Cydia strobilella (spruce-seed moth): 134745554
Help
Entry
134745554 CDS
T10503
Name
(RefSeq) cleavage and polyadenylation specificity factor subunit 4
KO
K14404
cleavage and polyadenylation specificity factor subunit 4
Organism
cstb Cydia strobilella (spruce-seed moth)
Pathway
cstb03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
cstb00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
134745554
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cstb03021
]
134745554
03019 Messenger RNA biogenesis [BR:
cstb03019
]
134745554
Transcription machinery [BR:
cstb03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
134745554
Messenger RNA biogenesis [BR:
cstb03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage and polyadenylation specificity factor (CPSF) complex
134745554
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-CCCH
zf_CCCH_4
Torus
zf-CCCH_2
zf-CCHC
zf-CCCH_4
zf-CCCH_3
zf-CCCH_RBM22
Nab2-like_zf-CCCH_
zf-CCHC_2
Motif
Other DBs
NCBI-GeneID:
134745554
NCBI-ProteinID:
XP_063535689
LinkDB
All DBs
Position
11:complement(15397782..15401606)
Genome browser
AA seq
301 aa
AA seq
DB search
MEVLLANVDHIKFDIDFALDEQYGALPLPFPGMDKSTAAVCEFYSQPNGCTNGPQCPYRH
VRGDRTVVCKHWLRGLCKKGDQCEFLHEYDMSKMPECYFYARFNACHNKECPFLHIDPES
KIKDCPWYDRGFCRHGPHCRHRHVRRVLCTNYLAGMCPEGPSCKYMHPRFELPAPPEQTK
DAKRLPVCHYCSEVGHKASSCNKIPAEQREAAQRQEEARYRALGYIKPANENENSESPRT
QRMMHKPLEEVTCFKCGTKGHYANRCPKGHLAFLSSQNQNQQNQQNQNQWLRDKQQQQQQ
Q
NT seq
906 nt
NT seq
+upstream
nt +downstream
nt
atggaggtcctactcgctaacgtagatcatatcaaattcgatatagattttgcattagac
gagcaatatggagctttaccgttgccgtttcccggaatggacaagtccacggcagcagta
tgcgaattttacagtcaacctaatggatgtacaaatggacctcaatgtccttacagacac
gtccgcggcgaccgcacggtggtttgcaagcattggctgcgcggcctgtgcaagaagggt
gaccagtgcgagttccttcacgagtatgatatgtccaaaatgccggagtgctacttctac
gcccgtttcaatgcctgtcacaataaggagtgcccgtttcttcatatagacccggagagc
aagatcaaagactgtccctggtacgaccgcggtttctgccggcacgggccgcactgccgg
caccgccacgtgcgccgcgtgctgtgcaccaactacctagccgggatgtgccctgaaggg
ccctcctgcaagtacatgcacccgcgcttcgagttacctgcgccgccggaacaaactaag
gatgctaagcggttgcctgtttgtcattattgttctgaagtcggacataaggcgtcgtcg
tgtaataagataccggcagagcaacgcgaagcagcccaacgccaagaagaagcccggtac
cgagcgctcggctacatcaagccggccaacgaaaatgagaactccgagagccctcgcact
cagcgcatgatgcacaagccgcttgaggaagtcacctgctttaagtgcggcacgaaagga
cattatgccaaccggtgcccaaaggggcatctcgcttttctgtcgagtcagaatcagaat
cagcagaatcagcagaaccaaaaccagtggctaagggacaaacagcagcagcagcagcag
cagtga
DBGET
integrated database retrieval system
