Cydia strobilella (spruce-seed moth): 134745480
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Entry
134745480 CDS
T10503
Name
(RefSeq) uncharacterized protein LOC134745480 isoform X1
KO
K12823
ATP-dependent RNA helicase DDX5/DBP2 [EC:
5.6.2.7
]
Organism
cstb Cydia strobilella (spruce-seed moth)
Pathway
cstb03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
cstb00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
134745480
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
cstb03041
]
134745480
03009 Ribosome biogenesis [BR:
cstb03009
]
134745480
Enzymes [BR:
cstb01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
134745480
Spliceosome [BR:
cstb03041
]
Complex A
U1 snRNP components
U1 related factors
134745480
Complex B
134745480
Ribosome biogenesis [BR:
cstb03009
]
Eukaryotic type
Pre-60S particles
Helicases
134745480
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
ERCC3_RAD25_C
Helicase_C_2
Cas3-like_C_2
Motif
Other DBs
NCBI-GeneID:
134745480
NCBI-ProteinID:
XP_063535591
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All DBs
Position
11:8573407..8584990
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AA seq
838 aa
AA seq
DB search
MQYNGFSNQHPIFRPRPDRNEQFGKIPFFGGLHDFGGPKNFGPRNNNMGNKNNFRPRNDF
NGMRPDFNNQKSENGIQNDFGGPKEYRPRNNYNNQPQKKDYEDKGPGGNMQFYNGKPEFG
GPKQQQGGFQHKNNYGPKNFNNQNGHMNQQNFAQKKTFNNPNMGQQPNEFNGRKMQSMKA
KHPGDSLVKPMWDMANLEPIQKDFYKPHADVDSRSEEDVKMFRATKEIIVSGNNVPRPNQ
VFDEGNFPDHVMNTIKEQGWVEPTGIQAQGWPIALSGRDMVGIASTGSGKTLAYMLPAAV
HIVHQQRIQRGDGPIALILAPTRELAQQIQSVAQAYSARGLIRNTCLFGGSPKGPQARDL
ERGVEIVIATPGRLIDFLERGTTNLRRCTYLVLDEADRMLDMGFEPQIRKIIEQIRPDRQ
VLMWSATWPKEIQTLAEDFLNDYIKVNIGSLNLSANNNIKQIIEICEEHEKEHKLTNLLK
EISSERDNKVIVFVETKKKVDDIARAVRRNGHKALAIHGDKSQPERDAVLTEFRNGATTI
LIATDVAARGLDVEDVKFVVNFDYPNSSEDYIHRIGRTGRCQQSGTAYTYFTSGDSRQAR
ALVAVLLETGQTPPAKLSDMARNNNGSSGRNRWQQRKDNNSGSSSPRQQSNQWNNKMANN
VSNEDTQNMYQNRNMNQQPPRFNNQNQGNNQGYRQNNFQKQVPFPSPNMFESMGSYQGGY
NNGYPNGYQNQNGYGQRTYNNQRNGGQQYRNNNANGNKPNGSSGSSYGSPPPHFATPPHY
PQMHPHPQDMLGGKFYGGGVGVGVGGGGPCGYQAAVGAGVPYAHLPPGPLLYAAPVQQ
NT seq
2517 nt
NT seq
+upstream
nt +downstream
nt
atgcagtacaacggcttcagtaatcaacatcctattttcaggccccgtccagaccggaat
gaacaattcggcaaaataccgttttttggcggtcttcatgattttggagggcccaaaaac
tttggtcccagaaacaacaacatgggcaataaaaacaattttcgcccaagaaacgacttc
aacggaatgaggccagattttaataatcagaaaagtgagaatggaattcaaaacgatttt
ggtggcccaaaagagtaccgcccaaggaacaactataacaatcaacctcaaaagaaagat
tatgaggacaaggggcctggaggaaatatgcaattttataatggtaaacctgagtttggt
ggaccaaaacaacaacaaggtggatttcaacacaaaaataattatggacccaagaacttc
aataaccaaaacggtcacatgaatcaacaaaactttgcgcagaagaaaactttcaataat
cctaacatgggtcagcagcctaatgagtttaatggccgcaaaatgcaaagcatgaaggct
aaacacccaggagatagtttggtgaagcccatgtgggatatggctaatcttgagccaatt
caaaaggatttttacaagccacatgctgatgttgattcccgatctgaggaggatgtgaag
atgttccgtgctacaaaggaaattattgtaagtggtaataatgtgccacgccctaaccaa
gtgtttgatgaaggaaatttccctgatcacgtaatgaatactatcaaggaacagggttgg
gttgagcccactggaattcaagctcaaggctggcctattgctctttctggccgtgacatg
gttggtattgcatccacagggtctggtaagactttggcctacatgcttcctgctgctgtc
catattgtgcatcaacagcgcatccaaaggggagatggcccaattgctctcattttagcc
ccaacgagagagctagctcagcagattcagtctgtggcacaggcttacagtgcccgtggc
cttatcagaaacacttgcctctttggtggctctcctaaagggcctcaggccagagatcta
gaaaggggtgttgaaattgttattgccacgcctggaagattaattgatttccttgagcga
ggtaccacaaacttgcgccgttgcacatacctggtgttggatgaagctgatagaatgttg
gacatgggctttgagcctcaaattcgcaagattatcgagcaaattcgcccagatcgtcag
gttttgatgtggtcagccacatggccaaaagaaattcagactttggctgaagatttctta
aatgactatatcaaagtgaatattgggtcattgaatctctcggccaacaataacatcaaa
caaataattgagatttgtgaggaacatgagaaagaacacaaacttaccaacctcttgaaa
gaaatttcatccgagagagacaacaaagttattgtttttgttgaaacaaagaaaaaggtg
gatgacattgcgcgtgcagttcgccgaaacggccacaaggccctcgctattcacggagac
aaatcacagccggaacgcgacgccgtcctcacggagttcagaaacggcgccactaccatt
cttattgctaccgatgttgcagcccggggcttagatgttgaagatgtcaaattcgttgtc
aattttgactatcccaattcatccgaggattacattcacagaattggacgtactggcagg
tgtcagcagtctggcaccgcatacacctacttcaccagtggagactcgcggcaggctcgc
gctttagttgcagtgttgctggaaactggacagacgccgcctgctaagctgagcgacatg
gcacgaaacaataacggaagctctggacgcaaccgttggcagcaacgtaaagataacaac
agtggttcaagttcgccgcgccagcaaagcaatcagtggaacaataagatggctaacaat
gtttctaatgaagatacgcagaatatgtatcaaaaccgcaacatgaatcaacaaccacca
cgattcaacaaccaaaaccaaggcaataatcagggttacagacagaataatttccagaag
caggtgcctttcccaagccctaatatgtttgagtctatgggcagctatcaaggcggatat
aataatggctacccaaatggataccagaaccagaatggatatggacagcgcacatacaac
aatcagcgcaatggaggacaacagtaccgtaataataacgcgaatggtaacaaaccaaat
ggctcatcaggatcttcttatggatctcctccacctcactttgctactcctccacattac
ccacagatgcatcctcatcctcaggatatgctgggcggcaagttctacggcggaggggtg
ggcgtgggcgtgggcggcggcgggccgtgcggctaccaggcggccgtgggcgcgggcgtg
ccgtacgcgcacctgccgcccggcccgctgctctacgcggctcccgtgcagcagtaa
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