Cydia strobilella (spruce-seed moth): 134746145
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Entry
134746145 CDS
T10503
Name
(RefSeq) replication factor C subunit 5 isoform X1
KO
K10756
replication factor C subunit 3/5
Organism
cstb Cydia strobilella (spruce-seed moth)
Pathway
cstb03030
DNA replication
cstb03410
Base excision repair
cstb03420
Nucleotide excision repair
cstb03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
cstb00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
134746145
03410 Base excision repair
134746145
03420 Nucleotide excision repair
134746145
03430 Mismatch repair
134746145
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
cstb03032
]
134746145
03036 Chromosome and associated proteins [BR:
cstb03036
]
134746145
03400 DNA repair and recombination proteins [BR:
cstb03400
]
134746145
DNA replication proteins [BR:
cstb03032
]
Eukaryotic type
DNA Replication Elongation Factors
RFC (replication factor C)
134746145
DNA Replication Termination Factors
ELG1-RFC complex
134746145
Chromosome and associated proteins [BR:
cstb03036
]
Eukaryotic type
Sister chromatid cohesion proteins
CTF18-RFC complex
134746145
DNA repair and recombination proteins [BR:
cstb03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
RFC (replication factor C)
134746145
Check point factors
HRAD17(Rad24)-RFC complex
134746145
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rep_fac_C
AAA
DNA_pol3_delta2
Rad17
AAA_14
RCF1-5-like_lid
AAA_assoc_2
AAA_22
RuvB_N
AAA_11
DUF815
AAA_16
AAA_5
AAA_7
AAA_30
PhoH
DEAD
ResIII
AAA_19
Mg_chelatase
bpMoxR
AAA_24
Sigma54_activ_2
AAA_3
DUF4470
LisH_TPL
Motif
Other DBs
NCBI-GeneID:
134746145
NCBI-ProteinID:
XP_063536504
LinkDB
All DBs
Position
12:11949925..11960107
Genome browser
AA seq
338 aa
AA seq
DB search
MTQGDATKNLPWVEKYRPSKLEDLVSHDDIIKTINQFMKENQLPHLLFYGPPGTGKTSTI
LACAKQMYTPQQFNSMVLELNASDDRGIGIVRGQILSFASTRTIFKAGPKLIILDEADAM
TNDAQNALRRIIEKYTENVRFCIICNYLGKIIPALQSRCTRFRFAPLHAAQVMPRLREVA
AAEGVDISEDGLKALLTLSGGDMRKVLNTLQSTWLAYRRVTEDTVYTCVGHPLRSDINAI
LNWLLNENDFAACFKNIQDLKIAKGLALSDILTEVHTVIQRMKLPPEVLVSLLIKMSDAE
ARLASGCSERIELAALIAAFQVARDQVKLDQVQVQAEQ
NT seq
1017 nt
NT seq
+upstream
nt +downstream
nt
atgactcaaggcgacgctacgaaaaacttgccttgggttgaaaaatatcgtccgtctaaa
ctagaagacttagtatctcacgatgatattatcaaaacaatcaaccagtttatgaaggag
aaccagttaccacatttactgttctacggcccccctggaactggcaagacatctacgatt
ctagcatgtgccaaacaaatgtatactcctcagcaattcaattctatggtgttagagttg
aatgcatcagatgacagaggcataggtattgtgcgaggacagatactgagttttgcctcc
actagaactattttcaaagctgggccaaagttgataatcctggatgaagcagatgccatg
accaatgatgcacagaatgcacttcgcagaataatcgagaagtacacggagaacgtgcgt
ttctgcataatctgcaactacctcggcaagatcatcccggcgctgcagtcgcgatgcacg
cggttccgcttcgcgccgctgcacgccgcgcaggtcatgccgcgcctacgcgaagtcgca
gctgctgagggtgtggatatatcagaagacggactaaaggcgctgctcacactctccggc
ggcgacatgcgtaaagtcctcaacacacttcaaagcacgtggctcgcgtaccgccgcgtt
acggaagacactgtatacacttgcgttggtcacccgctgcggtctgacatcaacgcgatt
ctcaactggctgctcaatgagaatgacttcgcggcgtgctttaagaatatacaggatctc
aagatagcaaaaggcttggctctcagtgatatattgacagaagttcatacggttatacaa
agaatgaagttgcccccggaggtgctcgtgtccctgctgatcaagatgtcggacgcggag
gcgcgcctcgccagcggctgcagcgagcgcatcgagctcgccgcgctcatcgccgccttc
caggtggcccgggatcaagtcaaactcgaccaagtgcaagtgcaggctgaacaatag
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