Cydia strobilella (spruce-seed moth): 134744538
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Entry
134744538 CDS
T10503
Name
(RefSeq) RNA polymerase-associated protein CTR9 homolog isoform X1
KO
K15176
RNA polymerase-associated protein CTR9
Organism
cstb Cydia strobilella (spruce-seed moth)
Brite
KEGG Orthology (KO) [BR:
cstb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cstb03021
]
134744538
Transcription machinery [BR:
cstb03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
PAF1 complex
134744538
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_2
TPR_19
TPR_1
TPR_12
TPR_14
TPR_8
TPR_17
TPR_10
TPR_11
TPR_16
TPR_CcmH_CycH
ARM_TT21_5th
ANAPC3
SNAP
Coatomer_E
TPR_Slam
TPR-S
DUF2225
DUF6584
Motif
Other DBs
NCBI-GeneID:
134744538
NCBI-ProteinID:
XP_063534425
LinkDB
All DBs
Position
10:14616383..14637271
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AA seq
1115 aa
AA seq
DB search
MYIYRGDTENAAQCFERVLKVQPGNYETMKILGSLYANSASQSKRDIARQHLKKVTEQFP
DDVEAWIELAQILEQNDLQGSLNAYSTAMKILKEKVNADIPAEILNNVAALHYRLGNLHE
AKTYLEEALEREKVDAETLDAQYYKSIAVTTTYNLARLNEALCMYNKAEKLFKDILKEHP
NYIDCYLRLGCMARDKGQIYEASDWFKEALKVNTEHPDTWSLLGNLHLAQQEWGPGQKKF
ERILQNSSNASDAYSLIALGNVWLQTLHQPSREKDREKRHQERALAMYKQVLKVDVKNIW
AANGIGCVLAHKGCVNEARDIFAQVREATADFPDVWMNIAHIYVEQKQYINAIQMYENCI
RKFRMHHDVEWLTWLARAHGLAGRPQAARAALLRARRVAPHDTALLYNAALTLRRLASHV
LKDERSSLDVVLRAVHELQVSHKYFQRLASTESGEGAERARYEPAAAAAEARTCADLLSQ
AQWHVARARRQHDEEVTMRDRQREQRENFRKQQEEERRRREEQQQKSTVEQLQKRQEFKE
KTKNAMLFADMPLEEKRKGGRGRRRDEYVSDSGSGSDRPNEEKKKKGVKKKRLLKRRTRS
SAPNSGSRSSPRKLSPRPSPTRTQAVAARAVAVAAAVAVGAAVAIAVRPLKEAGRGLCPT
AIVTDHVPKAVRNPAADLAPAQPRAGPGQRAARGPSPAHDRRAAPVPRAGPGRRAVQGRR
AGRGRRAGRGRRVGRGRRAGRGQRAGRDLRVARGPRVDQGPRVGLRAGRGHGRRAARGHG
QDQKASRVRNRVPVPRVGRAAARPAPPRPSPGSPCRPATTTTSRTPHSSCRPATTTTSRT
PHSSCRPATTTTSRTPHSSCRPATTTTSRTPHSSCRPATTTTSRTPHSSCRPATTTTSRT
PHSSCRPATTTTSRTPHSSCRPATTTTSRTPHSSCRPATTTTSRTPHSSCRPATTTTSRT
PHSSCRPATTTTSRTPHSSCRPATTTTSRTPHSSCRPATTTTSRTPHSSCRPATTTTSRT
PHSSCRPATTTTSRTPHSSCRPATTTTSRTPHSSCRPATTTTSRTPHSSCRPATTTTSRT
PHSCRPATTTTSRTPHSCRPATTRGGCVCPVKARV
NT seq
3348 nt
NT seq
+upstream
nt +downstream
nt
atgtatatctatagaggagacactgagaatgccgcccaatgcttcgagagagtcctcaaa
gtccagcccggcaactatgagaccatgaagatcctcggctcgctgtacgccaattcagcg
tcgcagtccaagagggatatagcccggcagcatttgaagaaagtcactgaacagttccca
gatgatgtggaggcttggattgaactggcccagatattggagcagaatgacttacaggga
tccctgaatgcatacagcactgctatgaagatcctgaaagagaaagtgaacgcggacatc
cctgcggagatattaaataacgtagcggccctacactaccggctaggcaatctacacgag
gccaaaacttacctcgaggaagcactagaaagagagaaagtagacgcggaaaccctagac
gcccagtattacaaatccatagctgtgacgaccacatacaacctggccaggctcaacgaa
gcgctgtgcatgtacaataaggctgagaaactgtttaaggacattctgaaagagcatccc
aattatattgattgttatttgaggttaggatgcatggcgcgcgacaaaggccagatctac
gaagcctccgactggttcaaggaagccctgaaggttaacacggagcacccggacacctgg
tcgctgctcgggaacctgcatctggcgcagcaggagtggggcccgggacagaagaagttc
gagaggatactacaaaactcttcgaacgccagcgacgcttactcgctgatagctttggga
aatgtatggctccaaacgctacaccaaccgtccagagaaaaagaccgagagaagcgtcat
caggagcgagctttagccatgtacaagcaagttctaaaggtcgacgtcaagaatatctgg
gccgctaacggtatcggctgcgttcttgcacataagggttgtgtgaacgaagctcgcgac
atattcgcccaagtgcgagaggccacagcggattttccggatgtttggatgaacatcgct
catatctatgtggaacagaaacaatacatcaacgctattcagatgtacgagaactgcatc
cgcaagttccgcatgcaccacgacgtggaatggcttacctggctcgcgcgcgcgcacggc
ctcgccggccgcccgcaggccgccagagctgctctgctacgagcgaggagagtcgcgccg
cacgacacggccctgttgtataatgcggcactcacgctgaggcggctcgcttcacatgtg
ttgaaagacgagaggagttcgttggatgtggtgttgagagcggtacatgagctacaagtc
tcccacaaatacttccaacgcctagcctcaacagagagcggcgaaggcgccgagcgagct
cgctacgaacccgcggccgccgccgccgaggctcggacatgcgccgacctgctctcccaa
gcgcagtggcatgttgccagagcgagacggcaacacgacgaggaggtcaccatgcgcgac
cgacagagagaacagagggagaacttcaggaagcaacaggaagaagagcgccgccgccgc
gaggagcaacaacagaaaagcaccgtcgagcaactacagaagagacaagagttcaaagag
aagaccaagaacgctatgctcttcgcagatatgccgctggaggagaagaggaaggggggc
agggggaggaggagggacgaatatgtgtctgattccggcagcggcagcgatcggcctaat
gaggagaaaaagaaaaagggggtaaaaaagaaaaggcttctaaaacggcggacgagaagc
tcagcaccaaacagcggctcaagatcgtctccaaggaaactatctccacgtccgagtccg
actcggacgcaggcagtcgccgctcgcgcagtcgcagtcgcagcggcagtcgcagtcgga
gcggcagtcgcaatcgcagtccgcccgctaaaggaggcaggaagaggattatgtccaaca
gcgatagtgacagatcacgttccaaaagccgttcgaaatcccgcagccgatctcgctccg
gctcagccaagagccggtcccggtcaaagagccgctcgcggtccaagtccggctcacgat
cgaagagccgctcccgttccaagagcaggtcccggtcgaagagcggttcaaggtcgaaga
gcaggtcgaggtcgaagagcaggtcgaggtcgaagagtaggtcgaggtcgaagagcaggt
cgaggtcaaagagcaggtcgagatctaagagtcgctcgaggtccaagagtggatcaaggt
ccaagagtcggtctaagagccggtcgaggtcacggtcgaagagcggctcgaggtcacggt
caagatcaaaaagcaagtcgcgttcgaaatcgcgttcccgttccaagagtgggtcgggca
gcggctcgtcccgcgccgccacgcccgtctccaggaagtccgtgtcggccagcgacgacg
acaactagccgcactcctcactcctcgtgtcggccagcgacgacgacaactagccgcact
cctcactcctcgtgtcggccagcgacgacgacaactagccgcactcctcactcctcgtgt
cggccagcgacgacgacaactagccgcactcctcactcctcgtgtcggccagcgacgacg
acaactagccgcactcctcactcctcgtgtcggccagcgacgacgacaactagccgcact
cctcactcctcgtgtcggccagcgacgacgacaactagccgcactcctcactcctcgtgt
cggccagcgacgacgacaactagccgcactcctcactcctcgtgtcggccagcgacgacg
acaactagccgcactcctcactcctcgtgtcggccagcgacgacgacaactagccgcact
cctcactcctcgtgtcggccagcgacgacgacaactagccgcactcctcactcctcgtgt
cggccagcgacgacgacaactagccgcactcctcactcctcgtgtcggccagcgacgacg
acaactagccgcactcctcactcctcgtgtcgaccagcgacgacgacaactagccgcact
cctcactcctcgtgtcgaccagcgacgacgacaactagccgcactcctcactcctcgtgt
cggccagcgacgacgacaactagccgcactcctcactcctcgtgtcggccagcgacgacg
acaactagccgcactcctcactcctcgtgtcggccagcgacgacgacaactagccgcact
cctcactcgtgtcggccagcgacgacgacaactagccgcactcctcactcgtgtcggcca
gcgacgacacgaggggggtgtgtatgtcccgtaaaagcaagagtataa
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