Cydia strobilella (spruce-seed moth): 134744960
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Entry
134744960 CDS
T10503
Name
(RefSeq) SR-related and CTD-associated factor 4
KO
K13191
RNA-binding protein 16
Organism
cstb Cydia strobilella (spruce-seed moth)
Brite
Transcription machinery [BR:
cstb03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
134744960
Spliceosome [BR:
cstb03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA binding proteins (RBPs)
134744960
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Other DBs
NCBI-GeneID:
134744960
NCBI-ProteinID:
XP_063534977
LinkDB
All DBs
Position
10:complement(17526478..17554271)
Genome browser
AA seq
1653 aa
AA seq
DB search
MDMPEVKAFNAELSGLYDNKPPISKAKMSAITRGAIKAIKFYKHVVHSVEKFIQKCKPEY
KVPGLYVIDSIVRQSRHQFGQDKDVFAPRFAKNMQQTFANLFRCPPENKGNIIRVLNLWQ
KNNVFGPEVIQPLMDMADPNHPLHQEIQQQQNNTANGSSLTLNTSHNSDKKISPVPAPLH
TPPDNSPMGDSFQDQPSGNQGVKFNRKLLSNDFEYESDDDGGHDTHTSHATHSTHSTHAS
HSTHTQPQQTADTLPLGSILTNPEIMRQLQSLQAQMQLMTGMSGMQIPNLMPMMSELQQN
QNQPFLNKEQQKQNESKDDMVESDIEFVETGPQVIEIPDANDSRSPSPRRRHRSRSRSRG
GRRRRTRSRSRSSRSPRRRRDKERDRERDRDRTKDNKSHKEREADKEKQREREKKGLPPI
KKENLSVCSTTLWVGHLSKLATQEELSDLFGAVGGVTSIDVVAPRGCAFVVMERRRDAHK
ALTTLNKHKLHSKEIAVAWAPGKGVKGREWKDYWEAELGVSYLPWGALQQRWALGALSLD
ALEDGGAVDEETLPPWLPPRVSGRTTGRRSWACRTCRGARCSSAGRSGRCRWTRWRTAAP
WTKRRCRRGCLPGDAAAVAASQGKWKDYWEAELGVSYLPWGALQQRWALGALSLDALEDG
VEGLLGGGAGRVVPAVGRAAAALGARGAVAGRAGGRRRRGRRDAAAVAASQGKWKDYWEA
ELGVSYLPWGALQQRWALGALSLDALEDGGAVDEETLPPWLPPRILPKTLMDGMVGMMPM
GMPGPAGMPPMPNAMPNPLQNAMPNAMQNAMPNAMPGPMPGMPALQLPPPGMGPGLPPGM
PPGMPPGLRPPNMPQQVPGMQPEAGMPPTSALLRFPGMPPQPIQSMQSMPQPGMAALPGF
LGGLLAVGGLVGGVPLHHAPPQHQQMQQRVSEVTRTDDAMDLDTEDTHNEEVSSEQPPPL
SDQLQALLSKPPPGFNSSEPPPPFNLSEPPPTAPNTEDKQDDKRDRDRRDRDRDRRDRGD
RDRRDRERGNRDRERGGRDRDRDRGDRDRERDRDRGGRDRRDRDRDRDNRDRFNAPRDNN
NREQSRSKSPREGGAGGEKSLQERLWEMANGKRDEFPQPQQQDNIGPEENRVDRPPLDRM
PRPGMDGEGDAADDWRRVEGPHAPPFRPDPRMRGPRPPVRGPWMEQGPGGPGGPGGQGPP
FGARFNGLGPPPGFPGPGPGPGPRFERPPFARMPFDGPARPPFDGGRPPFDGPRPPFDGP
RPPFDGPRFDGPRAPFDGPRPPFDGNRPPFDGPRPPFDGPRPPFDGPRPPFDGPRPFDGP
FDGERPFDGPPEFFNNRRFEDREFNDRGWNGDRERGDRDWNDRRTDWDDRRRDRFRDKDN
EDRSGQDRFDRNRNDRRRNFDDRNDRDRDRSDRDRSDRDKSDRDKSDRDRPKREERSRAD
RQKDRKSRWGAAEELKEGETSTEAAEAPKESTEAPKEVSTEQPEQMDIRSNQEQNVETKE
PARNQRVESKEQASECAPMETESTIDTHQEREPVEIETKQYEEAPESQSFDDSQQAEEPA
NREETRESYEERVEVPMDEPREETRTFEAAPVSEVTETPDLYDANDAVDTSFSIAPEKNE
TEDRIESTETENRIVSTEESKSEDIFEPSKGEP
NT seq
4962 nt
NT seq
+upstream
nt +downstream
nt
atggatatgccagaagtgaaggcgttcaacgcggagttatccgggttgtacgacaacaag
cctccgatctcgaaggcaaagatgagtgctatcacaaggggtgctattaaggctataaag
ttctacaagcacgtcgtacatagtgtagaaaagttcattcaaaagtgcaagccagagtat
aaagtgcctggtttatacgtgatagattcgatagtacggcagtcgcgacaccaatttggg
caggataaagatgtgttcgcgccgcggttcgctaagaacatgcagcagaccttcgcgaac
ctgttcagatgccctcctgaaaataagggtaacatcatccgagtgctaaacctgtggcag
aagaacaatgtgtttggtccggaggtgatccagccgctgatggatatggcggatcctaac
cacccgctgcaccaggagatccagcaacaacagaataacactgctaatgggagcagtcta
acactgaacaccagccacaactcggacaagaagatatccccagtaccggctccgctacac
actcctccggacaactctcctatgggtgattctttccaggaccaaccgtcaggcaaccaa
ggcgtcaagttcaaccgcaaactcctttccaacgactttgaatacgagagtgatgacgac
ggcggacacgacacgcacacgtcgcacgctacacactccacacactccacacatgcgtcg
cattcgacacatacccagccgcagcagaccgctgacacattgccattgggaagtatactg
acgaatcctgagataatgcggcagctacagagccttcaggcgcaaatgcaactcatgact
ggaatgtcgggaatgcagatacctaatttaatgccaatgatgtcagaactacagcagaat
caaaaccaaccgtttttgaacaaagaacagcagaaacagaacgagtccaaagatgacatg
gtggaatctgacatcgagtttgtagagacagggccgcaggttattgaaatacctgacgct
aatgactccaggagtccgtctccgcggaggaggcatcgctctcgctcacgctcgcgcggc
ggccggcgccggcgcactcgctctcgctctcgctccagtcgctcgccgcggcggaggcga
gacaaggaacgggacagagaacgggatcgtgatagaactaaggataataagagtcacaaa
gagagggaagctgacaaagagaagcaaagggaacgggagaagaaagggttaccaccaata
aagaaggagaatttaagtgtatgcagcacaacactgtgggtaggccacttgtcgaagctg
gccactcaggaggagctgtcggacctgttcggcgccgtgggcggcgtgacctccatcgac
gtggtggcgccccgcggctgcgccttcgtggtcatggagcgccgccgcgacgcgcacaag
gccctcactacgctcaacaaacataagctgcactctaaagaaattgccgtggcgtgggcg
cccggcaaaggcgtgaaggggcgcgagtggaaggactactgggaggcggagctgggcgtg
tcgtacctgccgtggggcgcgctgcagcagcgctgggcgctcggggcgctgtcgctggac
gcgctggaggacggcggcgccgtggacgaagagacgctgccgccgtggctgcctcccagg
gtaagtggaaggactactgggaggcggagctgggcgtgtcgtacctgccgtggggcgcgc
tgcagcagcgctgggcgctcggggcgctgtcgctggacgcgctggaggacggcggcgccg
tggacgaagagacgctgccgccgtggctgcctcccaggagacgctgccgccgtggctgcc
tcccagggtaagtggaaggactactgggaggcggagctgggcgtgtcgtacctgccgtgg
ggcgcgctgcagcagcgctgggcgctcggggcgctgtcgctggacgcgctggaggacggc
gtggaaggactactgggaggcggagctgggcgtgtcgtacctgccgtggggcgcgctgca
gcagcgctgggcgctcggggcgctgtcgctggacgcgctggaggacggcggcgccgtgga
cgaagagacgctgccgccgtggctgcctcccagggtaagtggaaggactactgggaggcg
gagctgggcgtgtcgtacctgccgtggggcgcgctgcagcagcgctgggcgctcggggcg
ctgtcgctggacgcgctggaggacggcggcgccgtggacgaagagacgctgccgccgtgg
ctgcctcccaggatcctacccaagaccctaatggacggcatggtcggcatgatgcccatg
ggcatgcccggcccggccggcatgccccccatgcccaatgccatgcccaacccgttgcag
aacgcaatgcccaacgcgatgcagaatgccatgcccaatgcaatgcctggaccaatgcca
ggcatgcctgcgttgcagttaccaccacctggcatgggtccgggtctgccccccggcatg
ccgccgggcatgccccccggcttgcggccgccgaacatgccgcaacaagttcctggtatg
caacctgaagcgggtatgccgccgaccagcgcactcttgagattcccgggaatgccacca
cagccgatacagtccatgcaatctatgccacaaccgggcatggcggcgctgccgggcttc
ctgggcgggctgctggccgtgggcgggctggtggggggggtgccgctgcatcatgcaccg
ccacagcatcaacagatgcagcaaagggtgtcggaggtgacgagaaccgacgacgcgatg
gacctggatacagaggatactcataacgaggaagtgtccagtgaacaaccccccccgcta
tcagaccagctccaagctctactctcaaaaccaccgcccggcttcaattcctctgaacct
ccccccccattcaacctatccgagcctccccccacagcgccaaacacagaagacaaacaa
gacgacaagcgggaccgggaccgccgggaccgcgaccgggatcgccgggaccgaggcgac
cgggatagaagagaccgggaacggggcaatagggacagggaaagaggcgggcgggatcgt
gatcgggacagaggcgatcgtgaccgcgaacgtgaccgtgaccgcggcgggcgggaccgg
cgcgaccgggaccgggaccgcgacaaccgggaccggtttaatgcgccgagggataacaat
aatagagaacagagccggtccaagtccccgcgcgagggaggggcggggggtgaaaagtcg
ttgcaggaacgattatgggagatggccaatggcaaacgtgacgagttcccgcagccgcaa
caacaagataacataggtcctgaagagaacagggttgaccggccgcctctggatcgaatg
ccacgaccaggaatggacggtgagggcgacgcggccgacgactggcgccgcgtcgaggga
ccgcacgcgccgcccttcaggcccgatccgagaatgcgaggaccccgaccgcctgtaaga
gggccatggatggagcaaggtccgggcgggcctggaggccccgggggtcagggtccgccg
ttcggtgcgcggttcaacgggctcggccccccgcccggcttccccggccccggccccggc
cccggcccgcgcttcgagcgcccgcccttcgcgcgcatgccgttcgacggccccgcccgg
cccccgttcgacggcggccggcctccgttcgacggccccaggcctccattcgatggtccg
cgcccgccgtttgacggcccgaggttcgacggcccccgagcgccgtttgacggtccgcgc
ccgcccttcgacggtaacaggcctcctttcgacggcccgcgaccaccattcgacggcccg
cgaccacctttcgacggcccgcgaccacctttcgacggcccgcgcccgtttgacggaccg
ttcgacggtgaacgtccgttcgacggtccaccggagttctttaacaacagacgcttcgag
gaccgagagttcaacgaccggggctggaacggggaccgcgagcgcggcgaccgcgactgg
aacgatcgcaggaccgactgggacgaccgccggagggacaggttccgggacaaggacaac
gaggacaggtcaggacaggacaggttcgacaggaacaggaacgacaggaggaggaacttt
gacgataggaacgatcgggaccgggaccgtagtgaccgtgaccgcagtgaccgtgacaag
agtgatcgcgacaagagtgaccgcgaccgtcctaagagggaggagcgctcgcgtgccgat
cggcagaaagataggaaatctagatggggcgcagcggaagaattaaaggagggtgagact
tctacagaggccgcggaggctcctaaagagagcactgaagcgcctaaagaggttagcacg
gagcaacctgaacaaatggatattcggtctaatcaggaacaaaacgtggaaactaaagaa
ccagcaaggaatcaaagagtggaatctaaagaacaagcgagtgagtgtgcgccgatggaa
actgagagtacaatagatacgcatcaggaaagagaaccagtagaaatagagacaaagcaa
tatgaagaagctcctgagtcgcagagctttgatgatagtcagcaagcggaagaacctgca
aacagggaagagactcgagaaagttatgaggaaagggtagaggttccaatggacgaaccg
agagaagaaacgagaacgtttgaagctgcaccagtgagtgaagtcactgaaacgccagat
ttatatgacgcaaatgacgcagtagacaccagcttctcaatagcaccggaaaagaacgaa
acagaggacagaatagaatctacagagacagagaatagaatagtgtctacagaagagtcc
aaaagtgaggacattttcgagccatctaaaggagagccttga
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