Cydia strobilella (spruce-seed moth): 134746460
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Entry
134746460 CDS
T10503
Name
(RefSeq) DNA-directed RNA polymerase, mitochondrial
KO
K10908
DNA-directed RNA polymerase, mitochondrial [EC:
2.7.7.6
]
Organism
cstb Cydia strobilella (spruce-seed moth)
Brite
KEGG Orthology (KO) [BR:
cstb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03029 Mitochondrial biogenesis [BR:
cstb03029
]
134746460
Enzymes [BR:
cstb01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
134746460
Mitochondrial biogenesis [BR:
cstb03029
]
Mitochondrial DNA transcription, translation, and replication factors
Mitochondrial transcription and translation factors
Mitochondrial RNA polymerase
134746460
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol
RPOL_N
PPR_2
PPR_3
PPR
PPR_1
Motif
Other DBs
NCBI-GeneID:
134746460
NCBI-ProteinID:
XP_063536918
LinkDB
All DBs
Position
13:complement(4799433..4824220)
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AA seq
1392 aa
AA seq
DB search
MHRLISARNLYQTSLHNISLPSNTALNRSPDIKCAFCRKILLGQHNIENLLVARHQSTRF
ANALKAVKKKGKHKIYKKYGELLEVGNQAMTETKVSISKLRAVHLSKLADSPVSLGQLHQ
LTTKPSKKPTIAEVDPELLQSVKEKILKKSAPISTHINISSGPKEISLEDDKCALVYTHH
KISSLEDRLKTKQYIDSVKESYYNFRKATIYDQRLQDLRYAITEGLTQEFDMLTPDSKLE
EMPLQPLPKSPHSVFRELFIDNQMDSYDQEMLNSFSSLQSQGLAHPAIEDIYDDAALHNE
MHEPHDLEFGQREAALEVKRLNVKKAKQAIKQKKKAKLEKRRAKQEINMKTDMKQLELQG
KQEALERLLAAHLHLLCSLNMVQEARKVLQYYRQRGAKVPDHPKITDIKVYNTLLHGYAF
MGLLDQTKELLTSMATDGIAPNAQTYAATFECVERSNVKDKEPVLQHYYEQMQEKGITLN
DLLDKTQFVHDQRELIFRAVRRLHPSFTPHYTPPVLDYDCSLTEKLKLNEIHNRYGLLTS
PAEGLMTLEEVKERGRRQLETEIKGDIEVQNIDVKDDASPTVKLYREKLQATEAEWRSVV
RESFERNLGTLRSQSLASHSAIALYPYLRVLETEQFVDLIMGEINKLVDGSETYSPTLKL
LQRDLGTQVYHKYQVEQYRKNGVLSKISKIYEQYCEWYMDRSALGTDLPMNSRQAWQMLV
HRNREGASLDMEETPWPMEMRQNIGKFLYNIIINDVKIDVNMFKPKAKQKKLPAVYKVHR
PWGRLVRLELKPHPALARLWLGAARAELRMRADLVPPSSPPKPWPHLHSGAYLLTKTPLI
RMPFYIMNQWKRLEDSPPSALYPALDSLNQLGEVPWVVNKPVLDLQLQIFRSGGNKKLDI
PPPASALNPREFADARDAAGAFKRRVALNRARAEMHSLWCDALYKLALANHYRDEIFWLP
HNMDFRGRVYACPPHLSQLGADAYRALLKFARKEPLGPDGLRWLKLHAVNLTGTMKKSTV
DERLEYAESILDKILDSADHPLDGEGWWQASEEPWQTLACCMEIANAIRSPNPEEYPCGF
PVHQDGSCNGLQHYAALGGDAAGAAAVNLAPRDRPQDVYASVCALVEEMRTRDAAAGVPA
AIILENFVRRKVIKQTVMTTVYGVTRFGARLQIAKQLKDIDEFPKEHVWSCSQYLTTKTF
DSLREMFTSTKLIQDWFTDCAKLISGICGESVEWVTPLGLPVVQPYYRRGTTAANSRTPL
DHQQRPCTMKQRNAFPPNFIHSLDSSHMMLTSLHCQAAAVTFVSVHDCYWTHPGAVPLMN
KICREQFVALHSQPILEDLSDFLVKRYSYDESELEGTLGAPNKKRVNSLLKKVPSKGDFK
LDSVLDSIYFFS
NT seq
4179 nt
NT seq
+upstream
nt +downstream
nt
atgcatcgactgatatcagccagaaatttgtaccaaacaagccttcataatatttcctta
ccttcaaatacagctctcaatagaagtcctgatataaaatgtgccttttgtcggaaaatt
cttctaggtcaacacaatatagaaaacttactcgtcgccaggcaccagtctacgagattc
gctaatgccttgaaagcggtcaagaagaaagggaaacataaaatttataagaaatatgga
gagctattggaggttggcaatcaagcaatgactgaaaccaaagtgtctataagtaaattg
cgtgccgtccatctctccaaactggctgacagcccggtatcactgggccagctgcaccag
ctaaccacaaaaccatccaagaagcccaccattgctgaagtagacccagagctgcttcag
agtgtcaaagaaaaaatattaaagaaatctgcaccaatatcaacacatataaacatatct
tcaggtccaaaagagataagtctagaggatgacaaatgtgccctagtttacactcatcac
aaaatttctagtttggaagacagattaaaaactaaacagtacatagactctgttaaagag
agttattataactttagaaaagctactatttatgaccagaggttgcaggatttgaggtat
gccatcaccgaaggtctcacacaggagtttgacatgctcaccccagattccaagttggag
gagatgcccctccagccactgccaaagagcccacattctgtgtttagggaactgtttatt
gataaccaaatggattcctatgaccaggagatgctcaattccttttcaagtttacaaagc
cagggcttagcccaccccgccatagaagatatctatgacgacgcagcgttacacaacgag
atgcacgagccgcacgacctcgagttcgggcagagagaggcagcccttgaagtcaagagg
cttaatgtcaaaaaggctaaacaagcaataaaacaaaagaaaaaggccaagttagagaag
cgtagagctaagcaagaaatcaatatgaagactgacatgaaacagttagagctgcaaggc
aagcaggaggctcttgagcgtttgcttgctgctcatttacatctgttgtgctcactcaac
atggtgcaggaggcccgcaaagttctacagtattatcggcagcggggagctaaggtgccg
gaccatccaaaaatcactgacatcaaagtgtacaacacacttctacacggatacgcgttc
atgggactcctggaccaaacgaaggagttgttaacatcaatggcgacggacggcatcgcg
ccgaacgcgcagacttacgccgccacctttgaatgcgtcgagagaagcaacgtcaaagat
aaagagcccgtattgcagcactactatgagcagatgcaggaaaagggaataaccctaaac
gacttactagacaaaacacaattcgtccacgaccaacgcgagctaatattccgcgccgtc
cgccgcttgcatccctccttcaccccccactacaccccccctgtcctcgactacgactgc
tccctcacggaaaaactcaagttaaacgagatacacaaccgctatgggttgttgacctcg
ccagctgaggggttgatgaccttggaggaggtaaaggagagagggagacggcagctggag
actgagattaagggggatattgaggtgcagaatattgatgttaaggatgacgcgtcaccg
actgttaagttatatcgagagaaactccaggcaaccgaagcagaatggagatcggtcgtg
cgcgagtcgttcgagcgcaacctcggtacgctgcgctcgcagagcctcgcctcgcattcg
gccatcgctctgtacccttacctgagggtgctagagacggagcaattcgtggatctcata
atgggtgagatcaacaaattggtggacggcagtgagacctacagccccacgctgaagctg
ctgcagcgtgacctgggcacgcaggtgtaccacaaataccaagtagaacagtaccgtaag
aacggtgtgctgtcgaaaatctccaaaatttacgagcaatactgcgaatggtacatggat
cgcagcgcgctgggcaccgacttaccgatgaacagtcggcaggcgtggcaaatgctggtg
catagaaacagagaaggagctagtttggacatggaggagacgccgtggccgatggagatg
cggcagaacatcggcaagttcctctacaacatcatcatcaacgacgtcaagatcgacgtc
aacatgttcaaacccaaagccaagcagaaaaaactcccagccgtttacaaagtccaccgt
ccctggggccgcctcgtgcgcctggagctgaagccgcacccggcgctggcgcggctctgg
ctgggcgccgcgcgcgccgagctgcgcatgcgcgccgacctggtgccgccatcctcgccg
cccaaaccgtggccgcatctacattctggggcgtatctactgactaaaacaccgcttatt
agaatgccattctacatcatgaaccaatggaaacgactagaagattcgcccccgtccgcg
ctgtacccggctttagacagcctcaatcagctcggagaagtgccgtgggtcgtcaacaag
cccgtgctggacttacaacttcaaatatttagatctggcggcaacaagaagttggacatc
cctccccccgcgtcggcgctgaacccgcgcgagttcgcggacgcgcgggacgcggcgggc
gccttcaagcgtcgcgtggcgctcaaccgcgctcgcgccgagatgcactcgctgtggtgc
gatgcgctctacaagcttgcactcgctaatcattacagggacgagatcttctggctgccc
cacaacatggatttccgcgggcgcgtgtacgcctgcccgccacacttgtcccagctcggg
gccgacgcgtaccgagctctgctaaagtttgcaagaaaagagccgctgggacccgatgga
ttgagatggcttaaactacatgctgttaacctgaccgggacgatgaagaaaagcaccgtg
gatgagaggttggaatacgcggaaagcatcttagacaagatactggactcggccgatcat
cctcttgacggcgagggctggtggcaggcctccgaagaaccctggcagacactggcatgt
tgtatggaaatcgccaacgcgatccgatctccaaaccctgaagagtacccgtgcgggttc
ccggtgcaccaggacgggtcgtgcaacgggctgcagcactacgcggcgctcggcggcgac
gcggccggcgccgccgccgtcaacctggcgccgagagaccgcccgcaagacgtctatgcc
tcggtgtgcgcactggtggaggagatgaggacgcgcgacgcggcggcgggcgtgccggcg
gccatcatcttggagaattttgtgcgaagaaaagttatcaagcagactgttatgaccact
gtgtatggagttacgaggttcggggcgaggttacaaatcgctaaacagctcaaagatatt
gacgagtttcctaaggagcacgtgtggtcgtgcagtcagtacctgaccacgaagaccttc
gacagcctccgcgagatgttcacctccaccaaactcatccaagattggtttaccgactgc
gccaagctgatctcaggcatatgtggagagagcgtagagtgggtgacgccgctaggactc
ccagtggtgcagccttactaccgccgcggcaccaccgctgctaacagccggacgccgctt
gaccaccaacaacgtccatgcaccatgaagcagcggaacgcattcccgcccaacttcatc
cactccctggactcgtcgcacatgatgctgacctccctgcactgccaggctgccgccgtc
accttcgtgtccgtgcacgactgctactggacgcaccccggagccgtcccgctcatgaac
aagatttgccgagagcagttcgtagctctgcattcgcagccgattcttgaagacttatcg
gactttctggtcaagcgatacagctacgatgaaagcgagcttgaaggcacgttgggagcg
ccgaacaagaaacgcgtcaacagtttgctgaagaaagtccccagcaagggcgacttcaag
ttggatagtgtactcgattccatctacttcttcagctag
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