Cydia strobilella (spruce-seed moth): 134746295
Help
Entry
134746295 CDS
T10503
Name
(RefSeq) CCR4-NOT transcription complex subunit 3 isoform X1
KO
K12580
CCR4-NOT transcription complex subunit 3
Organism
cstb Cydia strobilella (spruce-seed moth)
Pathway
cstb03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
cstb00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
134746295
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cstb03019
]
134746295
Messenger RNA biogenesis [BR:
cstb03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
134746295
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
134746295
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Not3
NOT2_3_5_C
Spectrin_Anc-1
Motif
Other DBs
NCBI-GeneID:
134746295
NCBI-ProteinID:
XP_063536735
LinkDB
All DBs
Position
12:complement(15946267..15981556)
Genome browser
AA seq
712 aa
AA seq
DB search
MAAGTEFNKKEEELSDKRGEIDRCLKKVTEGVETFEDIWQKVHNATNSNQKEKYEADLKK
EIKKLQRLRDQIKSWIASGEIKDKSTLLEYRKLIETQMERFKVVERETKTKAYSKEGLGA
AQKLDPAQKERDEMSAWLIQSIDALNLQVDQFESEIESLLVGKKKRLDKEKQDRMEELKQ
KLEKHRFHIKKLETLLRMLDNMSVEVEQIKRIKDDVEYYIDSYLEPGFEENEYIYDDING
LDEIELSGVGLPSSATTDSNSNESNGSPTSIISGTSPIPSPTFEVHNHSTDSIDIEKKKK
EEVIAKPVKPLPLRAASSAVSNSTSLVSSLLNNSAASTNSINNTGVSGASTPNKQPPPPS
PPHSHPHPAHPHPHPHPAHPHRQPNNTALALAEYLPAEAPSPAPAHAPAPAHAPAPAPAP
APAPAPAPEPRVYSAKIVENGPLPAAPHPAHPAQPAPAPPPPTSKSSIAPAPSVPTEPAV
SPLTVNGPLHHHPHTPQHTVNNGRGEATTPLLAGAGGTASLKSMAQEAVQRAGLTTQGQT
VRRGAALAQAHIPPLLGVAPLGPLPLNSDHQLQFQMMESSFYHMPHPSDSERARHYLPRN
ICQTPQYYNQVVVPHSDSVEFFQRLSTETLFFVFYYMEGSKAQYLAAKALKKQSWRFHTK
YMMWFQRHEEPKLINEEYEQGTYIYFDYEKWGQRKKEGFTFEYKYLEDRDLN
NT seq
2139 nt
NT seq
+upstream
nt +downstream
nt
atggctgctggcacagaatttaacaagaaagaggaggaattatcggataaacgtggtgaa
atagacaggtgtttaaaaaaggtaacggaaggggtggagacgtttgaggacatttggcag
aaggttcacaatgccactaacagtaaccagaaggagaagtatgaggcagatctcaagaag
gaaattaagaaactccagaggttacgagatcaaatcaagtcttggatcgcctccggagag
attaaggataagagtacacttttagaatataggaaactaatagaaacgcaaatggaaagg
ttcaaagtagtggaacgggagacgaagacgaaggcgtactcgaaggagggcctcggagcc
gctcagaagctggaccccgcgcagaaggaacgagacgagatgtccgcgtggctcattcag
tccatcgacgcgctcaatttacaggttgatcagttcgagtcagagatcgagtcgctgctg
gtcggcaaaaagaagcggctggacaaagagaagcaggatcgcatggaggagctcaaacag
aagctagagaagcaccgcttccacatcaagaagctcgaaaccctgctgcgcatgctagac
aacatgtccgttgaagttgaacagataaaaagaatcaaagacgacgtagaatactacata
gactcatacttagaacccggcttcgaagagaacgagtacatatatgacgacatcaacggt
ttggacgaaatagaactcagcggcgtcgggctaccatcctccgcgactacagactctaat
agcaacgagtcaaacggctcgcccactagcattatatcaggaacaagtcccattccgtct
cccacgttcgaagtccacaaccactccacagattccatagacattgagaagaaaaagaaa
gaagaggtcatagcgaaaccggtaaagcccctgccgctgcgggcggcgagcagcgcggtc
agtaatagcacgtctctcgttagttccttgctcaataactccgccgcctccaccaatagc
ataaacaacacgggcgtgtcgggcgcctccacgcccaacaagcagccgccgccgcccagc
ccgccgcattcgcatccgcaccctgcgcatccgcatccgcatccgcaccccgcgcatccg
caccggcagcctaacaacactgccttggcgctggcggagtacttgcccgcggaggctccc
tcgcctgcgcccgcgcatgcgcctgcgcctgcgcatgcgccggcgcccgccccggcgccc
gcgcctgcgcccgcgcccgcgcccgagccgcgcgtctacagcgccaaaatagtggagaac
ggccccctccccgccgcgccgcaccccgcgcaccccgcgcagcccgcgcccgcgccgccg
ccgccgacgtcaaagagttccatcgcaccagcgcccagtgttcccacggaacccgccgtg
tcccctctcacagtcaacggccccctccaccaccatccacacacgccgcaacacacagtc
aataatgggcgaggagaggcgaccacgccgctactggcgggcgcgggcggcaccgcgtcg
ctcaagagcatggcgcaggaggccgtccagcgtgcggggctaaccacacaaggacaaacc
gtgcggcgaggcgcggcgctggcgcaggcgcacatcccgccgctactcggggtcgcgcca
ctcggcccgctacctctcaactcggaccaccagctacagttccagatgatggagtcgtcg
ttctaccacatgccgcaccccagcgactcggaaagagcacgacattacctgccccgcaac
atctgccagactccacagtactacaaccaggtggtagtcccccattcagacagcgtggaa
ttcttccagcgattatcgacagagactttattcttcgtgttctactacatggagggcagc
aaggcgcagtacctggccgccaaggcgctcaagaagcagagctggcgcttccacaccaag
tacatgatgtggttccagcggcacgaggagcccaagctcatcaacgaggagtacgagcag
ggtacgtacatctacttcgactacgagaagtggggccagcgcaagaaggagggcttcacg
ttcgaatacaagtacttagaggaccgagacctgaactga
DBGET
integrated database retrieval system
