Cydia strobilella (spruce-seed moth): 134745446
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Entry
134745446 CDS
T10503
Name
(RefSeq) ATP-dependent RNA helicase p62
KO
K12823
ATP-dependent RNA helicase DDX5/DBP2 [EC:
5.6.2.7
]
Organism
cstb Cydia strobilella (spruce-seed moth)
Pathway
cstb03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
cstb00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
134745446
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
cstb03041
]
134745446
03009 Ribosome biogenesis [BR:
cstb03009
]
134745446
Enzymes [BR:
cstb01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
134745446
Spliceosome [BR:
cstb03041
]
Complex A
U1 snRNP components
U1 related factors
134745446
Complex B
134745446
Ribosome biogenesis [BR:
cstb03009
]
Eukaryotic type
Pre-60S particles
Helicases
134745446
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Cas3-like_C_2
AAA_30
ERCC3_RAD25_C
Motif
Other DBs
NCBI-GeneID:
134745446
NCBI-ProteinID:
XP_063535559
LinkDB
All DBs
Position
11:complement(8022593..8027728)
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AA seq
545 aa
AA seq
DB search
MSGNWSNSRGGNGGSKYGSGGGSKFGGGGGGGSRFGGGGGGGFGGGGKKDFTGGQNMRRP
NWDTMTLQPFNKNFYNPHPTVLGRSPYEVEEYRGQHEITVSGLDVPIPIQRFEEGNFPDY
VMKGISGMGYKEPTPIQAQGWPIAMSGNNLVGIAQTGSGKTLAYILPAIVHINNQQPLRR
GDGPIALVLAPTRELAQQIQQVANDFGNASYVRNTCVFGGAPKREQARDLERGVEIVIAT
PGRLIDFLEKGTTNLQRCTYLVLDEADRMLDMGFEPQIRKIIEQIRPDRQTLMWSATWPK
EVKKLAEDYLGDYVQINIGSLQLSANHNILQIIDICQEHEKENKLNVLLQEIGQSQDPGA
KTIIFVETKRKVENITRNIRRYGWPAVCMHGDKTQQERDDVLYQFKQGRASILVATDVAA
RGLDVDGIKYVINFDYPNSSEDYIHRIGRTGRSKTKGTSYAFFTPSNSRQAKDLVSVLQE
ANQTISPQLQSMADRCGGGGGGWNNRSRFGGGRGGGGGGSFKRGTNFGRNGQGGGGGGHR
RFNDY
NT seq
1638 nt
NT seq
+upstream
nt +downstream
nt
atgtccggcaattggagcaatagccgtggtggaaacggcggttccaaatatgggtctggc
ggtggaagcaaatttggcggcggcggtgggggtggcagccgcttcggcggcggcggcggc
ggtggattcggaggcggcggcaagaaggacttcactggaggccagaacatgcgccgccct
aactgggacaccatgacgttgcagcctttcaacaagaacttctacaacccacacccgaca
gtccttggccggtccccttatgaagtagaagaatataggggtcagcatgaaataactgtg
agtggacttgatgtccctatccctatccaacgttttgaggagggcaatttcccagactat
gtaatgaagggaatcagtggtatgggctacaaagaaccaacacctatccaagctcaaggc
tggccgattgctatgtctggaaataacctggttggtatcgcccaaactggatctggaaag
accctggcttacattcttcctgctattgtgcatatcaacaaccaacagcccctcagacgt
ggtgatggacccattgctctggttctcgctccaacaagagagttggctcagcagattcaa
caagtagccaatgattttggaaatgcttcatatgtgcgtaacacttgcgtgtttggtggt
gctcctaagagagagcaagcgcgcgacttggagcgtggcgtggagattgttattgccaca
cctggcagactaattgatttcctagaaaagggaaccaccaaccttcaaagatgcacttac
ctggtcttggacgaagctgaccgcatgttagacatgggttttgaacctcagattagaaag
atcattgaacaaattcgcccagacagacagacccttatgtggtctgccacatggcctaaa
gaagtgaaaaagctggccgaggactatctcggagactatgttcagatcaacattggttca
ctccagctctctgctaatcataacattctacagatcatagatatatgccaggaacatgaa
aaggaaaacaaattgaatgtacttttacaagaaatcggacaaagtcaggaccctggcgcg
aaaaccattatttttgttgagaccaagaggaaagtcgagaatatcactagaaatattagg
cgctatggctggccagctgtgtgcatgcatggagataaaacacagcaagagagagacgat
gttttatatcagttcaagcaaggccgtgccagtattttagtagcaactgatgttgctgcc
agaggacttgatgttgatgggattaaatacgtaatcaactttgattaccccaactcttct
gaggactacattcatcggataggcagaactggccgttcaaagacgaaaggcacatcatat
gcctttttcacaccttccaactcgcgtcaagccaaggatctcgtttctgtactacaggaa
gccaatcagacaatcagtcctcaattgcaatctatggccgaccgctgtggaggcggtggc
ggtggatggaacaacaggagccggttcggaggtggccgcggtggtggcggcggtggctca
ttcaagcgcggtacaaacttcggtagaaacggacaaggaggcggtggcggtggccacaga
cggtttaatgactattaa
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