Cydia strobilella (spruce-seed moth): 134745433
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Entry
134745433 CDS
T10503
Name
(RefSeq) mismatch repair endonuclease PMS2
KO
K10858
DNA mismatch repair protein PMS2
Organism
cstb Cydia strobilella (spruce-seed moth)
Pathway
cstb03430
Mismatch repair
cstb03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
cstb00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
134745433
03460 Fanconi anemia pathway
134745433
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cstb03400
]
134745433
DNA repair and recombination proteins [BR:
cstb03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
MutL homologs
134745433
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MutL_C
DNA_mis_repair
HATPase_c_3
HATPase_c
Motif
Other DBs
NCBI-GeneID:
134745433
NCBI-ProteinID:
XP_063535537
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Position
11:complement(6837639..6842958)
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AA seq
878 aa
AA seq
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MDNHDDKKDTEKVTSIKPINVESVHKICSGQVVLSLAVAVKELVENSLDAGATNIDIRFK
NHGIDLIEVADNGSGVTEDNFAALTLKYHTSKLNEYSDLLGVSSFGFRGEALSSLCALAN
LIIVTRHKSSEHATKLEYDHKGNIVKKTLCSRQVGTTVSLSNLFASLPVRQKEFHKNAKR
EFNKMTQLLYAYCLISLGVKITCTNQTSSNSKTSVVATQGSVSYKDNIACVFGTKQLQSI
LEIKPEQVSNIKDNIFKGLSGNVKESEDSVVLEDVEIDLSEESNDADQSCVENSQEARTF
SQKSQGYKNVSDPVEFTGFISSCAHGSGRSSTDRQFFYVNSRPCEPTKIMKVINETYRQY
NPHQYPFLFLNITLDRTSVDVNVTPDKRKLFLTKEKIILDVMKASLLKLFEAIPRTLKIE
PNANLYSQKTDNVKPETDQPRIFNSFIQRFSKNPVSTSQSENRSRAETRQVDLKRKSTTM
LDFISSKTTKLNDDEDELHEDSKSESIKIEASDSDNSVEEHNETVKNETTIDDSVETLNE
TNNADPSNETNELSPSSENVTENIMYLEDSDNVPNTQIRKLTDVVVEKSHTYHCNNKDLQ
KKNSLNLEQKGKQNKSKIVVTDKEDLGKCNRKTVIMKTSLAHVKALAEMNSKQTNTTAPE
RIKFKTTINPVFNKKCEEELSKEISQDSFKKMIVVGQFNLGFIITQSEDDLFIIDQHATD
EIYNFETLQKTTELTSQKLVIPQQLELTGVNEQILMDNLDIFKKNGFTFEINEDALPTKR
VKLLTIPMSKNWIFGKEDIEELLFMLRESSSEYCRPSRVRAMFASRACRKSVMIGTALSK
ADMKVLVDHMAEIDNPWNCPHGRPTIRHLVNLAMVHKS
NT seq
2637 nt
NT seq
+upstream
nt +downstream
nt
atggataatcatgacgataagaaggacactgaaaaggttacatccataaagcccattaat
gtagaatctgtgcacaagatatgctccggtcaagtagtgcttagtttagcggtagcagta
aaagaactagtcgaaaactcgctagatgctggggccacaaatatagacatacgatttaaa
aatcatggaatagatctgatagaggtggctgataatgggtctggtgttaccgaagataat
tttgcagcattaactttaaaataccacacttccaaactaaacgagtactcagatctactg
ggagtgtctagctttgggtttagaggagaggcattaagttctctatgtgcgctggcaaac
ctcatcattgtcaccaggcacaagagttctgagcatgcaacaaagttggagtatgatcat
aaaggaaatattgtaaagaagactttatgttcgcggcaagttggaaccacagtcagttta
tcaaatttatttgcttcactaccagtcaggcagaaagagtttcataagaatgccaagagg
gaattcaataaaatgactcagctgctatatgcatattgccttatatcattgggagtcaaa
atcacatgcactaaccaaacaagttccaactctaagacttcagtggtggccacacaggga
tcagtttcctacaaagacaacatagcttgtgtatttggcacaaaacaattgcaatccatc
ctagaaatcaagcctgagcaggtttcaaatatcaaggataatatttttaaagggctctca
gggaatgttaaggagagtgaagactctgttgtacttgaagatgttgagatagacttgtca
gaagagtctaatgatgctgatcaatcatgtgttgagaactcacaagaagctaggaccttc
tctcaaaaatcacagggctataaaaatgtaagtgatcctgtagaattcacaggtttcata
tcatcatgtgctcacggtagtggccgctctagcacagacagacagtttttctatgtcaat
tcaagaccctgtgaaccaacaaaaataatgaaagttatcaatgaaacttacagacagtac
aatccacaccagtatcctttcctgtttttaaacatcaccttagatagaacatctgttgat
gtaaatgtaacaccagacaaaagaaaactattccttactaaagagaaaattatattagat
gttatgaaggcatcattattaaaactttttgaagctatacctaggaccttaaaaatagaa
ccaaatgctaatctttacagtcaaaaaactgataatgttaagccagaaacagatcagcct
agaattttcaactctttcattcagcgtttttctaagaatcctgtatcaacatctcaatca
gaaaatagaagcagggcagaaacaagacaagtagatttgaaaaggaaatcaaccacaatg
ttggactttatatcttccaaaacaaccaaattgaatgatgatgaggatgaactacatgag
gattctaaatctgaaagtattaaaatagaagcatcagattctgataactcagtagaagaa
cataatgaaacagtgaaaaatgaaactaccattgatgattcagtagaaacactaaatgaa
acaaataacgcagatccatcaaatgaaactaatgaattaagtccatcatctgaaaatgta
acagaaaacatcatgtatttagaggactctgataatgtcccaaatactcaaattagaaag
ttaactgatgttgtggttgaaaaatcacacacatatcattgcaataataaagacttgcag
aaaaagaatagcctgaaccttgaacaaaaaggcaaacaaaataaatcaaaaattgtagta
acagataaggaagacttaggtaaatgtaacagaaaaactgtgattatgaaaacatctcta
gctcacgtaaaagcattagcagaaatgaatagtaaacaaactaatacgactgcaccagaa
agaataaaatttaaaactactataaaccctgtatttaataaaaaatgtgaagaagaactc
agtaaagaaatatctcaagattcattcaaaaagatgattgttgtaggtcaattcaactta
ggatttataatcacccaatcagaagatgatctgtttattatagatcagcatgctactgat
gagatttataattttgaaacattacagaaaactacagagctaacaagtcaaaaactagtc
ataccgcagcaacttgaactcacgggtgtcaacgaacaaatactaatggacaacttagac
attttcaaaaagaatggattcacgtttgaaataaatgaagatgcccttccaaccaaaagg
gttaaactcttgactattcctatgtcgaaaaattggatatttgggaaggaagatatcgaa
gagttactatttatgctaagggaatcgtcatcagaatactgtaggccaagcagagtaagg
gcgatgttcgcttctagagcgtgccgcaaatcagtcatgataggcacggccttgagcaaa
gccgatatgaaagtactggtagaccacatggcagaaattgacaacccctggaactgtcct
catggccgacctaccattcgacacttggtgaatttagctatggtgcataaaagctaa
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