Cydia strobilella (spruce-seed moth): 134745695
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Entry
134745695 CDS
T10503
Name
(RefSeq) serine/threonine-protein kinase SMG1
KO
K08873
serine/threonine-protein kinase SMG1 [EC:
2.7.11.1
]
Organism
cstb Cydia strobilella (spruce-seed moth)
Pathway
cstb03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
cstb00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
134745695
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
cstb01001
]
134745695
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cstb03019
]
134745695
Enzymes [BR:
cstb01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.11 Protein-serine/threonine kinases
2.7.11.1 non-specific serine/threonine protein kinase
134745695
Protein kinases [BR:
cstb01001
]
Serine/threonine kinases: Other
PIKK family [OT]
134745695
Messenger RNA biogenesis [BR:
cstb03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Other surveillance factors
134745695
mRNA cycle factors
Common to processing body (P body) and stress granule
134745695
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SMG1
PI3_PI4_kinase
HEAT_ATR
O_anti_polymase
HEAT
DUF2321
FRB_dom
Motif
Other DBs
NCBI-GeneID:
134745695
NCBI-ProteinID:
XP_063535882
LinkDB
All DBs
Position
11:15407046..15617925
Genome browser
AA seq
3189 aa
AA seq
DB search
ILRPCVVIFVPLETILVMLSTTANNKVKNLKGSEPPDVLETEEIGQENTDDKVRGYVGSY
DASSSFGGPSRDGRFRPRGRVTEFRHSRGGGRGGRGRGLPPRSDRDLDGSFKYHEPLAHA
AADSWAQTNSTKNFYERSELAVHLPEDPRISKLLRRLCAEVDVEKSLAICSKLQEAVMLP
ENARYIRRSYDILVESLLDVLYDAPGPETKEQAAVVLGRIGYVMGPDFRKHLEWIKTTYA
AHNSSIKHLLILSFSETFQLDFQTPNLSDFAETTLVRLQVIIEGTDSADVFMAAITAMIV
MSNSYPEHFANHFVDTVDILVGWHVDNAQPRKIKEFALQSLFKLSRHWQADVGFSVNLLN
QFVEDMVAYSTDMDSNKSDTDTESTSAEDCIQKITSFLNVFNTVVKSLGSLLSPTTSQTV
SWSFLTESITKILQVLTKTLKDDAEPDLIVAGNESITLLLKHLQTKAMSSFPALFSLISM
EITTYLNDEENVCLSVIDLISKTVKEIASNLPIEFITETIGPESNLRQLRNSESALVLNG
VMSVYSNLLNLKNIPLLQETYKFVLTDIQNSYSVIVPDIQIIQLEYTDEVCKEDAEKNVI
FYLQCLSELANASNSIIGMWALQPSILELLAIKMRPEDDKLSQDKPALQYAVLYLLYSHC
RKNNHFIASSDLVKMKNSQQRANDIFGLSKLNLGEVKGTSPTSGHLAVILNTLSVILEKE
VCKETMLLVLHWVSDILSQLDKYLPIVSMSKGFLILTTNMLSLAYCFDDDIVLIVMKNSQ
LLLKNKNLTLNAMVLKTIAVLCILHMDNQNDAVSNICMEVLFELPWDIVQLELDKQVIQV
FRYRKMSLHLLNNESKANSLKEYLLKGSYTTLSNQHFKAIIDCILQSTIEDKNLLLNAFL
TSWPLHSQDADENNIKFFRQCATNFSSICISWALSELALTTVTLKLRTALGKPQETFMKI
EGALKGTARETSSLETKYVSTDQRHLMDVVVGEQMRSRWITEFMMFLEKYIYNAAEGTAT
VLPPVAKPVRTFFYTNWTTCRDWQNRLRPASLAVSQYAGHYGAAIYHASLILQTAATSTT
NIDIEAITMNLARALIKIQEPEVLHGLYVWIKQTFDKKLYWLKGAAEQANSRHELALEFY
KKLNNMKTQEDKKESGDTPQTETKSEKFIDEQMMNSYKHIQNWEDMQEWKENENQRKHNS
PWNSFTALRVFEGSTEIPDELTNWDILDMNSNEISKNACSYQNLINKIESTLVCTAVNVC
YTDNFEQYERLITDCDALLKCSAQEFARTNAVHFMKDIAVLQLANLGLRNIAKNGKVISN
PFKPSVLKEHKYGTDFENLSRILWWNQYFTKLNMTEENIFYAECLRLDVIKNARKHSNIG
MAKRELLNHFKHNSAFQVYLGNVGNLDELSEVLVMSTNTYDLDIWTLNNTTALMELCKLT
YAKEETKMQAINLCSNISLGFSQRLAMGEQSYELREKGTRMLLTLSKWIQSQTENENILE
VDSPLMKLVSALPEIGLVDNNISENVIPLADSAVGKLLQFGVNQCPGLAKAWANFAAWCF
RWGRKMVEFSSKTREQLTDNDKVQIESVMIGCSPQDFEAVCEILSKTKATCDDEDIDWNE
INTSEMIESQLRTVPSLSNAFPEHLALLVDIWRQAQKRVFSYFELSADAYFKFLQLICAS
DYINHSGENAVVNATLRLLRLIVKHAMELQTVLESGLANTPTQPWKVIIPQLFSRLNHPE
TYVRKCVSDLLCRLAEDTPHLITFPAVVGAVENETKDLTELSVARSYLSNDEENSQPDSD
LDDTASDKVVNNELNSCFLDMVETLTKQAPKTILQVKLLVKELQRINLLWDELWLGTLLQ
HHSEFNKRLSQLETEVARVKDNANLSAEDKEKLIKEKHRIIFEPVVYVLEQLERITSAKP
ESPHEANFQAKFHNLITEVIERLKNPTNPEKPQESWAPLKQLQLKLQQKVNKRTSYILRM
SDISPVLAELKNTVITMPGVHTNQRTVRVTIKSVENNVAILPTKTRPKKLVFCGSDGRAY
TYLFKGLEDLHLDERIMQLLSITNTMLARDSENNDNQTYRARHYSVIPLGPRSGLISWVD
NVTPLFALYKRWQNREAAILSAKTNKTVNVLRPSELFYNKLNPLLKEAGIPTENRKEWPV
SILKQVLQELAAETPNDLLWREIWCSSVSPEQWWQMVRRYSYSVAVMSTIGYIIGLGDRH
LDNVMVDLTSGEVVHIDYNVCFEKGKTLRVPEKVPFRMTPNLVTALGVTGVEGIFRLACE
HVLRTMRRGRETLLTLLEAFVYDPLVEWGGAKKRRGERDLRAAVAMLAVRAHELKQQFAD
VTEQFLAVLPDVQASADQWLQETEELKSIETRLHDCHQQMALVKEIEAYGPNLSSHPLYA
ISQKYSSYKKAKNAVEDSMKALVKILNDFDTQIESFAAANEAINGPKLVTWVQEFSGPSE
DDEKPIFDHIKEFLANAGQSSMITQCEQAENELNQSMQETIVLVRSCLELLSQYVAVSQY
YPQTHTEYHRVVMFRKWLAEALESKSPEVCREVSSQVTALVNADNANNTEQIVAYNFQLQ
TITAEANVNLNKAIERLQIHGGPDAVAIAQAAYIEAKTNISSWVRSEERAGAALESVVIG
MLCNLNRRYLILENSAQSAGDCLVDLTSREGEWFLDDMSALSMQAVELLSLLPLQSASAE
DSAMPVAVECVRNANLLLSDLVQLNYNYSTIILPEAMKKLHQEDPSTIMMISELNAVIMN
TPMPLNELLTQLEMNFRYLLMDMECPAGAQLLAAELRARYEALLSGDSPGRMVLMGLNGL
FAALEMRARELAEPLAQPVPPAWRKIDHVSDAMHMSAALQSPALRSVLEDLFLVRRVQAV
GEALALCAQTAAAFRGSGPLAVYDDTALCKPVKRFTAEYVSRCVLGVHSKALASVLCLLL
RRQRLDLAAEVEQKEIGASWSVSLESLCEKVVATSPLTERARVLAARVAGALVAQLRAQH
AAAARARAGSAQHAARSRLAAHAQLHAEVLGSNQEAPVLARRARDLAAATERLSAAAAKA
QGLLTAAHQRVKWGAGANPALQAPLALLEAAWGARSSRTRRLAAAARALARHARAAANMR
ADRAKTAKTARQALAHWEKACTLSQKYSLKVTDAQHALMEMLHPEGNIDQHWTQQYLEDL
DISAGLQQS
NT seq
9570 nt
NT seq
+upstream
nt +downstream
nt
attttgcggccatgtgtggtcatattcgtgcccctagagacaattttagtgatgttatca
accactgcaaataataaagtgaaaaacttgaaggggtcggagccccccgacgttcttgaa
acggaagaaatcggccaagaaaacacggatgataaggtcagaggttatgttgggtcgtat
gatgcatcgtcttcttttggcgggccgagccgagacgggcgttttcggccccgcggccgg
gttacggagtttcgacactctagaggcggcgggcgcggcggccgaggcagaggcctgccg
ccccgcagcgaccgtgatctggatggttcctttaaatatcacgaaccgttagctcatgcc
gcggctgattcctgggcccaaacgaactctacaaaaaatttctacgagcgatctgaactg
gctgtccatctgcccgaagacccacgtatatctaaactgctgcgtcgcctgtgtgccgag
gtggacgtcgaaaagtcgctcgcaatatgcagcaagctgcaggaggctgtcatgcttcca
gaaaacgccagatacattagaagatcttatgacatacttgttgaatcacttcttgatgtg
ctgtatgatgccccggggccagaaacaaaggaacaagctgctgttgtgctaggcaggatt
ggttacgtcatggggccggatttccgtaaacatctggagtggattaagaccacatatgca
gcacataatagctctatcaaacacctgctcatactgtccttttctgagacatttcaactg
gactttcagacaccaaatctgtcagactttgcagaaacaactctggttcgcctacaagtc
attatagagggcactgactcagccgatgtctttatggctgcgataactgccatgatagtg
atgtctaactcatacccagaacattttgccaatcattttgtggatactgtggacatttta
gtcggctggcatgtagataatgctcaaccgagaaagatcaaggagtttgctctacaatca
ctgtttaaactgagccgtcactggcaggctgatgtcgggttctcagtaaacctgctgaac
caatttgttgaggatatggtagcttattcaactgacatggattctaataaaagtgacaca
gataccgaatctacatcagcagaggactgcatccagaagataacctcatttcttaatgtg
tttaatactgttgtaaagagtctgggcagtttactcagccctactacatctcagactgtc
agctggtctttcctgactgaatctataactaagatacttcaggtacttactaaaactttg
aaagatgatgcggaacctgatttgattgtggctgggaatgaaagcattacattactattg
aagcatttacaaactaaagctatgtccagtttcccagctttgttctcactgatttcaatg
gagattacaacttatttgaatgatgaagaaaatgtgtgtctcagtgtcattgacttaata
tctaaaactgtcaaagagattgcatcaaaccttcctatagaatttatcactgaaacaata
ggtccagagtctaatttgcgtcagttgcgcaattcagagagtgccctggttctaaatggg
gtaatgtcggtatacagtaaccttttgaacttgaagaatatcccactgttacaagaaact
tacaagtttgtacttacagacatacaaaactcatattctgttattgtgcctgacatacaa
attattcagcttgaatacactgatgaagtatgcaaagaagatgctgagaaaaatgttatt
ttttacctgcaatgtctttccgagcttgccaatgctagtaattcgatcatcggcatgtgg
gctctgcagccaagcattttagaactcctggcaattaaaatgcgtcctgaagatgataaa
ttgagccaagataaaccagccctccaatatgctgtgctgtatttgctttactcccattgc
agaaagaacaatcatttcattgcatcaagtgatttagtaaagatgaagaactcccagcag
agagcaaatgatatatttggcttatccaaattaaacctcggagaagtgaaaggcacaagc
cctacatctggacacctagcggtaattctcaacacattgagtgtaatattggaaaaagaa
gtttgcaaggaaaccatgttgcttgtccttcactgggtttcagacatactaagccagctt
gacaagtacctaccaattgtcagcatgtctaaaggattcctcattttgactacaaatatg
ctgtctctagcttactgttttgacgatgacattgtgctgattgttatgaaaaacagccag
ttgctgttaaaaaacaaaaacctcactttaaatgcaatggtattaaaaactatagctgtg
ttgtgcatattacacatggacaatcaaaatgacgcagtgtcaaacatttgtatggaagtg
ctttttgaacttccgtgggacatagtgcaactagagcttgacaaacaagtcatacaagta
ttcagatatcgaaaaatgagcctacatctgctcaacaatgaaagtaaagccaactctcta
aaagaatacctcttgaaagggtcatacacaaccttgtcaaatcaacattttaaagcaata
atcgattgtatccttcagtctacgatcgaagataaaaatctattgctaaacgcattttta
acttcttggcccttgcattctcaagacgctgacgagaataatattaaatttttccgtcaa
tgtgccacgaatttctcatcaatttgtatcagctgggcactatcggaactggctttgact
actgtaacattaaaactgagaactgctcttgggaaacctcaagaaacattcatgaaaata
gaaggagcactgaaagggactgccagagagacttcttcattagaaactaaatatgtgtct
acagatcagcgacatttaatggatgtggttgttggagagcaaatgagatcccgctggatc
acagagttcatgatgttcctcgagaaatacatatataatgctgctgaagggacagccaca
gttctaccaccagtcgccaagcccgtacgcacgttcttctatacaaactggacaacatgt
cgagattggcagaacaggctgcgaccggcgtctcttgctgtcagtcaatacgctggccat
tacggcgccgctatctaccacgcgtcgctgattctccaaactgctgccacttctacaact
aacattgatatcgaagctatcaccatgaatctagctcgtgctctcataaaaatccaagaa
ccggaagtattgcacggactctacgtttggatcaaacaaacgtttgacaaaaagctgtat
tggctaaagggcgcagcagagcaggctaattcgcgacacgagttggctttggaattctat
aagaaactaaacaatatgaaaacccaagaagacaaaaaagaatcgggtgacacgcctcaa
acagagactaaaagtgagaagttcattgatgaacaaatgatgaacagctacaagcatatt
cagaattgggaggatatgcaggaatggaaagaaaatgagaaccaaaggaagcacaattcg
ccgtggaactcatttacagcactgcgagtattcgagggaagtactgaaattcccgacgaa
cttactaattgggacattctggatatgaattctaatgagatatctaaaaacgcttgctca
tatcaaaacctcataaacaagattgaatcgacgttagtgtgcactgctgtaaacgtgtgc
tataccgataactttgaacaatatgagcgtttgataacagattgtgacgctctgctgaaa
tgtagcgctcaagaattcgctagaacgaatgctgtgcatttcatgaaagatattgcagtg
cttcaattggctaatctaggactaagaaatatcgccaagaatggaaaagtaatttcaaat
ccattcaaaccgtcagttctaaaagaacacaaatatggcacggacttcgaaaatctcagt
cgcattctttggtggaatcaatattttacgaaactgaacatgactgaggagaacatcttc
tatgcagagtgccttcggttagatgtaataaagaatgccaggaaacattctaatatagga
atggctaaaagagaactattaaatcatttcaaacataattcagcattccaagtgtatctt
ggtaacgttggtaatttagacgaactgagtgaggtattggtaatgtcgacaaacacgtat
gatttagacatttggacattaaacaacacgacggcgctaatggaattatgcaaactaacg
tatgctaaagaagaaaccaaaatgcaagctatcaatctgtgctctaatatatccctggga
ttctcgcaaagacttgcaatgggagaacaaagttacgaattgcgcgaaaaaggaactcgg
atgcttttgactttgtcaaaatggatccaaagtcaaaccgagaatgaaaatatcttggaa
gtagattcgcctttaatgaaattggtatccgctctacctgaaatcggtcttgttgacaat
aacatctctgaaaacgtgatccctctagctgactccgctgtcggcaagttattgcagttt
ggagtcaatcaatgtccaggacttgctaaagcatgggctaattttgcagcttggtgcttc
agatggggcaggaagatggtcgagttcagttcaaagacgcgtgaacaattaactgacaat
gataaagtacagatagagagcgttatgattggatgctcaccacaggacttcgaagctgta
tgtgaaatcttatcaaaaacaaaagccacttgtgacgacgaagatattgattggaatgag
atcaacacatcggagatgatagagagtcaacttcgcacggtgccttccctgagcaacgct
ttccctgaacaccttgccttgctggttgatatatggcgccaagctcaaaaacgagtcttt
tcttacttcgagctgtcagcggacgcttacttcaagttcctgcagttaatatgcgcctcg
gattacataaatcacagtggagaaaatgcagtcgtgaacgctactttaagactgcttcgt
ctcatagtaaaacatgctatggagctacagactgtcttggaatctggattagcgaacaca
ccaacgcaaccctggaaagtgattattccacaactcttttcaagattaaatcatcccgag
acttacgtgaggaaatgtgtttctgatctgctatgtcgactcgcggaagatacgcctcat
cttattacatttcctgctgttgttggtgctgtagaaaacgaaacgaaagatctgaccgag
cttagtgtagcaagatcttatttgtcgaatgacgaagaaaacagtcaacctgatagtgac
ttagacgatacggctagtgacaaagtcgtaaataatgaactaaattcttgtttcttagac
atggtggagacattaacgaagcaagcaccaaagacaatacttcaagtgaaattgttagtg
aaggagttacagaggattaatcttttgtgggacgaattgtggcttggaacacttttgcaa
catcactccgagtttaataagagactctcacaactggagacagaagttgctagagttaaa
gataatgctaatctgagcgctgaagataaagaaaagctgattaaggagaaacatcgaatt
atatttgaacccgttgtatacgtattagaacaactagaacgtattacgtctgcaaaacca
gaatctcctcacgaagcgaatttccaagcgaaattccataatctgataacagaagttatc
gagagactgaaaaatccaacaaatcctgaaaaaccacaggagtcttgggcacctttgaaa
cagttacagcttaagctccaacaaaaagtcaacaagagaacttcttacattttgaggatg
tcggatattagccctgtgttagctgaactcaaaaacactgttatcacgatgcctggagtc
catactaaccaaaggactgtcagagtgacgataaagtcagtcgagaacaatgtggctatc
cttccaactaaaaccaggccaaagaaattggtattctgcggctcagacggtagagcgtac
acatatttattcaaaggcttagaagacttacatttggacgagagaataatgcagctgctg
tccattacaaatacaatgctggctagagactccgaaaacaatgataatcagacttacaga
gcgcggcactactccgtgattcctttaggaccccgttcagggttgatcagctgggtggat
aacgtaacgccactcttcgcgctttacaaacgctggcagaatcgcgaagcggctattctg
tccgctaaaacgaataaaacagtcaacgtgttgcgcccttcagaactgttctacaataaa
ctgaatcctcttttgaaagaagctggtataccgactgagaatagaaaagaatggccggta
tccatacttaaacaagtgctccaagagttagcagcggagactcctaacgatttgctgtgg
agagagatatggtgcagcagtgtgtctcccgagcagtggtggcagatggtccgtcggtac
agttactcagtggcagtgatgagtacaataggctatataatcggcctcggtgatagacat
ttggacaatgtgatggtggacttgacgtctggtgaggtggtgcatatagactataacgtg
tgcttcgagaaggggaagacgctgcgggttccggagaaggtgccgttcaggatgaccccg
aacttggtgacggcgctcggcgtgactggtgttgagggtatattccgtctcgcctgcgag
cacgtactacgaaccatgcgccgtggacgcgagaccctcctaaccctacttgaagccttt
gtctacgatcccctggtggagtggggcggcgcgaagaagcgcagaggagagagggatctt
cgagctgccgtcgccatgttggctgtacgggcacacgaactgaaacaacagtttgcagac
gtcacggagcagttcctggctgtgctgccagacgtccaagcgagcgccgaccagtggctc
caggaaaccgaagaactcaagtccattgagaccagactccatgactgccaccagcagatg
gcgctggtcaaagagatagaagcgtacggaccgaatctaagcagccatcctttgtatgct
atctcgcagaaatactcctcctacaaaaaggcaaagaacgctgtcgaggactctatgaaa
gccctcgtaaagatactcaacgattttgacactcaaatagaaagcttcgcagcggccaac
gaagctatcaacggtcccaaattggttacatgggtgcaagaattttcaggcccaagcgaa
gatgatgaaaaaccgatattcgaccacatcaaagagttcctcgcaaatgctggacagagc
tcaatgatcactcaatgcgaacaagcggagaacgaactcaatcagagcatgcaagagact
attgtcctcgtcagatcctgcttagagctcctttcacaatatgttgcggtgtctcaatac
tacccgcaaacccacaccgagtaccatcgcgttgtgatgttccgcaaatggctggccgaa
gctttagagagcaaatcacctgaagtgtgccgtgaagtctccagccaagttacggctcta
gtcaatgctgacaacgcaaacaatacggaacagatagttgcgtacaacttccaactacaa
actattactgctgaagccaacgtgaatttgaacaaggcaattgaaagactacaaatacat
ggaggtccagatgcggtggcaattgctcaagcggcatacattgaagcgaaaacaaatatt
agctcctgggtgcgttctgaagagagggctggggcagcgttggaaagcgttgtcatagga
atgctatgcaacttgaacagacgatacctgatcttagagaacagcgcacaaagcgcgggc
gactgtttagtagacttgacgtccagagaaggagaatggttcttagacgacatgagtgct
ttatcaatgcaagctgttgaactactatccctgctacctttacaatcagcttcggctgaa
gactcggccatgcctgtagcagtggaatgcgttcgcaatgccaacttactcttatctgac
ctggtccagttgaactacaactatagcaccataattctgccggaagccatgaagaagctt
caccaggaagacccatcgacgataatgatgatcagtgagctgaatgcggtgataatgaat
actccgatgccgttgaatgagctgctcactcagttggagatgaacttcagatatttacta
atggatatggagtgccccgcaggcgcccaactactagccgccgagctccgcgcccgctac
gaagccctgctgtccggcgactccccgggccgcatggtgctgatgggcctcaacgggctg
ttcgcggcgctggagatgcgcgccagggagctggccgagccgctggcccagcccgtgcct
cccgcctggaggaagatcgaccacgtcagcgacgccatgcatatgtcggccgccctccaa
agcccggcgctgcgctccgttctcgaagacttgttcctcgtccgtcgcgtccaggccgtc
ggcgaagccctagcgctgtgcgcgcagaccgcggccgcgttcaggggctccggccccctg
gccgtatacgatgacacggcgctctgtaaacctgtcaaacgatttaccgccgaatacgtg
tcccgctgcgtgttaggcgtgcactcgaaggcgctagcctcagtgttatgcttactgctg
agaaggcagcgtctagacctcgcagctgaggtggaacagaaagaaattggagcatcatgg
agcgtgtccctggagtcgctctgcgagaaggtggtcgccacgtccccgctgacggagcgc
gctcgcgtgctggcggcgcgcgtggcgggcgcgctggtcgcgcagctccgcgcgcagcac
gccgcggcggcgcgcgcccgcgccggcagcgcgcagcacgccgccaggtccaggctcgcc
gcgcacgcgcagctacacgctgaggtattgggttcaaatcaagaggctccggtgctagcc
cgccgcgccagagacttggccgcggccaccgagcggctgtcggccgccgccgctaaggca
caggggctactgacggccgcccatcaaagagtgaaatggggtgccggcgccaacccggcc
ctgcaggcgccgctggccttgctggaggcggcgtggggcgcgcgctcgtcgcgcacgcgc
cgcctcgccgccgccgcgcgcgcgctcgcacgccacgcgcgcgccgccgccaacatgcgc
gccgaccgcgccaagaccgccaagactgcgaggcaggcgttggcacactgggagaaggct
tgcacgctgtcacaaaagtactccttgaaagtgacggatgcacaacacgcactcatggaa
atgcttcaccctgaaggcaacattgatcaacattggacccagcagtacttggaagatctt
gatatttctgctgggttacagcaatcgtaa
DBGET
integrated database retrieval system
