Cydia strobilella (spruce-seed moth): 134746001
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Entry
134746001 CDS
T10503
Name
(RefSeq) transcription elongation factor SPT4
KO
K15171
transcription elongation factor SPT4
Organism
cstb Cydia strobilella (spruce-seed moth)
Pathway
cstb03250
Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:
cstb00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
134746001
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cstb03021
]
134746001
03019 Messenger RNA biogenesis [BR:
cstb03019
]
134746001
Transcription machinery [BR:
cstb03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription elongation factors
134746001
RNA polymerase I system
134746001
Messenger RNA biogenesis [BR:
cstb03019
]
Eukaryotic type
mRNA processing factors
3' end processing
DRB sensitivity inducing factor (DSIF) complex
134746001
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Spt4
zf-C4
Motif
Other DBs
NCBI-GeneID:
134746001
NCBI-ProteinID:
XP_063536235
LinkDB
All DBs
Position
12:7440891..7442469
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AA seq
118 aa
AA seq
DB search
MSLNLDVVPKDLRGLRACLVCSLIKTFDQFEYDGCDNCDEFLRMKQNKDNVYDCTSNNFD
GMIAVMSPEDSWVCKWQRISRFRQGVYAISVSGRLPAGVIREMKSRGIVYRPRDTSQR
NT seq
357 nt
NT seq
+upstream
nt +downstream
nt
atgtctttgaatttggatgtggtgccaaaagatttaagaggccttcgggcctgtttagtt
tgctccttaataaagacattcgaccaatttgagtacgatggatgtgacaactgcgacgag
tttctacgaatgaaacaaaacaaagacaacgtttatgattgcaccagtaacaatttcgat
ggaatgatagcagtaatgagcccagaggacagttgggtgtgcaagtggcagcgcatcagc
cggtttcgtcaaggagtctatgcaatctcagtatcaggacgactgccagccggagtcatc
agagaaatgaagagccgtggcattgtataccgaccaagagataccagccagcgataa
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