Cydia strobilella (spruce-seed moth): 134746223
Help
Entry
134746223 CDS
T10503
Name
(RefSeq) transcription elongation factor SPT6
KO
K11292
transcription elongation factor SPT6
Organism
cstb Cydia strobilella (spruce-seed moth)
Brite
KEGG Orthology (KO) [BR:
cstb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cstb03021
]
134746223
03036 Chromosome and associated proteins [BR:
cstb03036
]
134746223
Transcription machinery [BR:
cstb03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription elongation factors
134746223
Chromosome and associated proteins [BR:
cstb03036
]
Eukaryotic type
Nucleosome assembly factors
Histone chaperones
Other Histone chaperones and regulators
134746223
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SH2_2
HHH_7
YqgF
HTH_44
SPT6_acidic
S1
HHH_3
SH2
Spt6_S1
HHH_9
Tex_central_region
S1_RRP5
Tex_N
OB_RRP5_4th
DUF2167
Motif
Other DBs
NCBI-GeneID:
134746223
NCBI-ProteinID:
XP_063536619
LinkDB
All DBs
Position
12:13673954..13696162
Genome browser
AA seq
1702 aa
AA seq
DB search
MADFLESEAEESEVESDDEQPAERKKPKRKAAVQSDDEEEDEEDDEDRLREELKDLIDDA
PIDEDSDGEDSDASAGPKKRKKSDDELDDRLEDEDYDLIEENLGVKVARNKFKRLRRLED
DDSDNEGADDPELEREVIAEKLFVAGSDEEDENRSESAAPREVEYDEEGEEGESDADDFI
VDDDGKPIAKKKRKPIFTDASLQEGQDIFGVDFDYDEFDKYGDEDSEEDEEEDLDQYISD
DEEEGERKRTKKGKAKRPSKKSIFEIYEPSELKRSHFTDLDNEIRKTDIPERMQIREVPI
TPVAEGSSELEDEAEWIYKQAFLKPPVSKADSQESRERTRRGPSTVVKIRQALDFMRNQT
LEVPFIAFYRKEYVQPELSINDLWKVYKYDAKWCQLKQRKENLLKLLENMREFQLDKVML
NPDAPIPENMRLIKDEDIDRLKSVQSPEELRDVHTHFLLYYSSDLPEMQKVQRTKEKKRE
IEEKKRAARAEAERNGEDPEEAAASVEAMPDEEDVIEVKYAARSGPYELCRRAGIDGLVK
MFGLTPEQFAENVRDNYQRHEVEQQPIPPLEAAAPFVGASGSAQEVLRRAVYMCGVQLAR
EPQLRGTLRDALRERATVSAKPTARGLKEIDESHACYNMKYLKKKPVRDLTGDQFLRLTM
AAEDKLLDLTISENIEGNTGPNYLEELKNLYQKDEFAATVQAWNELRAEAVTIAFSKIVM
PEMRRELNALLLQESKEYVLKCCRRKLYDWLKVAPYESRVSDDDDEEWDTNNGLRVVSIA
YVPDRQHSAFACLCAGGGEVADHLRLPHLLYRRNAWDAMERLNKEADMTALRRFILRKKP
HVIVIGGESREALNIKADVIEVVQQLVEDEQFPRIPVEIADNHISKIYSNSLRGRNDFRE
YPEILREAICQARLLQDPLMEISTLCGHDEEILCFRYHPLQDQIAKEDLLEGIELEFVNR
VNEVGVDVNEAILTGRGTELLQFVCGLGPRKAQALIKLFKQTNQKLENRTQLVTFCHMGP
KVFINCSGFITIDTSSLGDSTEAYIEVLDGSRVHPETYEWARKMAVDALEYEDEDANPAG
ALEEILEAPERLKDLDLDAFAEELERQGFGNKSITLYDIRAELNSRYKDLRVPYRSPTPE
ELFDILTKETPETFFVGKMVLASVVGITHRKPQREMLDQANPVRNDETGLWECPFCHKND
FPELSEVWNHFDAGACPGQATGVRIRLDNGLSGYIHIKNLSDRHVADPTERVRIGQTVHC
RILKIDVERFSVDCSSKSSDLLDKNNEWRPSKDPYYDQEAEDKDVRKDKETKQTKERMQY
VKRVIVHPAFHNISFAEAEKLMENMAQGEVIVRPSSKGSDHLTVTWKVADSICQHIDVRE
EGKENAFSLGRSLWIQGSEFEDLDEIIARYVTPMAGHARDLISYKYYKPLGGMRDKAEEI
LKEDKSKNPNKIHYVISAAKNHPGRFLLSYLPRARCTHEYVSVTPDGYKFRQRMFDSLGG
LLKWFKEHFRDPPPHGTPAARTPAMRTPHGMSSMYHTPAAHTPAFHTPAHTPGPAYINTP
YTPSAQTPYMTPFATTPRQPDFLTPAVIPRHKPAPVPVYQEPSDWQKAAEDWVRHRTVRD
TPSTPRSSEGMSTPRQSSRTPRMDSRSTPRHDSRTPRHDSRSTPRSHSGRQSRAQSVRST
PQTNTSPRSMSLGDATPLYDEN
NT seq
5109 nt
NT seq
+upstream
nt +downstream
nt
atggcagattttctggaatctgaagcggaggagagcgaggttgaatccgatgacgagcaa
ccagcagagcgcaaaaagccaaagcgtaaagctgcagtccagagtgatgatgaggaggag
gatgaagaagatgatgaagacagactcagagaagagttaaaagatttgatagacgacgca
cctatagacgaggacagtgacggggaggactcggatgccagcgcagggccaaaaaaaaga
aaaaaaagtgatgacgaactggatgataggctagaggatgaagattatgatctcattgag
gagaatcttggtgtaaaagttgctaggaataaattcaagcgtctgcgccgtttggaagac
gacgacagcgacaatgaaggagctgatgaccctgagctggagagagaagtcattgccgag
aagctgtttgttgctggctctgatgaggaggatgagaaccggtccgagtccgcagcccct
cgggaagtggaatacgacgaggagggcgaggaaggtgaatcagacgccgacgatttcatc
gtcgacgacgacggcaagcccatcgctaagaagaaacggaaacctatatttactgatgcg
tctttacaagaaggccaggacatattcggcgtagatttcgactacgacgagttcgacaag
tatggcgacgaggattcagaagaggacgaggaggaggacttggaccagtatatttctgac
gacgaggaggaaggtgaaaggaaacgcacaaagaaaggcaaggccaagcgtccaagcaag
aaatctatcttcgaaatatacgagcctagcgaactcaagagaagccacttcacagacctg
gataatgagatccgcaaaaccgacattccggagcgcatgcaaatccgcgaggtgcccatc
acccccgtggccgagggcagctctgaactggaagacgaggccgaatggatatacaagcag
gccttcctcaagccacccgtctcgaaagcggactcgcaggagtcccgcgaaaggactcga
cggggcccaagcaccgtggttaagatccgacaggcgctggacttcatgagaaatcagacg
ctggaagttccgttcatagcgttttaccgcaaggaatacgtgcaaccggagcttagtatc
aatgatctttggaaggtctacaagtatgatgctaagtggtgccagctaaaacagcgcaag
gagaacctcctcaagctgctggagaacatgcgagagttccagctggacaaggtgatgctg
aaccccgacgcgcccatacccgagaacatgaggctcatcaaggatgaggacatcgacagg
ctaaagagcgtgcaatcaccagaagagctccgcgacgtgcacacacacttcctgctctac
tattccagcgacctgcccgagatgcagaaagtgcagcgtactaaggagaagaagcgggaa
atcgaggagaaaaaacgagcagctcgcgcggaggccgagcgcaacggtgaggatcccgaa
gaggccgccgcgagcgttgaagccatgcctgatgaagaagatgtcatcgaagtgaaatac
gcagcgcgctccggcccttatgagctgtgccgtcgcgctggcatcgatggcctcgtgaaa
atgttcggtctgacgcctgagcagtttgcggagaacgtgcgagacaactaccaacggcat
gaggttgagcagcaacccataccgccgctggaggctgccgcaccttttgtgggtgccagt
gggtcagcgcaagaagttctacggcgggcggtgtacatgtgcggagtacagctggcacgc
gagccgcaactccggggaacgttgcgagatgcgctccgtgaacgagccactgtatcggcg
aagcctactgcccgcggtctgaaggagatcgatgagagtcacgcgtgctacaatatgaaa
tacctgaagaagaagccagtccgcgacctgacgggcgaccagttcctgcgactgaccatg
gcggcagaagacaaattgctagacctcaccatcagcgagaacatcgagggtaacactggg
ccaaactatcttgaggaactcaaaaatttgtatcaaaaggacgagtttgcggcaacggtg
caggcgtggaatgagctgcgcgccgaggccgtgaccatcgccttctccaagatcgtgatg
cccgagatgcggcgcgaactcaacgccctgctgctgcaggagtccaaggaatacgtgctc
aagtgttgtcggcggaaattatacgactggttgaaagtggcgccgtacgagtcgagagtt
tcggatgacgacgacgaagaatgggacaccaataatggcctccgagtggtctccatcgcg
tacgtgccggaccggcagcactccgcgttcgcgtgcctgtgcgcgggcggcggcgaggtg
gccgaccacctgcgcctgccgcacctgctgtaccgccgcaacgcctgggacgccatggag
cggctcaacaaggaggccgacatgaccgcgctgcgaagattcatcctccgcaagaaaccg
catgtgatagttatcggcggcgaatcccgcgaggcgctgaacatcaaagcggacgtcatc
gaggtggttcagcagctggtcgaagacgaacagttcccgcgtatacccgtggagatagct
gataaccacatcagcaagatctacagcaacagtttgcgcggaaggaatgacttcagagaa
tatccagaaatcctccgcgaagccatctgccaagcgcgccttcttcaagatccgttgatg
gagatctctacactgtgtgggcacgacgaggagatactgtgcttccggtaccatccgctg
caggaccagatcgctaaggaagacctgctcgagggcatcgagctggagttcgtcaacagg
gtgaacgaagtcggcgttgacgtaaacgaggccattctaacgggcagaggtacggaactg
cttcagttcgtatgcggtctgggaccaagaaaagcccaagccctaattaaactcttcaaa
caaaccaaccagaagttagagaacagaacacaactcgtcacattctgccatatgggacct
aaagtattcatcaactgctcgggtttcatcacaattgacacaagcagcttaggagacagt
acggaagcgtacatagaagttctagacggttccagagtacacccagaaacgtatgagtgg
gcgcggaaaatggcagtagacgctttagaatatgaggacgaagatgccaacccagccggt
gctttagaagaaattttagaagcccctgagaggctaaaagatctagacttggatgcgttt
gctgaagagttagaacgacaaggcttcggtaataagagcataaccctatacgatatacga
gcggaattgaactctaggtacaaggatcttagggtgccttatcgctcgccgacgcccgag
gaactgttcgacatcttgaccaaagagactcccgaaacattcttcgtaggtaaaatggtg
ctggcttctgttgtggggatcacgcacaggaaacctcagagagaaatgctcgatcaggct
aatccagtgaggaatgatgagaccgggctctgggagtgtccattctgtcataaaaacgat
ttcccagagttgtcagaggtgtggaatcatttcgacgcaggcgcttgcccgggccaggcc
acgggggtccgcatccggctcgacaacggtctctcgggctacatccacataaagaacctc
tcagacagacacgtggcagacccgaccgaacgcgtgcgcattggccagaccgtacattgt
aggatcttgaagattgacgtagagcggttctctgtggattgctcgagtaaatcgtcggat
ttgttggataaaaataacgaatggaggccttcaaaagacccatactatgaccaagaagct
gaagacaaagacgtgcgcaaagacaaagagacgaaacaaacaaaagagcggatgcaatac
gtgaagagagtcatcgtccacccggccttccacaacatctcgttcgcggaggccgagaaa
ctgatggagaacatggcgcagggagaggtcatcgtgcgaccgagtagcaaggggtctgac
catctcacagttacgtggaaggtagccgatagcatctgtcaacacattgacgttcgagag
gagggcaaagaaaatgctttctcgttaggccgaagtctctggattcaaggctctgaattc
gaggatctcgatgaaatcatcgcgcgctacgtcactcccatggccggtcacgcgcgcgac
ctcatctcctacaagtactacaaaccgctcggtggaatgcgagacaaagccgaggaaata
ctcaaagaggacaaatcaaagaaccccaacaagatacactacgtgatatcggcggcgaag
aaccatccaggtagattcctactgtcttatctacctcgagcgcgctgcacgcacgaatac
gtgtcggtgactccagatggttacaaatttaggcagaggatgttcgactctctaggaggt
ttgctcaaatggtttaaggagcactttagggatcctccgccccacggcacgccggcagcg
cgcactcccgccatgagaacgccgcacggaatgtcctccatgtaccacacacccgccgcg
cacacgcccgcgttccacacccccgcacacacacccgggcccgcgtacatcaacactccc
tacacgccgtccgctcaaactccgtacatgacgccgttcgcgaccacacccaggcaacca
gacttcctgacgcccgcggtgattccccgccacaaaccggcgccggtgccggtttaccag
gagccatccgattggcagaaggcggccgaggactgggtgcggcataggaccgtgcgcgac
accccgtcgacgccccgcagcagcgaaggcatgtccactccgcgacagtcgagccgcacg
ccccgcatggactcccgctcgacgccccgccacgactcccgcacgccccgccacgactct
agaagcaccccgcggtcgcactcgggcagacagtcgcgcgcgcagtcggtgcgctcgacg
ccgcagaccaacacgtcgccgcggtcgatgtcgctcggcgacgccaccccgttgtacgac
gagaactaa
DBGET
integrated database retrieval system
