatagagcacgcatat
actgagcaacctgaagaaaatgaaactcacttccatctcgccttaaggaaatggcatgga
ctaaacttaacactaaacttcaaaaagtttaagaaagaagtctttggagttataacagtt
ccacagttggtccataggaaggacgatgtggtagaaatattagaaaaatatttaaattta
gaagaccaactgtgcctacaacctttactggaaattctggtgtcacttgccaaagacctg
agagatgacttctatccatacttcccaagatttctggacatcttgataagactactaaaa
acaaaagacgcagaaaggcttgaatggacactggtctgccttgcatttcttttcaagatc
cttaaaccataccttaagaaagatctagcagtagtgctgaagaggataataccactgttg
agtgaatcacagccacagtatatcaataattttgcagcggagagcttcgcatttgtggct
cgggatatacgagacaagaagaagttcattgaacttatattgaattatctgcagacaaat
gatgatgcaatatcaggatgtggccacctcatatttgaaatcattaaaggtgtacctggc
aagttccacagctgcgttgaaaccttcattccactgcttttacaacacttgaaagaatac
agaccacaccaggaaatactcttcaagctcctcacacaaacattcgaggacagcttgcag
acaatcaattataaagaattctccatattctggacaagtattctgaaatatacagaagag
atacttaaagaagataaacaaaataaaggccttgaatttatactgagacttgctggtcaa
gtgatagaacaccagaaaggaaaatacctaataaatcccccacagtttgttctcgtcctg
atcaaagttatttgtgagcaatcagctgaaaatgttcttcaagtttgtgcccaaatagga
gcattgttactcctctctccaaatgtgtcattatctcaagaacatgctgggatcatagta
aaagtactactgccattaccattcccaaacattctcgtaaattttgtgcaaaatgtcatt
gactatacccaatttgacatgcacatattgccaccttttttaaaatatgtcatccaatct
gattttgacaaagatgctatgaccacacttagtaaaatatgccttaagaagtcaccactg
tccatgaatggtataaaactttttgagtgggttaaatatccccttgattttggaccaaac
ctccctatgtttatggagcacttctcaagaataattaatgatgacattaacaatatcatt
gaagatcctttgaaattgatgcatgtgctgttctgcctgccgcatattgataaaataaat
attgatagttgtgtgactgcattgagtcaacttatatctaagctggttcacatattgaca
agttacaacctggaaaatcagtcaggtggcaataaataccattgcagcactacagaacta
tctaagagtgcaagaaaagtcctattcatacttgcaaatgcaatggaaagtgctatccac
atttccagctgtagaaacttgaaagcaatttgtgacatagatacactgttgcctgtgata
ttgccatatgctgcagatcctaactacttggcagcattgcatttgacagatttgtatttg
gcagcatgtgagcaagacaatattttgtcttcccctgtactggcaatgattgattcttat
ctcaatgccaatgtttcttctccatttcatgtgattcgcctgttaactacacatatttac
aaactgtttgagaacacggaaccactaaacaaaactgctcaagtaggaggcactactgaa
aaattatcagtattcagcatgtgttactctgtggaatctactgttccctccatccaagaa
tacagagcacaacagaacacactacagaagatggttttcaatactacacagtatgcacta
ataaaagatacagatttccacctatatcccataaattatatgtttggggtgttgtatatg
aattttaaattattatgggagccagtcaccgaattcattgccagttacggcaattctctt
gctactgatgagttttggcctattttctacaaaatgcttcaaaccgcttttgacaatgca
aaaaagaatttaaaacaattcaagtttgatgacgaattcgaatgtgactttgatctattg
aaagaaatctatgcagaacataataatatctcagaaagaccagacgtatataattacaga
gacctgttattgaaagcgatgactaattgtattcaggtgtgtgaaacaagaaacagagat
gtagtggtattgtttttgaactttattgaagaagaatataagagaactgacaaagcgaat
gcccttaaaattgacgtagaaagcagaagtaatgccatgaatgttgatgatgataaaccg
gatgaagaaaatgttaatgacgctaatgtagaagatattacggatattgtagaagatgtc
aaagaaactgtttctggaaaagttacatttaaaactcttatcaatgtgatgcaagtttta
gcacagtttaaaaatccaagagcacttcataaagagtcagtattctgggaactttacatg
gaatttttgaaacataaaaacgccggtctacagaagtttgccttagattgtgtcataaac
tacaaaaacaaaagcatagttgcatataaaagcaatttgtacaatttagtagacgacaaa
aagtttaaagacgaattgactttattcaaaattactgaagacgcacaaaatattcacgcg
gatgatagagaacatgtgatcccaatcatcctcagaattctttacgggaagatgacgtct
aaaatggcgacagataagaaaggaggcggtcaaactaggagatctctaatcatgagatat
gtggctggctgtaatgagaaagaactgaaaatgtttgttgaaatggcattctctcatgta
aagcactacatcacaatgcaacccaaagaaatatatgaaagcattgtctctaccttagac
ttaaaatccgtaattattccaggaaagttacatagcattctgaatttgttcgaagtggta
cgtgaatatttcggaggatacctgaaggatgaattgttatcagatttattaaagatattt
atatctgtgtgttcaacggtgggggctgttctggcccacggggacaaagttcatgttggt
tattctaaagtaatgaaaaacctcagaacattagccataggtatactgacaaagctattt
gaccagtttgataagtatacttggagttcggatgagctgaatgttttatttgaaacactg
atctggcctctaatgtcaaaattacacattgaaggtattcacagtccaactgcacttttg
aagctattgaacacgtggtgccaaaatccaagatattacgttttgcttgtgacttgtcca
gaacaggatccctcactgagtgcaatacctgagatattcaaacttctactggcgccaaaa
actactcctgtagttgttaatatgattctagatatggttgaaaagttattaaccttaaca
gaagacgaagaggacaaggaactacctgctattgtgccattaaacactacgcaagtagag
tctaatactgacttgtctgttgagatgaattttggcagcaaaattttgataccacacatt
ccaagcatattggaagttatgaaaagacgcatcgcaaactcagctaagtcaaataccatg
aacaaaagagacttgctgatactttcgcgggtcacagaacttgtggcttcgccagaatta
tgtgacgatcttctgacccttttactaccaatacttgttaagaaagtgtgcatgaatatg
gcagaagaaaatatggagcatgcagtcaataccattattaacttattaggtcacagcact
aatcctcaaacatatatcaagaatattgctgtacttttcaacaaaataactctaattgat
gttaggaaactcctacttaaactgttgtcttcaatagcagaaacagctcctaaaaacaaa
gaaattctcgctcgtattagcaacgtaatatccgaaatgaacgccttcaacaagcgatgg
atcgagcagcctgattttgataggagactagatgcatacaagacaatttaccagttgcta
gatgacaaccaaatcgatctagatctcgctatactaattgtcaacaactgtttctatttc
atccggactgaaaaggatataggattgcgtgatggagccgctatatgtttaaagaagatt
cttccaaaattgcttttaaaatattggtcagccactgatggtcagtttttagttcgcgat
actgttttatctcttatatcaaacggcatcagagactcaaagaacgaaatactaaggaac
gaaagtataaatctccttggtgaactagcgagggattgtccaagtaccgacgtagtttta
tcagacctggcgcatttgaccaataacgaggacagagaagtagacttcttcgataacatg
tgccatttacaaatgcacaggcgcgttagagcactaatgaagttctgcaaagtagccaag
aaaattactaaatgtccttctccaagaacgctcaccaattttatcttgccattggctacg
atttacatatgcgacgacaaatacacagataaaaacaccttgatagacgcgtgtatagaa
acagtttcaacttgctgtagattacttccttggtaccattatgaggtgatattgaagttg
tatctgaacaaaatgcgtcacgcttcagatcatcagaaacaattgacgcgattggtcgtc
agcattctagatgctttccactttgatttctctaaagctaagaatattgagttgcctaaa
gctttgctagctaacattgataatagaccacagaagaataagaaaggaaaagaagacaag
actgtaaacggtggtattgtaaaagcaaagaataatgaaaaggacgaagaactaatagac
gatgatgaaggaaatgatgaaaaagaaagtggtgaggctgaaaaaagtacagagaattta
gaagagacgcaaatagatatagattcagaattaaaagctgccgatgcagaagcagaaact
gaagagccagtgagtaaagaggttgcaaccgtgccggcttttgagagggtcacgcaagtc
ccaccgtctctggcgaagagaattatcaagtctttgtcagcagggttgcttccacagctc
aatcgcgctatcggcaagctgacagagcatgaagagtcccacaaggtgaaccgccggcgt
ttgggcctggagcggcaagcggaagacatgctgcgagtgccaatcgccctggctttagtt
aaactgctgcagcggctgcctggcgatgtgctgcgacatcacctgcctggtatcatcata
aaactctgttcattcctgaaatcgccgctaaaacaagtgcgaatcacagctcgagacatc
gtcaagaaaatcatggtcaccatcggaactgcctatataggcatcctgctacaacacctc
actctactcctcacgagaggattccaagtacatgtattagtagctacgatacattccgtc
ttagatgctttgaaaacagatttcaaacctggagaactgaatgaaaatttggactacatt
ttagatgtttgtgctaatgatctatttggagcattatctgaagaaaaagaggttgataaa
ctacattataaaacaccagaagctaagcctagtaagaaaagttatgtgacgttgatgata
gtatctcagaacataacagaatcatgccttatcaacttacttttacctttcaaagaggtt
ctacaaaaacaccaatcgaagaaaatcgttacaaaagttcaagaagctctaacacatata
accagtggtttagtgacaaacaaattcatagacatcgaatcactattcatatttttacac
ggtatagcgtcagaaagcattcctgaatttgtacttggtgcacctaaaagagaaataaca
cagaaacaaaaagaaaagatgcttatagctaagcctgattgttttataatcccagaaacg
cctaagagaaataaggaagtgcaagcaaaacatgtaaaggtatcggctaaagctaacgct
catgtcttagttgaattcagtttgaacattctatacgtgatccttaagagagagaaggtt
gcaagagtggaatgcagggcgttcgtggatccattaatacctttactagtagatgcgttg
aggagcgaccatgtcaaagtaactactgtagccttgaaatgtattggaacgctatggact
ataagagtcagtacgccgactctcgaagaaatggtgaaagatattgtgaagactatgttc
ctgattttacataaatatgctacgtttgaaattagcaaacagaacgacaattaccattta
gttaggaatgcatttaaagcaatcacagttctcatccgaaacgtgaaatactacacaatg
gaagccgaccaactgaaaacgcttttactgtacgccgaggaggattgccagaacgacgag
aaacaagcgagctcattctccttactgaaagctattttagaggctaaactcgtttccacg
gagcttcacgaggttatggagaaagtatctaagatatgtatcttgagcgaatcagcgaga
tcaagagacgaagctcgagccatattcgtgatgtacttgactaactactcgccgggcaag
cggctggagcgttacatccagttcttcgtggcacagctcaactacgagctacaacatggc
agagaatcctcgctcaagttcctggagatgatcatcagcaagctgcaagtggcgcagctc
accaagcaaagcgactacctcctgctggccctgggcgcttgcatgctgaacgactcggcg
ccctcgtgccgcgccgccgccgccgcctgcatcgagctcatgctcactaggttccctgcc
gtggagaggaataaactgttcgatctgatcaccacgttctttgaggacacgcagccggta
cacttcgagctcgcagcccaactgagcatacgcttcgtcaacgtcgagggcgacgaattc
aaaagccgactcaccaccatattaccgctagtcagcggcaaagtcctcctcctaaccaac
gacataggcaccggacgcttcgtcaagatacaactagaacacgcggacgacaagactgac
gaggaaaaacagagagaaaaagatcacagtctgatacaaatgctcaatctaatcgataag
atcactgtccaatgcgagtctagtttgaaaaataagaaatatataaacgattatgatgaa
atagcgcagcaatgtcaagcgttgctagcgtatcctcacgcttgggttagattaagggct
gcgaaagttatacaccagattttgttatccgttgatcctcaagagttagatgtgatagtt
agaaagaaggttgaaagtgatagaggttttatttttgataatacggaggaggcgttgagg
agtttggtgttggatttgtgtgcgcagtacactgctggtgtttcacaagaaatggctgaa
caggtcacagcagtactattccaaattttgaagctagtgcactctctgccgagcttcaag
ctgccgagtaaaataaaggacgaggccgacatggaaggcggtgggaaggtcaacattcgc
tggatactgttcaagctcaggaaggcctgcaacgtggaggtcgctaaggcgccgggctcc
atgaatatccgcatctcaatcttcaccatgctgcttcacttaatcagctccttcgaaacc
aacgacatcaactctatagtggacatccttctaccgccgttagttcgcgaaatgtccacc
ggcgacccgatggcgcctgcgtcgcccgtcaagcaactcgccacgcgggtcggcaagaag
ctaagaaggagaataggggatattgagtatagcaagttgctggctgaggcgcagaccagg
ctcaatattaggagggcggagcggaaaaaggtgttattacaagaaaaagtcaacaacccc
gagaaggcggctaagaggaagcttcaactgaaggaaaagaagaaacagtcgaagaagatg
aagctagaaatgatgcagggcaagcggccgcgccccaagaagaggaaagcggaagatttc
gacatcgaggacgcgctgttgggagatgactag
DBGET
integrated database retrieval system
