Cydia strobilella (spruce-seed moth): 134746026
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Entry
134746026 CDS
T10503
Name
(RefSeq) general transcription factor IIH subunit 1
KO
K03141
transcription initiation factor TFIIH subunit 1
Organism
cstb Cydia strobilella (spruce-seed moth)
Pathway
cstb03022
Basal transcription factors
cstb03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
cstb00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
134746026
09124 Replication and repair
03420 Nucleotide excision repair
134746026
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cstb03021
]
134746026
03400 DNA repair and recombination proteins [BR:
cstb03400
]
134746026
Transcription machinery [BR:
cstb03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
134746026
DNA repair and recombination proteins [BR:
cstb03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
134746026
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PH_TFIIH
BSD
Motif
Other DBs
NCBI-GeneID:
134746026
NCBI-ProteinID:
XP_063536303
LinkDB
All DBs
Position
1:13810713..13829798
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AA seq
573 aa
AA seq
DB search
MTTSSEDVLMSVSYVRYKKGDGTLYVMNQRLAWMLENRDTVAVSHKYADIKTQKISPAGK
PKVQLQVVLHDGTCSTFHFVNPAGPEAQAKDRDQVKGLLVNLLPKFKRQIDGELEMKSRL
LSLHPTLKHLYEDLVISKVINSEEYWNTPTLKHYTESNNIKQEAGVSGAFLADIQPQTDG
CNGLKYNLTQDIIDAIFKTYPAVRKKHIDYVPNKMTEAEFWTKFFQSHYFHRDRIASSSS
KDLFGECAKLDDHAIASAMKHTTLDLTVDLPKFTEPIPLLPTEDEAPVEKDKGDSTSIHR
NMIKRFNQHSIMVLKASQKTNSSSSDSNNKTANNNNKVVENGVKETNGTAEKRPANEKNA
LEPVDKRRRILEKIHYEDLEDSNRNEDAQELKLSKIERYLLGPSSQVNQSGSSTNHPPPL
SALASICQAWSSGQQCARPIRVGAAGCVAALGELSPGGALMRQHHAAAMAQLIPADVKSE
LNRLYLSAGELLRELWRCFPAPAAPAQEADSARADNFYAALLRFRNVKLRPFEEKMLHDL
TPLATSLTKHINQMIDVACTKYALWQQRQAKLR
NT seq
1722 nt
NT seq
+upstream
nt +downstream
nt
atgacaacgtcttcggaagacgttttgatgagcgtaagctacgtacgatataagaagggt
gacggtaccttgtatgtgatgaatcagaggttggcatggatgctggaaaatagagacact
gttgctgtatcgcacaaatatgctgatattaaaacacaaaagatatcaccagctggtaag
cctaaagtgcaactgcaagtggtgctccatgatggaacatgttccacattccactttgtc
aaccctgcgggccctgaagcacaggctaaggaccgggaccaggtgaaaggcttgctggtg
aatctgttacctaagtttaagaggcaaattgatggagaactagagatgaagtccaggctc
ttgtctcttcatccaactctgaagcatttatatgaagacttagtaatatcaaaagtgatt
aatagtgaagagtattggaacacacccactttgaaacattatactgaatctaataatatt
aagcaggaggcgggtgtttccggggcttttctagcggacatccagccccaaacagatggc
tgcaatggcctcaaatataatctcacacaggatataatagacgctatattcaaaacatat
cctgccgtcagaaagaaacatatagactatgtgcccaacaagatgactgaagcggaattc
tggactaaattctttcaatctcattattttcacagggaccgcatagcgtcatcttccagc
aaagatttatttggagaatgtgcaaaactagacgaccacgccattgcctcagctatgaag
cacaccacactggacctcacggtggatctgcctaaattcacggagcctattccactctta
cccacggaagacgaagcccccgttgagaaagataaaggcgacagcacgtccatacatagg
aatatgatcaaacgattcaaccaacattctattatggtgctcaaagctagtcaaaaaaca
aattctagtagtagtgatagcaataataaaactgcaaacaataacaataaagtggtagaa
aatggggttaaagaaacaaatggcactgctgagaagaggccagctaatgaaaaaaatgct
ttagagcccgtggacaagagaaggaggatattagagaagatacattatgaagatctagaa
gattcaaataggaatgaagatgcacaggaactgaaattatccaagattgaaaggtattta
ttaggaccgtcgtcgcaagtgaaccaatcaggttcgagtacgaatcacccgccgcctttg
tcggctctagcttcaatatgtcaggcgtggtcgagcgggcagcagtgcgcgcggccgatc
cgcgtcggcgcggcgggctgtgtggccgcgctcggcgagctcagccccggcggcgcgctc
atgcggcagcaccacgccgccgccatggcgcaactaattccggccgacgtgaaatccgag
ctgaaccggctgtacctgtccgcgggggagctgctccgcgagctgtggcgctgcttcccc
gcgcccgccgcgcccgcgcaggaggcggacagtgcgcgcgcagacaacttctacgcggcg
ctgctccgcttcaggaacgtcaagctgaggccgtttgaggagaaaatgcttcacgacctg
acaccactagcgacatcacttacgaaacacatcaaccaaatgatagatgtggcctgtacg
aagtacgcgctttggcaacaaaggcaagccaaacttcggtag
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