Cydia strobilella (spruce-seed moth): 134744384
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Entry
134744384 CDS
T10503
Name
(RefSeq) vacuolar protein sorting-associated protein 18 homolog isoform X1
KO
K20181
vacuolar protein sorting-associated protein 18
Organism
cstb Cydia strobilella (spruce-seed moth)
Pathway
cstb04140
Autophagy - animal
cstb04142
Lysosome biogenesis
cstb04145
Phagocytosis
cstb04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
cstb00001
]
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagocytosis
134744384
04142 Lysosome biogenesis
134744384
04140 Autophagy - animal
134744384
04148 Efferocytosis
134744384
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cstb04131
]
134744384
Membrane trafficking [BR:
cstb04131
]
Endosome - Lysosome transport
Tethering complex
CORVET complex
134744384
Hops complex
134744384
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Pep3_Vps18
VPS18_solenoid_2nd
VPS18_solenoid_1st
VPS18_RING_C
Clathrin
zf-C3HC4_2
zf-RING_16
zf-RING_11
DUF4562
Motif
Other DBs
NCBI-GeneID:
134744384
NCBI-ProteinID:
XP_063534244
LinkDB
All DBs
Position
9
Genome browser
AA seq
989 aa
AA seq
DB search
MTSIIDQMEQHSQVSTRFPGPEPMTSSGYINMQLEDNTPMFSKQKMKFNPTDSITHVAVA
SDYLVLAMANGKLFRMDLKRPDQNEELQYSKFVQPNTRLTGIFLDPLGYHLLLAFAARNK
DGNPELVYLHRRSSKLKSVTKSRNYEVTEVCWNNENTSEVTTGPILLGTSQGHILETELE
ADSDKMFTANQQYWRQLPNYLPLYGGKEIDGLIFDIVDKDSNPPITGIQFHRVNNTSKFF
VFITTPTKLYQFIGFAVTTDGKLSLQSIFHKYLTIPETGIQEIPSSLKYSKLQFYFDHNN
VPKTFAWLTGPGIFYGQLDPSSQQNSNSLFTQAGLINYPDDKDKDDKDRAPLSFVLTEFH
ALLMYPDRVKAVSLLNHELVHEDIYSEAHGKLKSIVKDFRKRTIWAVTDKTLFRYKIVRE
ERDVWKIYSDKEQFDLAKEYCFNNPAYIDIINVKQAELLFAKADYDKSAEIFADTQSSFE
TVCLKFLEADQTNALKIYLNRRLESLNEDDKTLISMIVIWITELYLSQLGVLRRTGQEDT
QKYHQLQSDFEVFLVQPRVQKCMQHVKKVIYDLMSSHGDKQNLIKLTILNEDYENVIAQN
IYKKSYAEALSTLSTLKKPDLFYQFAPVLMEEEPRLTVNTLIAQGTRLNYLKLLPAFLSC
ENDEAHVGEIMRYLEFIMQNFNVKDTAIHNYLLTLYAEHDKVALMRYLERQGQDAVLVNY
DVHYALRLCRERELPEACVKLSALLGLWEAAVELALQVDLALAKSVAARPPEPATQRALW
LTIAEHVITKNQDLREAMSFLTECPLLKIEDLLPFFSDVVTIDHFRDPICQSLQEYNCQI
KELKAEMDEATQAAESVRADIKSFRNRSVCVSVSETCCLCEIALLLRPFYLFPCGHKFHS
DCTRAQAIDILSPVRRNKLADLQRQLNVLSKIELSTITSSGLPLREVLRNEIDDIVANEC
IFCGEHMINCIDKPFIAEEDWDRVMKEWE
NT seq
2970 nt
NT seq
+upstream
nt +downstream
nt
atgacttcgataattgatcaaatggagcagcactcccaagtttcgacgaggttcccgggg
ccggagcctatgacgtcctcgggctacatcaacatgcagctcgaagacaacacgcccatg
ttctcaaagcagaagatgaaattcaaccctactgactctatcactcatgtagcggtggcg
agcgactatttggtgctagccatggccaatgggaaactgtttcgaatggatttgaaaagg
cctgatcaaaatgaggaactccaatattcaaagtttgtccaaccaaacactcggctgaca
ggaatattcctcgacccactaggctaccacctgctcctggcctttgccgccagaaacaaa
gatggtaaccctgaactcgtctatttacaccgaagaagctccaaactcaaatctgtcaca
aaatctaggaactatgaagtgacagaagtttgctggaataatgaaaatacttctgaggtt
acaacgggtcccattttgcttgggacatcacagggacacattttggagactgagttagaa
gcggatagtgataaaatgtttacggcaaaccagcaatattggcgacagctgcctaattac
ctcccgctgtatggagggaaggagatagatggtttgatattcgacatagtggacaaggac
tccaaccccccaatcacgggcattcagttccaccgcgtgaacaacaccagcaagttcttc
gtgttcatcacgaccccgaccaagctgtaccagttcatcggtttcgctgtcactacggac
ggcaagctgtccctacagtctatattccacaagtacttgacgatcccggagacgggtatt
caggagataccttcgagcctcaagtactccaaactgcagttctacttcgaccacaacaac
gtgcccaagaccttcgcctggctcacgggccctgggatattctacggacagttggacccg
tcatcgcagcagaactccaactccctgttcacccaggcaggcctcatcaactaccccgac
gacaaagacaaggacgacaaagacagagcacccctctctttcgtactcacagagttccac
gccctcctcatgtacccggaccgcgtcaaggcagtatcgcttctcaaccacgaactcgtc
cacgaagacatttattccgaggcccatggaaaattaaaaagcatagtcaaagatttcaga
aagagaaccatctgggccgtcacagataaaactctatttagatataaaattgttagagaa
gaacgagatgtatggaaaatctattcggataaagaacagtttgatttagcgaaggaatac
tgctttaataacccagcgtatatagatattattaatgtcaaacaagccgagttgctgttc
gctaaagcggactatgacaaaagcgcagaaatatttgcagacacgcaaagcagcttcgaa
actgtatgccttaagtttctagaagcagatcagacgaatgccttaaaaatatacctgaac
aggcgattagaatctctaaatgaagacgataagactctaatttcaatgatagtcatctgg
attacagaattatatctatctcagttaggtgtgctaagacgaacagggcaagaagatact
caaaagtatcatcaactgcaaagcgattttgaagtgtttttagtgcagcctagagtacaa
aagtgcatgcaacatgtcaaaaaggttatatacgatcttatgtcttcccacggcgataag
cagaacttaatcaaactaacaattttaaatgaagactacgaaaacgttatagcgcaaaat
atttacaagaaatcttacgcagaagcattaagcacactctcaactttaaagaagcccgat
ttattttaccagtttgctcccgttttgatggaagaggagcctagattgacagtgaatact
ctaatcgcgcaaggcacaagactgaattacctcaaactactcccagcttttctgtcctgt
gagaacgatgaagctcacgtgggtgaaatcatgaggtacttggagttcataatgcagaac
ttcaacgtgaaagacacggccatccacaattatctgttgacattgtacgcggaacatgac
aaggtcgcgctcatgaggtatttggagaggcagggacaagatgccgtgttggtgaattat
gatgtccattatgctttgagattatgccgcgagagagaactccccgaagcttgcgtcaag
ctatccgccttattaggactctgggaggcggccgtggaactcgctttacaagtggacctg
gcgctagccaagtccgtggccgcgcggcctcccgagcccgccacacaacgtgccctgtgg
ctgactatcgcggaacacgtaatcaccaagaaccaagaccttcgggaagccatgagcttc
ctcacagagtgtccgctcttgaagatagaggacctacttcccttcttcagcgacgtggtc
actatcgaccacttccgcgaccccatctgccagtcgcttcaggaatacaactgtcaaata
aaggaattgaaagcagaaatggacgaagccacccaagccgctgaatccgttcgcgcggac
ataaagtcgttccgcaaccgcagcgtgtgcgtgtcggtgtcggagacgtgctgcctctgc
gagatcgcgctgctgctgcggcccttctacctgttcccgtgcgggcacaagttccacagc
gactgcacaagggcccaggccatagacatactgagcccagtccgccgcaacaagctagcc
gacctccagcgtcaactaaacgtcctctcaaagatagaactgtctactataaccagcagc
gggttaccgctgagagaagtactgaggaacgagatcgatgacatagtggccaatgagtgc
atcttctgtggcgagcatatgatcaactgtatagacaagccgtttattgctgaagaggac
tgggaccgagttatgaaggaatgggaatag
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