Cydia strobilella (spruce-seed moth): 134745441
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Entry
134745441 CDS
T10503
Name
(RefSeq) splicing factor 3B subunit 3 isoform X1
KO
K12830
splicing factor 3B subunit 3
Organism
cstb Cydia strobilella (spruce-seed moth)
Pathway
cstb03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
cstb00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
134745441
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cstb03021
]
134745441
03041 Spliceosome [BR:
cstb03041
]
134745441
03036 Chromosome and associated proteins [BR:
cstb03036
]
134745441
Transcription machinery [BR:
cstb03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
SAGA/TFTC/STAGA complex
134745441
Spliceosome [BR:
cstb03041
]
Complex A
U2 snRNP components
U2 snRNP specific factors
134745441
Complex B
134745441
Complex C
U2 SnRNP specific factors
134745441
Chromosome and associated proteins [BR:
cstb03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
STAGA complex
134745441
TFTC complex
134745441
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-prop_RSE1_1st
Beta-prop_RSE1_2nd
CPSF_A
Fungal_virus_P2_N
Motif
Other DBs
NCBI-GeneID:
134745441
NCBI-ProteinID:
XP_063535547
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All DBs
Position
11:6735540..6745345
Genome browser
AA seq
1220 aa
AA seq
DB search
MYLYNLTLQGSTAITHAVHGNFSGTKQQEIVISRGKILELLRPDPNTGKVHTLLKVEIFG
IIRSMMSFRLTGGTKDYIVIGSDSGRIVILEYIPAKNILEKVHQETFGKSGCRRIVPGQY
LAIDPKGRAVMIGAIEKQKLVYILNRDAEARLTISSPLEAHKSNTLVYHMVGVDVGFENP
MFACLEIDYEEADSDPTGEAAQKTQQTLTFYELDLGLNHVVRKYSEPLEEHANFLITVPG
GNDGPSGVLICSENYLTYKNLGDQHDIRCPIPRRRNDLDDPERGMIFVCSATHKTKSMFF
FLAQTEQGDIFKITIETDDDMVTEIKLKYFDTVPVATSMCVLKTGFLFVACEFGNHYLYQ
IAHLGDEDDEPEFSSAMPLEEGDTFFFAPRPLRNLVLVDELDSLSPILACHVADLAGEDT
PQVYLACGRGPRSSLRALRHGLEVAEMAVSELPGSPNAVWTVRRHKDEEYDSYIIVSFVN
ATLVLSIGETVEEVTDSGFLGTTPTLSCHALGNDALVQVYPDGIRHIRADKRVNEWKAPG
KKTIVKCAVNQRQVVIALTGGELVYFEMDPTGQLNEYTERKKLSSDVSCMALGSVATGEQ
RAWFLAVGLNDNTVRIISLDPSDCLAPRSMQALPAGAESLCIVEQPFESGAKSALHLNIG
LSNGVLLRTTLDSVSGDLADTRTRYLGSRPVKLFKVRVQAAEAVLAVSSRTWLGYHYQNR
FHLTPLSYECLEYAAGFSSEQCAEGIVAISSNTLRILALEKLGAVFNQTYLPLEYTPRKF
VINSDNNQIIILETDHNSYTEEMKKQRRVQMAQEMREAAAGGGPEEQTLANEMADAFLSD
VLPENVFSSPKAGAGMWASQIRVVDMGSGGAAPGTVSRLPLEQNEAAVSLCVVRWGAHAE
QAQAQAHLVVGVAKDLVLSPRACSEGSLHVYKMYAATGKLELVHKTPVDEYPGALAAFNG
KLLVGVGRMLRLYDIGRRKLLRKCENRHIPNLIADIKTIGQRIFVCDVQESVFCVKYKKR
ENQLIIFADDTNPRWITSSCLLDYDTIAMSDKFGNVAVVRLPQSVSDDVDEDPTGNKALW
DRGLLNGASQKGEIVVNFHVGETVTSLQRATLIPGGSEALLYATISGSLGVLLPFTSRED
HDFFQHLEMHMRSENSPICGRDHLSFRSYYYPVKNVIDGDLCEQFNSLEPAKQKAIAGDL
ERTPAEVSKKLEDIRTRYAF
NT seq
3663 nt
NT seq
+upstream
nt +downstream
nt
atgtatttgtacaatttgactctacaaggctctacagccattacccatgcggttcatggc
aatttctccgggacgaagcagcaagaaatagtaatatctcgcgggaagatcttggaattg
ttacgacctgatcccaacaccggcaaagtgcatacactgctgaaagtggagattttcggt
attatccgttcgatgatgtcatttcggcttactggcggcactaaagattacattgtcatt
ggatccgactctgggcgtattgtcatcctggaatatattccagctaaaaacatccttgaa
aaagttcaccaagaaacctttggcaaatctggatgtcgcagaatagtacccggacagtac
ttggctattgatccaaaaggcagagctgttatgatcggagccattgaaaagcagaaactg
gtgtacatattgaacagagatgctgaagcgaggttgaccatctcttctccattggaagcg
cacaagtccaacacactggtgtatcatatggttggagtggacgtgggctttgagaatccc
atgtttgcttgccttgagattgattatgaagaagctgactctgaccctacaggtgaagcg
gcacaaaaaactcagcagacattaacattctatgaattggatttaggccttaaccatgtc
gtaagaaaatactctgagcctttagaggagcatgctaactttcttatcacagtacccggt
gggaatgatggaccctctggagtactcatttgctctgagaactacttaacatacaagaat
ttaggagaccaacatgacattcgctgccctattcctcgccgccgtaatgatttggatgac
cctgagagaggcatgatctttgtatgttcagccacacacaagactaaatcaatgttcttc
tttttggcacaaactgagcaaggagacattttcaagataaccattgaaacggatgatgat
atggtgacagaaatcaaactgaaatactttgacactgttccagtagccacttctatgtgt
gtcttgaaaaccggattcctctttgtggcctgtgaatttggcaaccattacttgtaccag
atagctcacttgggtgacgaggatgatgagccagagttcagttcagccatgcccttggaa
gaaggagacacatttttctttgccccaaggcccctccgaaacttagtgcttgtggatgag
ctggattcactctctcctatattagcatgtcatgtagctgatttggccggggaagacacg
cctcaagtatacttggcatgtggtcgtggacccaggtcatccctgagagccttaaggcat
ggtttggaagtggcagaaatggctgtgtctgagcttccaggatctcctaatgcagtatgg
acagtcaggagacataaagatgaggaatatgattcgtacatcatagtgtcattcgtgaac
gccacactggtgctctctattggcgagacggtcgaggaagtgacggactcgggcttctta
ggcacgacgccgaccctgagctgccacgcgctcggaaacgacgccctggtgcaagtgtac
ccggatggcatccggcatattcgcgccgacaaacgtgtcaatgaatggaaggctcctggc
aaaaagactatcgtaaaatgcgcagtgaaccagagacaagtagtcattgctctcactggt
ggtgaactggtctattttgagatggatccgactggtcaattaaatgagtacacagaaaga
aaaaagttgtcatcagatgtgtcatgtatggctttgggctctgtagcgactggagagcaa
agagcttggttcttagcagtagggctcaatgacaacactgtcagaatcatctccttggac
ccatcggactgtttggcaccaaggtcaatgcaagcgttacctgctggcgccgagtcactg
tgcatagtggaacaaccgtttgaatctggtgcaaaatctgctttacatctcaacattggt
ttaagcaatggtgtgttactgagaacaacactggactctgtcagtggagatctagcagac
acaagaacaaggtacctgggctcaaggccagttaagctatttaaagtgagagtacaagca
gccgaggcagtacttgccgtgtcatcgaggacctggcttggatatcattaccagaaccgt
ttccacctgacgccactctcttacgaatgtcttgaatatgctgcaggtttcagttcagag
caatgcgcggaaggtattgtagcgatctcatccaatactttgagaattttggcactcgaa
aagttgggagctgttttcaatcaaacttatctgccactagaatacacgccgagaaaattt
gtcatcaacagtgacaacaatcaaattattattttagagactgatcacaattcatacaca
gaagaaatgaaaaaacaaagaagggttcagatggctcaagaaatgcgtgaagcggcggcc
ggcggaggccccgaggagcagactctcgctaacgaaatggccgacgcgttcctctccgac
gtgctacctgaaaacgttttctcgtcccccaaagccggcgcaggtatgtgggcgtctcag
atccgcgtggtggacatggggagcggcggcgcggcgccgggcacggtgtcgcggctgccg
ctggagcagaacgaggcggccgtgtcgctgtgcgtggtgcgctggggtgcgcacgccgag
caagcgcaagcgcaggcgcacctcgtggtgggcgtggccaaggatctcgtgctctcgccg
cgcgcctgctcggagggcagtctgcacgtgtacaagatgtacgccgccaccggcaagctg
gagctcgtgcacaagacgcccgtcgacgagtacccgggcgccctagccgccttcaacggc
aagctgctcgtcggggtcggccgcatgctccgcctgtacgacatcggccgcaggaagctc
ctccgcaagtgcgagaaccgacacattcccaatctcatagcggacatcaagacgatcggt
cagagaatcttcgtctgcgacgtccaggagtctgtattttgtgtaaagtacaagaagcgg
gagaatcagctgatcatattcgccgatgacacgaacccgcggtggatcaccagcagctgc
ctgctggattacgacactatcgcgatgtcggacaagttcggcaacgtcgccgtcgtcagg
ctgccgcagtccgtgtcggatgacgttgacgaggaccccacgggaaataaagctctttgg
gacagaggtctactaaacggagcatctcaaaagggagagatagtcgttaatttccatgtg
ggtgaaactgtaacgtcgctgcagcgagcaacgctgatccctggcgggtcggaggcgctg
ctgtacgcgaccatcagcggctcgttaggagtgctgctgcccttcacctcgcgggaagac
cacgacttcttccagcacctcgagatgcacatgcgaagtgaaaactcgcccatttgcgga
cgggatcatctctcctttagaagttattattacccagttaagaatgtgatagacggtgac
ctttgcgagcagttcaactcgctggagcctgcgaaacaaaaggcgattgcgggtgacctg
gagcgaacgcccgccgaagtctccaagaaactagaagatatcaggactagatacgcgttt
taa
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