Cydia strobilella (spruce-seed moth): 134745462
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Entry
134745462 CDS
T10503
Name
(RefSeq) collagen alpha-1(XV) chain-like
KO
K06823
collagen type XVIII alpha
Organism
cstb Cydia strobilella (spruce-seed moth)
Brite
KEGG Orthology (KO) [BR:
cstb00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
cstb04147
]
134745462
00535 Proteoglycans [BR:
cstb00535
]
134745462
00536 Glycosaminoglycan binding proteins [BR:
cstb00536
]
134745462
Exosome [BR:
cstb04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
134745462
Proteoglycans [BR:
cstb00535
]
Extracellular matrix (ECM) proteoglycans
Basement membrane proteoglycans
134745462
Glycosaminoglycan binding proteins [BR:
cstb00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
134745462
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Endostatin
Collagen
Collagen_trimer
Motif
Other DBs
NCBI-GeneID:
134745462
NCBI-ProteinID:
XP_063535577
LinkDB
All DBs
Position
11:6107233..6310667
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AA seq
1173 aa
AA seq
DB search
MAMFWCRTLPIALLSALTAANDGLFGSSKYPNEVPEYDLLHAIGVPFSNPKTQYFDEGLD
GFPAYGLKPGSDIKSPYRLFMPEKLYPEFSITATVRPATENGGFLFSVVNPLETVVQLGV
QLIPSGRDLTNISLLYTDANVYALSQTIVSFAIPSFSKKWSRFGLKVTTENVTLYLNCHE
FDTVPVKRNPLELVFDSASTLYVGQAGPLIRGAFHGAFQELKLYGSPTQAEVQCVNTFEE
MGKGSGADEIDIDNFLVDQEEGDAEGSGRFGTMPPFPPPPPGLDGYSMAVRGEKGERGPR
GIPGESIRGPPGPPGPPGPPGPPGTTAIAEISGSGDDRNTVKQIFGENYVSLGQCGCNSS
TILSLLETAPELQGPPGPPGLVGADGRSGPPGIGGQPGMPGERGPVGPRGEKGDRGDSGP
RGPEGQPGPKGEPGVDGRTGSPGPPGPPGPPSASDYSNFDESLLGSYGGAIGRPGAPGPK
GDGGQMGPTGPQGERGFAGPKGERGQPGLNGPKGDRGHLGPQGDRGLKGDRGNPGLDGRP
GIPGVNGRPAEKGEKGERGSPGPPGPAVAGGYVPDSAESLISGPKADKGDKGEKGSLGND
GAAGFPGKDGKPGERGDIGPSGLPGGMGPPGAPGLKGERGERGPPGPISITSSGSDIITV
KGEKGDAGPRGRRGRPGANGPRGLQGIQGLPGPPGRPGDKGDTGFPGWVGRTGSSGKPGL
PGSVGPKGDKGEPGESLLDISTLKGEKGDRGYDGAQGAMGPPGPPGPRSEPVQYIPGPPG
PPGPPGPPGVSLIGPKGEPGMSVYEEHPIHGNTKFFGRPPVKASALDELKALRELKDLKE
KDRHRDAQPVYGASNQRTEEASTGQTVPGAAVFQTTEEMMRLASASPVGALAYVTEEQAL
FVKVNSGWQYVLLGSLVTQSPQAQATSAPAPLPMPAASLVHEAPLSNSIHSSPDVPDGPR
LRMAALSDPMSGNMHGVRRADYACYRQARRAGLRGTFRAFLTSRSTNLDATVRFADNHLP
VVNTRGDVIFKSFASIFDGNGGIMAGASRIYSFDGKNLMTDPHWPHKIIWHGSHASGERA
LDAFCDEWTSHDPHRSGLAASLYSHKLLSQERYSCNNHFIVLCVEVSSKTIRNKRETPRF
NMTNLLDDEDYLYNAEEYQQLLNEIFAQPFREN
NT seq
3522 nt
NT seq
+upstream
nt +downstream
nt
atggcgatgttttggtgtcgaacgctaccgatcgctcttctttcggcgctcacggcggct
aacgatggattgttcggttcctctaaatatcccaacgaagtaccggaatatgacttactc
catgcgatcggcgttcccttcagcaaccctaagacacaatacttcgacgagggcctggac
ggattcccagcgtacggccttaaacccggctccgacatcaaatcaccctaccgcctcttc
atgcccgaaaaactgtaccctgaattctccataacagccacagtccgacccgccaccgag
aacggcggctttctattctctgtcgtaaatcctttagagacggtagtacaattgggagta
cagttgatcccgtcggggagagatctcacaaatatatcccttttatacaccgatgcaaat
gtctatgccctctcgcagacaattgtatcgttcgctataccatctttttctaagaaatgg
agtcggttcggattgaaggttactacggagaatgtgacgttgtatctgaattgtcacgag
tttgataccgtgcctgtgaagaggaatccgttggagttggtattcgattcggcgtctacg
ttgtacgtggggcaggcagggccgcttatccgaggtgcttttcacggtgcgtttcaagaa
ctgaagttgtacggatccccgacacaggctgaagtgcaatgtgtcaacacgttcgaggaa
atgggtaaaggcagcggtgcagacgagattgacattgacaattttttggtggaccaagaa
gaaggagacgcggaaggctcaggccgcttcgggacgatgcctcctttcccgcccccgccc
ccaggactagacggttattcaatggcagttagaggtgaaaaaggcgaacgaggaccaagg
ggtatacccggggagtccatccggggccctccaggccccccggggccgccgggacctccg
ggcccgccggggaccaccgccatcgctgagatctcaggctcaggtgacgataggaatacg
gtaaagcaaatcttcggtgagaactacgtatcactcggccagtgtggatgtaactcctcg
acgattctgtctctgttagaaactgcgcctgagctgcagggcccgccaggtccacctggt
ttggtcggtgctgatggacgctccggcccgccaggtatagggggtcaaccaggaatgccc
ggtgagcggggaccagttggaccaaggggagaaaagggcgacaggggagattcaggccct
cgcgggccagagggccagccggggcctaaaggagaacctggggtggatgggagaacaggc
agccccggtccccccggccctcctgggccccctagtgcttccgattacagtaactttgat
gaatccctcctcggttcctacgggggagccattggtcgaccaggtgctccgggccctaaa
ggcgacggtggccagatggggccaacggggccacaaggagagcgtggcttcgcagggcca
aagggagaacgaggacagccggggctgaatggaccaaagggcgatcggggtcacctaggg
ccacaaggcgatcgcgggctcaagggtgaccgaggcaaccctggactcgacggcaggccc
gggataccaggagtcaatggaaggccggcagagaagggcgaaaaaggtgaacgcggatct
cccggacccccaggccccgctgtggcaggcggatatgttcctgatagcgcggaatcttta
atttctggaccaaaagctgacaaaggagataagggtgaaaagggcagtctaggcaacgat
ggagccgctggcttcccaggaaaggatgggaaacccggagaacgcggggacatcggacca
tcgggtttgccaggcggaatgggtcctccgggtgcgccaggacttaagggggagaggggg
gagcgcgggccacctggacctatcagcatcacatcttctggatcggacataattactgtc
aagggcgagaaaggcgacgcaggtcctcgagggaggagaggcaggcccggtgcgaatgga
cctcgcggcttacaaggaatacagggattgcccggccctccgggaagaccgggcgataag
ggcgacactggcttccctggttgggtgggtagaactgggtcttctggaaaaccaggacta
ccgggttctgtaggacctaaaggagacaaaggcgaaccgggtgaaagcctactggatatt
tctacgctcaaaggtgaaaaaggcgaccgaggctatgatggcgctcaaggcgcaatgggc
ccacccggacccccaggccccaggtccgagccagtccaatatattcccgggcctccgggc
cctccgggaccgccggggccgcccggcgtctcccttattggacccaaaggagaacccgga
atgagcgtttatgaagaacaccccatccatggcaacacgaagttttttggacgtccaccg
gttaaagctagtgctcttgacgaacttaaggctttaagggagttgaaagacctcaaggag
aaagatcggcacagagatgcacaacccgtgtacggcgcaagtaaccaaaggacggaagag
gccagtacaggtcaaactgtacctggtgcagcggttttccaaactacagaagaaatgatg
aggctagcatcagcaagtcctgtgggtgctctggcatacgtcacggaagagcaagctctg
ttcgtcaaagtgaactccggttggcagtacgtgcttctcggctctctcgtaacgcagtca
ccgcaggcccaagcgacgtctgcgcccgcgcctctgccaatgcccgccgctagcttggtt
catgaagcaccactgtcaaactcgatacacagttcacctgatgtacctgatggacctaga
ctccggatggcagcattgagtgatcccatgtccggcaacatgcacggcgtgcgtagagca
gactacgcgtgctacaggcaggctcggcgcgcggggctcaggggcaccttcagagccttc
ctcactagcagatcaacaaacttagacgctacagttcgctttgccgacaaccatctgcca
gtggtgaacacccgtggtgacgtgatcttcaaatcctttgccagcatctttgacggaaac
ggtggcatcatggccggcgcttccaggatatacagcttcgatggaaaaaatctgatgaca
gatccacattggcctcacaagataatctggcacggctcacacgcgagcggcgaaagagcg
ttggacgcgttctgcgacgagtggacctcccatgacccgcataggtccggcttggctgcc
tctctgtattcccataagctgttgtctcaagagaggtactcgtgtaataaccacttcata
gtcctttgcgtagaagtgtcatccaaaaccatacgtaataagagagaaacgcccaggttc
aatatgaccaatctactagacgacgaagattacctctacaatgccgaagaataccagcag
ctgcttaacgaaatatttgctcaacctttcagagaaaactag
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