Cydia strobilella (spruce-seed moth): 134745870
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Entry
134745870 CDS
T10503
Name
(RefSeq) mutS protein homolog 4-like
KO
K08740
DNA mismatch repair protein MSH4
Organism
cstb Cydia strobilella (spruce-seed moth)
Brite
KEGG Orthology (KO) [BR:
cstb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
cstb03036
]
134745870
Chromosome and associated proteins [BR:
cstb03036
]
Eukaryotic type
Meiosis-specific proteins
Others
134745870
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MutS_V
MutS_III
MutS_II
MutS_IV
Motif
Other DBs
NCBI-GeneID:
134745870
NCBI-ProteinID:
XP_063536035
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All DBs
Position
12:14078379..14093575
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AA seq
1161 aa
AA seq
DB search
MIIHVYISISGIRGSSSLLPVKASIQNSAPRYQFNSNNEDSTSKSKKFSMGPPLEPPKSL
KRKLLPTSSSTKPESSSSDKVRVRILASDSAAADSDFCTPRNRPQALRYISSSSRGGYSG
TRSARSSSTAVEASVILAISEGRGMARGEIGMAAVDLRHPNLVLCQFSDSLLYTHTMTKI
NYFNPIEIIVPNTFCEGVQPNQLYQLIRDQYPALNLTTVQRKHFNAGAGRQHIQTLCAPQ
YSAVYLQVVHKHYALTAAAAVLKYVEYIQCIVFARESLKIVYHSSENTMIIDVGTATQLE
LVQPLVSSAGATCCLLGVLGPTYTIGGIRALRAAILQPSCNKEIIENRLDAVQDLMENEA
GLMIGLQDVLKKLSDIDRILLLCVEQQNQNMDIMGEAQLNQTLLLKTTMEMVPKLVEALQ
PADSGRLKRMKLDFENPHYNEIAERIKNVIQDDAHLEKGAMGSLQRCFAVKPDINGLLDV
ARRTYSELIDDIQKIVEQLGESYDLALRLNQNMMKGFHIVLTIAPKNRRTFNVEDLPPIF
IQVQNNGSRISMTTEELVVLDQQAKESLNEIQKMSNIVIGSLLKDLRPFMASLYTLCENV
AELDILLAMAQASTVGSYIRPDFSDYLDIRNSIHPLLDYNTQTMPVPNDIYASPEQNFTI
ITGPNMGGKSIYIKQIAVLQIMAQLGCFLPATNAVLRICDRVFSRMGFNDSVEMNASTYV
VEMKETQHILKGLTTSSLVIIDELCRGTSTEEGTSIAWAICEELLASDAFTFFTTHFMYL
TRLQDLYFNVVNLHTEVKEEITSSPTQTTSSQMTEKRLIYEHKINPGVTTIENYGLSLAA
KTNLPEGTVKLAWELAELINASRKPQDTNAEAKTDERLLYEFNAELRKQSRRHPNNDNII
NDLNNKFKEDNPLLIERLKADRLSKENNNDSIANRSSIPTRQESSNEAVLSKNSYSSSNA
VIPIQNHFISNRSRQNALTHAVENDKADNEENENTMAQDLGNDAGITSSTGLLNTMINHD
NINPIPDLSAEDFEDEALAAENEMNDHLDSPIHTNVIVSNYDDSNFVTDMIDGDNDKTNE
LCNSGRSDDSAFTDSVLADAVTQVIECSNTFQGDSISDASEMSTDDELMTETVNEINMEL
DNGIVSLDDLVLTPPPEFRDD
NT seq
3486 nt
NT seq
+upstream
nt +downstream
nt
atgattatacacgtatacatttccatttcaggaattcggggaagctcgtcattattacct
gttaaagcttcaattcagaatagtgcccctcgttaccagtttaacagtaataatgaggac
agcacatcaaaatcaaagaaattttccatgggacctccattggaacctccaaaaagttta
aagcgcaaactattgcctacttcaagttccacaaaaccagagtcatcatccagtgacaaa
gttagagtcagaatactcgccagcgattcagcggctgccgactctgacttctgcaccccc
agaaacagaccacaggctttgcgatacatcagcagtagtagcagaggtggatacagcggc
acaagatcagctcgatcatccagtactgccgtagaagcaagcgtcattttagcaatatcg
gaaggtagaggtatggcgcgaggtgagatagggatggcagcggtggacttgagacacccc
aacttggtgctgtgtcagttcagcgactcactcttgtacactcacaccatgaccaagatt
aactactttaatcctattgaaataatagtccccaacacattctgcgaaggcgtgcagcct
aaccaactatatcagcttatacgggaccaataccctgcgttgaacttgactacggtgcag
cgaaaacattttaatgctggtgctggtcgacagcatatacagacattgtgcgcgccgcag
tacagcgctgtgtatcttcaggttgtgcataagcactacgctttaacagcggcggctgca
gttcttaagtatgtggaatacatccagtgcatagtttttgcgagggagtcactgaagatc
gtctatcattcttctgaaaatactatgatcattgatgttggaacagcaacgcaactagag
ctagtccagccattagtttcctctgctggcgcaacttgctgtctcttaggcgtattagga
ccgacatacaccatcggtgggatcagggcgttaagagccgctatactgcagccctcgtgc
aataaggaaattattgagaatagactagacgctgtccaggacttgatggagaatgaagcg
gggttaatgatcggattacaggacgtgctcaagaaattatcggacattgataggatattg
ttactatgcgttgagcagcaaaatcaaaacatggacataatgggggaggcgcagttgaac
caaactttgctactaaagactacaatggaaatggtaccaaagctggttgaagctctccag
cctgcggatagtggaaggcttaagagaatgaaattggattttgaaaacccacactacaat
gaaatagcagaaagaatcaagaacgtaatccaagacgatgcgcatttagagaaaggcgct
atgggtagtctgcagcgctgctttgctgtgaagccagacatcaatggacttttagacgta
gcccgaagaacttactcggaacttatagacgacatacagaagatagtagagcagttggga
gaatcatacgacttggcgttaaggctaaatcagaatatgatgaagggattccacatagtg
ttgacaatcgctcccaaaaacagaaggactttcaacgttgaagacttgcctccgattttt
attcaggtccaaaacaatggtagcaggatttctatgactacagaagagttggtggttctt
gatcagcaagctaaagagtctctaaatgaaatacagaaaatgagcaacattgtgattggg
agcctgctaaaagacctacgaccatttatggctagtctttatactctgtgcgaaaatgtt
gcagagttggatattcttctggccatggctcaagcaagcacagtggggtcctacattcga
ccggattttagcgattacctggacattcggaatagcatacatccacttctggactacaat
acgcaaaccatgcccgtccctaatgatatctacgccagtcctgaacagaatttcactata
atcactggtccgaatatgggcggcaaaagcatttacataaaacagattgctgtgttacaa
attatggcgcagctgggttgcttcttgccagcaactaacgcagtactcagaatctgtgac
cgtgtcttctcacgaatgggcttcaacgatagtgttgaaatgaatgcttctacttatgtc
gttgagatgaaggaaacgcaacatattttgaaaggtttgacgacatcaagtttggtgata
attgacgaactttgtagaggaacatcaactgaggaaggaacgagtatagcttgggctata
tgtgaagaattacttgcaagtgatgccttcactttctttacaacacatttcatgtatctg
acaaggctacaggacctgtatttcaatgtggtcaaccttcacactgaagtaaaagaagaa
ataacaagttcgccaacgcagacaactagctcgcaaatgaccgagaaacgtttaatctac
gaacataaaataaatcctggtgtcactaccatagaaaattatggcttgtctctggcggcg
aaaacaaacttgcctgaaggtactgtcaaattggcttgggagcttgcagaacttataaat
gcaagcagaaagcctcaagacacaaatgctgaggccaaaactgatgagagactgttatac
gaatttaatgctgaattaagaaaacaatctaggcgtcacccgaataatgataatatcatc
aatgacctaaataataagttcaaagaagacaacccccttttaatagaaaggctaaaagca
gacagacttagtaaagaaaataataatgattctattgctaacagatcatcgatacctaca
agacaagaatcatcgaacgaagctgtgctcagtaagaattcttattcatccagcaatgcg
gtaattccaatacaaaatcattttatatctaacagatctcgtcaaaatgctttaacacac
gctgttgagaatgacaaagcagataacgaagaaaatgaaaatactatggcgcaagatctt
ggaaacgacgctggtattacatcttcaaccggactcttgaataccatgattaaccatgac
aacataaatccaattcctgacctgtcagctgaggattttgaagacgaagcattagctgca
gaaaatgaaatgaatgatcatttagatagcccgatacacacaaacgtaattgtcagcaat
tatgatgactcaaatttcgtgactgatatgattgatggtgataatgataaaacaaacgaa
ttgtgtaattcgggaagatctgatgattctgcgtttactgattcagttcttgccgatgcg
gtaactcaagtaatagaatgttccaacacttttcaaggggactcaatcagtgatgcgagt
gaaatgtcaacagatgatgaattaatgactgagacagtgaatgaaattaatatggaatta
gataatggaattgttagtttagatgacttagtgcttactccaccaccagaattcagagat
gattag
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